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CmoCh12G004860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like
Genome locationCmo_Chr12:2989009..2989254
RNA-Seq ExpressionCmoCh12G004860
SyntenyCmoCh12G004860
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.0e-2567.5Show/hide
Query:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC
        ++LSRE+IKEIFREHDIDGDG+LS+ E++KAFGF G +LP++KAHYGMA AD +GDG I+E+EL++LVDYAE+FQ++++C
Subjt:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]7.6e-2566.25Show/hide
Query:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC
        ++LSRE+IKEIFREHDIDGDG+LSM+E++KAFG  G +LP++KAHYGMA AD +GDG I+E+EL++LVDYA++FQ++++C
Subjt:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC

KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]1.4e-2371.05Show/hide
Query:  SREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR
        SREE+KEIFREHDIDGDG LS+ E++KA GFLG  +P++KAHYGMA  D +GDGLI EDEL++L+DYAERFQ R+R
Subjt:  SREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]7.6e-2566.25Show/hide
Query:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC
        ++LSRE+IKEIFREHDIDGDG+LSM+E++KAFG  G +LP++KAHYGMA AD +GDG I+E+EL++LVDYA++FQ++++C
Subjt:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC

XP_023002888.1 calmodulin-like [Cucurbita maxima]1.2e-2268.35Show/hide
Query:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR
        M+LSR +IKEIF EHDIDGDG LS+ E+ KAF F G ++P +KAHYG+A ADADGDGLI E+ELE+LVDYAER   +KR
Subjt:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein7.0e-2471.05Show/hide
Query:  SREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR
        SREE+KEIFREHDIDGDG LS+ E++KA GFLG  +P++KAHYGMA  D +GDGLI EDEL++L+DYAERFQ R+R
Subjt:  SREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR

A0A0A0LRC1 Uncharacterized protein3.7e-2566.25Show/hide
Query:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC
        ++LSRE+IKEIFREHDIDGDG+LSM+E++KAFG  G +LP++KAHYGMA AD +GDG I+E+EL++LVDYA++FQ++++C
Subjt:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC

A0A5A7UYC0 Putative calcium-binding protein CML109.7e-2667.5Show/hide
Query:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC
        ++LSRE+IKEIFREHDIDGDG+LS+ E++KAFGF G +LP++KAHYGMA AD +GDG I+E+EL++LVDYAE+FQ++++C
Subjt:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRC

A0A6J1GK16 calmodulin-like5.9e-2368.35Show/hide
Query:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR
        M+LSR +IKEIF EHDIDGDG LS+ E+ KAF F G ++P +KAHYG+A ADADGDGLI E+ELE+LVDYAER   +KR
Subjt:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR

A0A6J1KUW2 calmodulin-like5.9e-2368.35Show/hide
Query:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR
        M+LSR +IKEIF EHDIDGDG LS+ E+ KAF F G ++P +KAHYG+A ADADGDGLI E+ELE+LVDYAER   +KR
Subjt:  MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR

SwissProt top hitse value%identityAlignment
Q0DZP5 Probable calcium-binding protein CML177.7e-0433.33Show/hide
Query:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALA--DADGDGLIDEDELERLVDYAER
        E++ +F   D DGDG+++  E+ ++   LG  +P H+      +A  DA+GDG +D DE  +L +   R
Subjt:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALA--DADGDGLIDEDELERLVDYAER

Q8RYJ9 Putative calcium-binding protein CML234.8e-0640.85Show/hide
Query:  LSREEIKEIFREHDIDGDGQLSMHEV-MKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAE
        ++ +E + +F   D DGDG++S  E+ +     LG  +P  +    MALAD DGDGL+DE+E  RLV   E
Subjt:  LSREEIKEIFREHDIDGDGQLSMHEV-MKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAE

Q8RZB5 Probable calcium-binding protein CML101.6e-0441.94Show/hide
Query:  EEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERL
        EE++ +FR+ D +GDG++S  E+   F  LG      +    MA ADADGDG I  DE   L
Subjt:  EEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERL

Q9SRE6 Calcium-binding protein CML381.6e-0435.48Show/hide
Query:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLV
        E++ +F   D + DG++S  E+ K+F  LG  L   +A   + L+D DGDG++D +E  +L+
Subjt:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLV

Q9SRE7 Calcium-binding protein CML394.5e-0428.77Show/hide
Query:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR
        +++ +F   D + DG++S  E+ K+F  LG  +   +A   + L+D DGDG++D +E   L+   + F   ++
Subjt:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein3.2e-0528.77Show/hide
Query:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR
        +++ +F   D + DG++S  E+ K+F  LG  +   +A   + L+D DGDG++D +E   L+   + F   ++
Subjt:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKR

AT1G76650.1 calmodulin-like 381.1e-0535.48Show/hide
Query:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLV
        E++ +F   D + DG++S  E+ K+F  LG  L   +A   + L+D DGDG++D +E  +L+
Subjt:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLV

AT1G76650.3 calmodulin-like 381.1e-0535.48Show/hide
Query:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLV
        E++ +F   D + DG++S  E+ K+F  LG  L   +A   + L+D DGDG++D +E  +L+
Subjt:  EIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLV

AT2G43290.1 Calcium-binding EF-hand family protein7.2e-0533.33Show/hide
Query:  RLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERL
        R+   E+K +F+  D +GDG+++  E+  +   LG  +P       +   DA+GDG +D DE E L
Subjt:  RLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERL

AT3G50770.1 calmodulin-like 419.3e-0530.77Show/hide
Query:  SREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLV
        S+EE++++F   D DGDG++S  E+   FG +G  + +  A   +   D D DG +  ++   L+
Subjt:  SREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGACTCTCTCGAGAGGAGATCAAGGAGATCTTCAGAGAGCATGACATCGATGGAGATGGTCAGCTTTCCATGCACGAGGTGATGAAGGCATTTGGGTTCCTCGGCTG
CATGCTTCCTTACCACAAAGCTCACTATGGCATGGCTCTTGCCGATGCTGATGGCGATGGCTTGATCGACGAGGACGAGCTCGAAAGGCTCGTGGACTATGCCGAGAGGT
TCCAGAACAGGAAGCGCTGCGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGACTCTCTCGAGAGGAGATCAAGGAGATCTTCAGAGAGCATGACATCGATGGAGATGGTCAGCTTTCCATGCACGAGGTGATGAAGGCATTTGGGTTCCTCGGCTG
CATGCTTCCTTACCACAAAGCTCACTATGGCATGGCTCTTGCCGATGCTGATGGCGATGGCTTGATCGACGAGGACGAGCTCGAAAGGCTCGTGGACTATGCCGAGAGGT
TCCAGAACAGGAAGCGCTGCGGTTAA
Protein sequenceShow/hide protein sequence
MRLSREEIKEIFREHDIDGDGQLSMHEVMKAFGFLGCMLPYHKAHYGMALADADGDGLIDEDELERLVDYAERFQNRKRCG