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CmoCh12G004890 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004890
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncalmodulin-like
Genome locationCmo_Chr12:3007448..3007732
RNA-Seq ExpressionCmoCh12G004890
SyntenyCmoCh12G004890
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060886.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.7e-2168Show/hide
Query:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMR
        S+   SREEMKEIFREHDIDGDG LSI EL  A GFLG+ +P+YKAHYG+AY+D + +G I+EDELD+L+DYA R
Subjt:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMR
KAA0060892.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]1.7e-2363.22Show/hide
Query:  MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
        M+   S+L++SRE++KEIFREHDIDGDG LS+SE+  AFGF G+ILP+YKAHYG+A+AD + +G+I E+ELD+LVDYA +F H  KC
Subjt:  MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]1.1e-2262.07Show/hide
Query:  MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
        M+   +RL++SRE++KEIFREHDIDGDG LS++E+  AFG  G+ILP+YKAHYG+A+AD + +GFI E+ELD+LVDYA +F H  KC
Subjt:  MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
KGN62525.1 hypothetical protein Csa_022453 [Cucumis sativus]2.4e-2269.74Show/hide
Query:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF
        S+   SREEMKEIFREHDIDGDG LSISEL  A GFLG+ +P+YKAHYG+AY D + +G I+EDELD+L+DYA RF
Subjt:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF
XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]1.8e-2264.63Show/hide
Query:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
        +RL++SRE++KEIFREHDIDGDG LS++E+  AFG  G+ILP+YKAHYG+A+AD + +GFI E+ELD+LVDYA +F H  KC
Subjt:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
TrEMBL top hitse value%identityAlignment
A0A0A0LKX1 Uncharacterized protein1.2e-2269.74Show/hide
Query:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF
        S+   SREEMKEIFREHDIDGDG LSISEL  A GFLG+ +P+YKAHYG+AY D + +G I+EDELD+L+DYA RF
Subjt:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF
A0A0A0LRC1 Uncharacterized protein5.2e-2362.07Show/hide
Query:  MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
        M+   +RL++SRE++KEIFREHDIDGDG LS++E+  AFG  G+ILP+YKAHYG+A+AD + +GFI E+ELD+LVDYA +F H  KC
Subjt:  MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
A0A5A7UYC0 Putative calcium-binding protein CML108.1e-2463.22Show/hide
Query:  MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
        M+   S+L++SRE++KEIFREHDIDGDG LS+SE+  AFGF G+ILP+YKAHYG+A+AD + +G+I E+ELD+LVDYA +F H  KC
Subjt:  MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRF-HSPKC
A0A5A7V2Z9 Putative calcium-binding protein CML101.3e-2168Show/hide
Query:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMR
        S+   SREEMKEIFREHDIDGDG LSI EL  A GFLG+ +P+YKAHYG+AY+D + +G I+EDELD+L+DYA R
Subjt:  SRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMR
A0A6J1KUW2 calmodulin-like2.9e-2164.1Show/hide
Query:  LRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRFHSPK
        +++SR ++KEIF EHDIDGDG LS+SELT AF F G+I+P YKAHYGLAYAD D +G I+E+EL++LVDYA R +  K
Subjt:  LRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRFHSPK
SwissProt top hitse value%identityAlignment
P05933 Calmodulin6.9e-0433.85Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLV
        + EE++E F+  D DG+G +++ ELTH    LG  L   +    +  AD D +G I  +E  R++
Subjt:  SREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLV
Q8L3R2 Probable calcium-binding protein CML415.2e-0437.04Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNG
        S+EE++++F   D DGDG +S  EL H FG +G  + +  A   +   D D +G
Subjt:  SREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNG
Q9C9U8 Probable calcium-binding protein CML263.1e-0436.84Show/hide
Query:  EMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDE
        E+K++F + D +GDG +S+SEL + F  +G      + +  L   D DC+GFI ++E
Subjt:  EMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDE
Arabidopsis top hitse value%identityAlignment
AT1G73630.1 EF hand calcium-binding protein family2.2e-0536.84Show/hide
Query:  EMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDE
        E+K++F + D +GDG +S+SEL + F  +G      + +  L   D DC+GFI ++E
Subjt:  EMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDE
AT3G50770.1 calmodulin-like 413.7e-0537.04Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNG
        S+EE++++F   D DGDG +S  EL H FG +G  + +  A   +   D D +G
Subjt:  SREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNG
AT4G14640.1 calmodulin 89.2e-0433.85Show/hide
Query:  SREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLV
        + EE+KE F+  D D +G +S SEL+H    LG  L   +    +  AD D +G +  DE  +++
Subjt:  SREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCATTAAGATCCCGATTGCGGATGTCGAGAGAGGAGATGAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTTAGCATCAGTGAGCTCACCCA
CGCCTTCGGCTTCTTAGGCAATATTCTTCCATACTACAAAGCTCACTATGGTCTCGCTTATGCTGACTATGATTGTAATGGCTTTATCACTGAAGATGAGCTTGATAGGC
TTGTTGATTATGCCATGAGGTTTCACTCCCCCAAGTGTTGTAACCATGGTAGATCCATCGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCATTAAGATCCCGATTGCGGATGTCGAGAGAGGAGATGAAGGAGATCTTTAGAGAGCACGACATCGACGGAGATGGCGTCCTTAGCATCAGTGAGCTCACCCA
CGCCTTCGGCTTCTTAGGCAATATTCTTCCATACTACAAAGCTCACTATGGTCTCGCTTATGCTGACTATGATTGTAATGGCTTTATCACTGAAGATGAGCTTGATAGGC
TTGTTGATTATGCCATGAGGTTTCACTCCCCCAAGTGTTGTAACCATGGTAGATCCATCGTGTAA
Protein sequenceShow/hide protein sequence
MAPLRSRLRMSREEMKEIFREHDIDGDGVLSISELTHAFGFLGNILPYYKAHYGLAYADYDCNGFITEDELDRLVDYAMRFHSPKCCNHGRSIV