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CmoCh12G004910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G004910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCalmodulin
Genome locationCmo_Chr12:3017740..3018018
RNA-Seq ExpressionCmoCh12G004910
SyntenyCmoCh12G004910
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.9e-43100Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC
        MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3583.7Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC
        MGNSKSKTYKRVLVP +EEQLA +FK+HD DGDGKLTKEELKQAF+YLGSRFSSFR +EALRAAD DGDG I+MAEM KLIQY K+RKYTLC
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC

KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3391.67Show/hide
Query:  NSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKN
        N   K  K +LVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKN
Subjt:  NSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKN

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-3482.61Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC
        MGN+KS  YKRVLVP TEEQLA IFKSHDRDGDGKL+KEELKQAFNYLGSRFSSFR  EALRAAD +GDG I+M EM+KLI+YTK RKYTLC
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3583.7Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC
        MGNSKSKTYKRVLVP +EEQLA +FK+HD DGDGKLTKEELKQAF+YLGSRFSSFR +EALRAAD DGDG I+MAEM KLIQY K+RKYTLC
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LP43 Uncharacterized protein3.6e-1654.76Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYT
        MG S    +K     LTE ++A +FK+HD+DGDG+LTKEELK AF YLG +F++FR  +AL AAD + D  I+  EMSKLI YT
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYT

A0A0A0LRB6 Uncharacterized protein4.6e-3276.92Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTL
        MGNSKSKTYKRVLVP +EEQLA +FK+HDRDGDG LTKEELKQAF YLGSRF +FR +EALRAAD +GDG I+M EM KLI+Y K RKYT+
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTL

A0A2N9FYQ0 Uncharacterized protein5.9e-1954.02Show/hide
Query:  KSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTL
        K  ++KR  +P TEEQL  IFKSHD DGDGKL+++E+K+AF YLGSR+ ++RA++A+  ADAD DG I   E+ KL+QY  +  YT+
Subjt:  KSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein9.3e-3378.02Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTL
        MGNSKSKTYKRVLVP +EEQLA +FK+HDRDGDG LTKEELKQAF YLGSRFS+FR +EALRAAD +GDG I+M EM KLI+Y K RKYT+
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTL

A0A7N2KRS3 Uncharacterized protein3.8e-1854.02Show/hide
Query:  KSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTL
        K+  +KR  VP  E+QL  IFKSHD DGDGKL+++ELK AF YLGSR+ ++R D+ALR ADA+ DG I   E+ KL++Y  +  YT+
Subjt:  KSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTL

SwissProt top hitse value%identityAlignment
A3E4F9 Calmodulin5.9e-0843.08Show/hide
Query:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI
        TEE+L   FK  DRDG+G ++  EL+     LG + +    DE +R AD DGDG IN  E  K++
Subjt:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI

A4UHC0 Calmodulin5.9e-0843.08Show/hide
Query:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI
        TEE+L   FK  DRDG+G ++  EL+     LG + +    DE +R AD DGDG IN  E  K++
Subjt:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI

A8I1Q0 Calmodulin5.9e-0843.08Show/hide
Query:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI
        TEE+L   FK  DRDG+G ++  EL+     LG + +    DE +R AD DGDG IN  E  K++
Subjt:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI

P24044 Calmodulin1.2e-0843.08Show/hide
Query:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI
        TEE+L   F+  DRDGDG ++ +EL+     LG + ++   DE +R AD DGDG IN  E  K++
Subjt:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI

P62203 Calmodulin1.2e-0843.08Show/hide
Query:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI
        TEE+L   F+  DRDGDG ++ +EL+     LG + ++   DE +R AD DGDG IN  E  K++
Subjt:  TEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI

Arabidopsis top hitse value%identityAlignment
AT1G32250.1 Calcium-binding EF-hand family protein1.7e-0740.3Show/hide
Query:  PLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI
        P TEEQL  +F+  D DG+G +T  EL  +   LG   +       ++ AD+DGDG IN  E +K I
Subjt:  PLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLI

AT4G04695.1 calcium-dependent protein kinase 311.7e-0736.71Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAG---IFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAE
        M   K    K +   L+EE++ G   +F + D D  G +T EELK     LGS  S    ++ + AAD DG+GTI++ E
Subjt:  MGNSKSKTYKRVLVPLTEEQLAG---IFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAE

AT4G23650.1 calcium-dependent protein kinase 62.3e-0737.97Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGI---FKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAE
        M   K    K +   L+EE++ G+   FKS D D +G +T EEL+     LGS+ S     + + AAD DGDG+I+  E
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGI---FKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAE

AT5G12180.1 calcium-dependent protein kinase 179.3e-0937.97Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGI---FKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAE
        M N K    + +   L+EE++ G+   FK  D D  G +T EEL+Q     G+R S +   + + AADADG+GTI+  E
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGI---FKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAE

AT5G19360.1 calcium-dependent protein kinase 349.3e-0937.97Show/hide
Query:  MGNSKSKTYKRVLVPLTEEQLAGI---FKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAE
        M N K    + +   L+EE++ G+   FK  D D  G +T EEL+Q     G+R S +   + + AADADG+GTI+  E
Subjt:  MGNSKSKTYKRVLVPLTEEQLAGI---FKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAATTCCAAAAGTAAAACTTACAAACGAGTATTGGTTCCATTAACCGAGGAGCAACTGGCTGGCATTTTTAAGAGCCACGACCGAGACGGAGATGGTAAGCTGAC
AAAGGAAGAGTTGAAGCAAGCCTTCAACTATCTCGGTTCACGCTTCAGCTCCTTCAGAGCCGATGAAGCTCTACGCGCTGCTGATGCTGACGGCGACGGTACCATCAACA
TGGCTGAAATGAGCAAGCTAATTCAATATACCAAAAACCGTAAATATACTCTCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAATTCCAAAAGTAAAACTTACAAACGAGTATTGGTTCCATTAACCGAGGAGCAACTGGCTGGCATTTTTAAGAGCCACGACCGAGACGGAGATGGTAAGCTGAC
AAAGGAAGAGTTGAAGCAAGCCTTCAACTATCTCGGTTCACGCTTCAGCTCCTTCAGAGCCGATGAAGCTCTACGCGCTGCTGATGCTGACGGCGACGGTACCATCAACA
TGGCTGAAATGAGCAAGCTAATTCAATATACCAAAAACCGTAAATATACTCTCTGTTGA
Protein sequenceShow/hide protein sequence
MGNSKSKTYKRVLVPLTEEQLAGIFKSHDRDGDGKLTKEELKQAFNYLGSRFSSFRADEALRAADADGDGTINMAEMSKLIQYTKNRKYTLC