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CmoCh12G005040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G005040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:3104152..3107741
RNA-Seq ExpressionCmoCh12G005040
SyntenyCmoCh12G005040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585677.1 putative E3 ubiquitin-protein ligase RHG1A, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2091.38Show/hide
Query:  ECNGRCRFNLPLYNDWTAGGFRHLRLKLRANALLTDKDSIGERKGLGCQLSVIIIAAV
        +C    RFNLPLYNDWTAGGFRHLRLKLRANALLTDKDSIGERKGLGCQLSVIIIAAV
Subjt:  ECNGRCRFNLPLYNDWTAGGFRHLRLKLRANALLTDKDSIGERKGLGCQLSVIIIAAV
KAG7020583.1 hypothetical protein SDJN02_17269, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3498.65Show/hide
Query:  REILKLKASYPSLPFHGLLLGFSSQILLHRSDPFPPPPPFQISNFHLFVWWLLSSFLAEVFNARAELADNMNTV
        REILKLKASYPSLPFHGLLLGFSSQILLHRSDPFPPPPPFQISNFHLFVWWLLSSFLAEVFNARAELADNMNT+
Subjt:  REILKLKASYPSLPFHGLLLGFSSQILLHRSDPFPPPPPFQISNFHLFVWWLLSSFLAEVFNARAELADNMNTV
KAG7020588.1 hypothetical protein SDJN02_17274, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-0863.01Show/hide
Query:  REILKLK----ASYPSLPFHGLLLGFSSQILLHRSDPFPPPPPFQISNFHLFVWWLLSSFLAEVFNARAELAD
        R  LKLK    AS+P+      LLGFSS+ LLHRSDPF    PF  SNFHL V  ++SSFLAEVFNARAELAD
Subjt:  REILKLK----ASYPSLPFHGLLLGFSSQILLHRSDPFPPPPPFQISNFHLFVWWLLSSFLAEVFNARAELAD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAGATATCAGTTTTCAATGAGACAGAATTTAGCGTTGTGTGTTTGGATACTACGTTGGAGTGTAACGGCAGATGCCGCTTTAATCTTCCTCTGTACAAT
GATTGGACTGCTGGTGGCTTCCGACATTTGAGGCTAAAGCTGCGTGCAAATGCTTTACTTACAGACAAGGACTCCATAGGAGAAAGAAAGGGATTGGGATGTCAG
CTTTCAGTGATTATTATTGCAGCAGTGAGGGAGATCCTCAAGCTTAAAGCTTCTTATCCCTCGCTTCCATTTCACGGATTGCTTCTTGGGTTTTCGTCCCAGATC
CTTCTTCATAGATCGGACCCTTTTCCTCCTCCTCCTCCTTTTCAAATTTCAAATTTCCATCTGTTTGTTTGGTGGTTGTTGTCTTCTTTTCTGGCGGAGGTTTTT
AATGCGAGAGCTGAATTAGCGGATAATATGAATACTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAGATATCAGTTTTCAATGAGACAGAATTTAGCGTTGTGTGTTTGGATACTACGTTGGAGTGTAACGGCAGATGCCGCTTTAATCTTCCTCTGTACAAT
GATTGGACTGCTGGTGGCTTCCGACATTTGAGGCTAAAGCTGCGTGCAAATGCTTTACTTACAGACAAGGACTCCATAGGAGAAAGAAAGGGATTGGGATGTCAG
CTTTCAGTGATTATTATTGCAGCAGTGAGGGAGATCCTCAAGCTTAAAGCTTCTTATCCCTCGCTTCCATTTCACGGATTGCTTCTTGGGTTTTCGTCCCAGATC
CTTCTTCATAGATCGGACCCTTTTCCTCCTCCTCCTCCTTTTCAAATTTCAAATTTCCATCTGTTTGTTTGGTGGTTGTTGTCTTCTTTTCTGGCGGAGGTTTTT
AATGCGAGAGCTGAATTAGCGGATAATATGAATACTGTTTAA
Protein sequenceShow/hide protein sequence
MQEISVFNETEFSVVCLDTTLECNGRCRFNLPLYNDWTAGGFRHLRLKLRANALLTDKDSIGERKGLGCQLSVIIIAAVREILKLKASYPSLPFHGLLLGFSSQI
LLHRSDPFPPPPPFQISNFHLFVWWLLSSFLAEVFNARAELADNMNTV