; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G005360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G005360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAB hydrolase-1 domain-containing protein
Genome locationCmo_Chr12:3269505..3269765
RNA-Seq ExpressionCmoCh12G005360
SyntenyCmoCh12G005360
Gene Ontology termsGO:0010223 - secondary shoot formation (biological process)
GO:1901601 - strigolactone biosynthetic process (biological process)
GO:1902348 - cellular response to strigolactone (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR029058 - Alpha/Beta hydrolase fold
IPR031143 - Strigolactone esterase D14 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585703.1 Transcription factor basic helix-loop-helix 54, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3797.67Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQN VEMLHT+SHLPHLSSPQLLVRKLRRALSR
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

XP_022962263.1 strigolactone esterase RMS3 [Cucurbita moschata]4.3e-3489.53Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCI+QTAQD SVPAS+AIYLRDHLGG+N VEML TE HLPHLS+PQLLVRKLRRAL+R
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

XP_022996864.1 strigolactone esterase RMS3 [Cucurbita maxima]1.9e-3490.7Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCI+QTAQD SVPAS+AIYLRDHLGG+N VEML TE HLPHLS+PQLLVRKLRRALSR
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

XP_023002700.1 strigolactone esterase RMS3-like [Cucurbita maxima]6.6e-3593.02Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGG+N  EML TE HLPHLS+PQLLVRKLRRALSR
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

XP_023546980.1 strigolactone esterase RMS3 [Cucurbita pepo subsp. pepo]4.3e-3489.53Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCI+QTAQD SVPAS+AIYLRDHLGG+N VEML TE HLPHLS+PQLLVRKLRRAL+R
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

TrEMBL top hitse value%identityAlignment
A0A0A0LNU2 Sigma factor sigb regulation protein rsbq4.6e-3488.37Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCI+QTAQD SVP S+AIYLRDHLGG+N +EML TE HLPHLS+PQLLVRKLRRALSR
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

A0A5A7V5G5 Strigolactone esterase D144.6e-3488.37Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCI+QTAQD SVP S+AIYLRDHLGG+N +EML TE HLPHLS+PQLLVRKLRRALSR
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

A0A6J1HEB7 strigolactone esterase RMS32.1e-3489.53Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCI+QTAQD SVPAS+AIYLRDHLGG+N VEML TE HLPHLS+PQLLVRKLRRAL+R
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

A0A6J1K9V8 strigolactone esterase RMS39.3e-3590.7Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCI+QTAQD SVPAS+AIYLRDHLGG+N VEML TE HLPHLS+PQLLVRKLRRALSR
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

A0A6J1KPP6 strigolactone esterase RMS3-like3.2e-3593.02Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGG+N  EML TE HLPHLS+PQLLVRKLRRALSR
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

SwissProt top hitse value%identityAlignment
A0A109QYD3 Strigolactone esterase RMS35.3e-2765.12Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVS+ +F+SDLRG+LGLV VPCCIMQTA+D SVPAS+A Y+++H+GG++ V+ L TE HLPHLS+P  L  +L  ALS+
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

J9U5U9 Probable strigolactone esterase DAD23.1e-2769.41Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALS
        MRPDI+LFVS+ +F+SD+RGVLGLVKVPC I QTA+D SVPAS+A YL++HLGG+N V  L+ E HLPHLS+P LL ++LRRALS
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALS

Q10J20 Probable esterase D14L4.2e-1650Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRR
        +RPDI+L V++ IF SD+R +L LV VPC I+Q+ +D +VP  ++ YL  HLGG +IVE++ +E HLP LSSP +++  L R
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRR

Q10QA5 Strigolactone esterase D144.9e-2562.79Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISL V + +F +DLRGVLG+V+ PC ++QT +D SVPAS+A YL+ HLGG+  VE L TE HLPHLS+P LL + LRRAL+R
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

Q9SQR3 Strigolactone esterase D144.5e-2668.6Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVS+ +F+SDLRGVLGLV+VP C++QTA+D SVPAS+A YLR HLGG   VE L TE HLP LS+P  L + LRRAL R
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

Arabidopsis top hitse value%identityAlignment
AT3G03990.1 alpha/beta-Hydrolases superfamily protein3.2e-2768.6Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR
        MRPDISLFVS+ +F+SDLRGVLGLV+VP C++QTA+D SVPAS+A YLR HLGG   VE L TE HLP LS+P  L + LRRAL R
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR

AT3G24420.1 alpha/beta-Hydrolases superfamily protein2.7e-1035.29Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTE-SHLPHLSSPQLLVRKLRRAL
        M+P+ +L ++K++F SD R +LG V VPC ++Q   D  VP S+A ++++ + G++ VE++     H P ++S   L+  +RR L
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTE-SHLPHLSSPQLLVRKLRRAL

AT4G37470.1 alpha/beta-Hydrolases superfamily protein1.8e-1443.9Show/hide
Query:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRR
        MRPDI+L V + IF SD+R +L  V VPC I+Q+ +D +VP  ++ YL  +LG +++VE++ ++ HLP LSSP  ++  + R
Subjt:  MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCCGACATTTCCCTGTTCGTGTCGAAGGTGATCTTCAGCAGCGATCTCCGGGGAGTTCTCGGGCTGGTGAAAGTCCCTTGTTGCATTATGCAAACCGCTCAAGA
CGCGTCGGTTCCGGCATCGATGGCTATCTACCTGAGAGACCATCTCGGCGGCCAAAACATCGTGGAGATGCTGCACACCGAAAGCCACCTACCCCATCTCAGTTCTCCTC
AGCTACTGGTCCGCAAGCTCCGCCGTGCCCTTTCCCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCCGACATTTCCCTGTTCGTGTCGAAGGTGATCTTCAGCAGCGATCTCCGGGGAGTTCTCGGGCTGGTGAAAGTCCCTTGTTGCATTATGCAAACCGCTCAAGA
CGCGTCGGTTCCGGCATCGATGGCTATCTACCTGAGAGACCATCTCGGCGGCCAAAACATCGTGGAGATGCTGCACACCGAAAGCCACCTACCCCATCTCAGTTCTCCTC
AGCTACTGGTCCGCAAGCTCCGCCGTGCCCTTTCCCGGTGA
Protein sequenceShow/hide protein sequence
MRPDISLFVSKVIFSSDLRGVLGLVKVPCCIMQTAQDASVPASMAIYLRDHLGGQNIVEMLHTESHLPHLSSPQLLVRKLRRALSR