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CmoCh12G005440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G005440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFKBP-type peptidyl-prolyl cis-trans isomerase family protein
Genome locationCmo_Chr12:3332812..3333258
RNA-Seq ExpressionCmoCh12G005440
SyntenyCmoCh12G005440
Gene Ontology termsNA
InterPro domainsIPR016972 - Uncharacterised conserved protein UCP031279


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020614.1 hypothetical protein SDJN02_17300, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-7699.32Show/hide
Query:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST
        MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST
Subjt:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST

Query:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG
        GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYA TSTKSG
Subjt:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG

XP_008444532.1 PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo]1.2e-6585.42Show/hide
Query:  KAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLP
        KA N++KFMRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRELVKAASVRS+DIKD+DAD++YPQR+RQS GLP
Subjt:  KAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLP

Query:  KSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG
        KSCSVGMGRIDED+ACEFE  VE+K DLVYPRS+SYAVT++KSG
Subjt:  KSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG

XP_022951262.1 uncharacterized protein LOC111454153 [Cucurbita moschata]7.0e-77100Show/hide
Query:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST
        MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST
Subjt:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST

Query:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
        GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
Subjt:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA

XP_023002833.1 uncharacterized protein LOC111496579 [Cucurbita maxima]1.7e-7598.65Show/hide
Query:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST
        MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQS 
Subjt:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST

Query:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
        GLPKSCSVGMGRIDEDSACEFE GVEEKGDLVYPRSRSYAVTSTKSGA
Subjt:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA

XP_038884662.1 uncharacterized protein LOC120075388 [Benincasa hispida]1.6e-6585.14Show/hide
Query:  MSTK-AHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQS
        M TK A N+SKF+RFVTLPIRALGKAKD YVRSIMDCAPRVSHGYPSGQ+PVLPKSYSSRSCRSNETDDFRELVKAASVRS+DIKD+DAD++YPQR++QS
Subjt:  MSTK-AHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQS

Query:  TGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG
         GLPKSCSVGMGRIDED+ACEFE GVE+K DLVYPRS+SYAVT++K G
Subjt:  TGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG

TrEMBL top hitse value%identityAlignment
A0A0A0LN74 Uncharacterized protein9.6e-6482.43Show/hide
Query:  MSTK-AHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQS
        M TK A N++KF+RFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRELVKAASVRS+DIKD+DAD++YPQR RQS
Subjt:  MSTK-AHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQS

Query:  TGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG
         GLPKSCSVGMGRIDED+ACEFE GVE+K  L YPRS+SYAVT++ SG
Subjt:  TGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG

A0A1S3BAI0 uncharacterized protein LOC1034878236.0e-6685.42Show/hide
Query:  KAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLP
        KA N++KFMRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRELVKAASVRS+DIKD+DAD++YPQR+RQS GLP
Subjt:  KAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLP

Query:  KSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG
        KSCSVGMGRIDED+ACEFE  VE+K DLVYPRS+SYAVT++KSG
Subjt:  KSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG

A0A5A7UYI9 Uncharacterized protein8.2e-6386.76Show/hide
Query:  MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMG
        MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRELVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMG
Subjt:  MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMG

Query:  RIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG
        RIDED+ACEFE  VE+K DLVYPRS+SYAVT++KSG
Subjt:  RIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSG

A0A6J1GH58 uncharacterized protein LOC1114541533.4e-77100Show/hide
Query:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST
        MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST
Subjt:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST

Query:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
        GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
Subjt:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA

A0A6J1KUQ7 uncharacterized protein LOC1114965798.4e-7698.65Show/hide
Query:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST
        MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQS 
Subjt:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQST

Query:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
        GLPKSCSVGMGRIDEDSACEFE GVEEKGDLVYPRSRSYAVTSTKSGA
Subjt:  GLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10140.1 Uncharacterised conserved protein UCP0312793.7e-2340.74Show/hide
Query:  NRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNET------------DDFRELVKAASVRSMDIKDVDADVVYPQ
        N+SKF+R ++ P+RALGKA+D YVRSI  CA R  +   +      P+S SS S   + +            +D+ ELV+AASVRS+  K+ + D++  +
Subjt:  NRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNET------------DDFRELVKAASVRSMDIKDVDADVVYPQ

Query:  RVRQST-----GLPKSCSVGMGRIDEDSACEFEGGVEEK-------GDLVYPRSRSYAVTST
        +++Q       GLPKS S GM RI+E+   E EG V  K        DL+YPRS+SYAVT++
Subjt:  RVRQST-----GLPKSCSVGMGRIDEDSACEFEGGVEEK-------GDLVYPRSRSYAVTST

AT1G58420.1 Uncharacterised conserved protein UCP0312793.5e-1838.42Show/hide
Query:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRV--SHGYPSGQMPVLPKSYSSRSCRSNET------------DDFRELVKAASVRSMDIKDV
        M  +   +++F+R VT+P++ L KA+DLY+RSI  CA R   S    +  +P  P+S S+ S  S+              DD+ EL++AASVRS+  K+ 
Subjt:  MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRV--SHGYPSGQMPVLPKSYSSRSCRSNET------------DDFRELVKAASVRSMDIKDV

Query:  DADVVYPQRVRQST----------------GLPKSCSVG--MGRIDEDSACEFEGGV--EEKG-DLVYPRSRSYAVT
        + D++  Q+ +Q                  GLPKS SVG  M RIDE+   E EG V  ++KG D +YPRSRS+AVT
Subjt:  DADVVYPQRVRQST----------------GLPKSCSVG--MGRIDEDSACEFEGGV--EEKG-DLVYPRSRSYAVT

AT4G37700.1 unknown protein2.4e-0629.17Show/hide
Query:  SKFMRFVTLPIRALGKAKDLYVRSIMDCAPR------VSHGYPSGQMPVLPKSYSSRSCRSN---ETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQS
        +K  +++ +PI+ L KA+D+Y+RS+   +        +S G P   +  LP+S+S+   + +   E D   +LV+AAS R+  I   D     P ++R++
Subjt:  SKFMRFVTLPIRALGKAKDLYVRSIMDCAPR------VSHGYPSGQMPVLPKSYSSRSCRSN---ETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQS

Query:  TGLPKSCS--VGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAV
            +SC    G  +IDE S     G   +    ++ RS+SY+V
Subjt:  TGLPKSCS--VGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCACCAAAGCGCACAATCGGAGCAAATTTATGCGATTCGTTACTCTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGC
TCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAGAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGGGAGCTTGTTA
AGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACGGGGCTGCCTAAGAGTTGCAGCGTTGGAATG
GGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGGGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGG
GGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCACCAAAGCGCACAATCGGAGCAAATTTATGCGATTCGTTACTCTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGC
TCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAGAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGGGAGCTTGTTA
AGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACGGGGCTGCCTAAGAGTTGCAGCGTTGGAATG
GGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGGGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGG
GGCTTGA
Protein sequenceShow/hide protein sequence
MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGM
GRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA