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CmoCh12G005460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G005460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCW7
Genome locationCmo_Chr12:3345319..3347785
RNA-Seq ExpressionCmoCh12G005460
SyntenyCmoCh12G005460
Gene Ontology termsNA
InterPro domainsIPR019141 - Protein of unknown function DUF2045


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020616.1 hypothetical protein SDJN02_17302 [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2557.8Show/hide
Query:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLLEFVSYTEAFVCLCRIPRS
        MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMAS   L+  F+ +      Y   + ++  LLE +    AF+ +  I   
Subjt:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLLEFVSYTEAFVCLCRIPRS

Query:  STVANFIVL
              +V+
Subjt:  STVANFIVL

XP_022962498.1 uncharacterized protein KIAA0930 homolog isoform X1 [Cucurbita moschata]4.5e-1560.76Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYDGSMYLVNKLL
        VLTETD CYCVLLNAH G AFPGKD  ENCNS ++MAS T            TL+SGFVSYQMV DAYD        LL
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYDGSMYLVNKLL

XP_022962499.1 uncharacterized protein KIAA0930 homolog isoform X2 [Cucurbita moschata]4.5e-1560.76Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYDGSMYLVNKLL
        VLTETD CYCVLLNAH G AFPGKD  ENCNS ++MAS T            TL+SGFVSYQMV DAYD        LL
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYDGSMYLVNKLL

XP_023536763.1 uncharacterized protein LOC111798043 isoform X1 [Cucurbita pepo subsp. pepo]9.9e-3175.56Show/hide
Query:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMA-------------SITTLYSGFVSYQMVCDAYDGSMYL
        MLGDGG TPCRVI+QVLTETDDCYCVLLNAHDG+AFPGKDYEENCNS +VMA              ITTLYSGFVSYQMVCDAYDG  +L
Subjt:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMA-------------SITTLYSGFVSYQMVCDAYDGSMYL

XP_023536764.1 uncharacterized protein LOC111798043 isoform X2 [Cucurbita pepo subsp. pepo]1.7e-3075.28Show/hide
Query:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMA-------------SITTLYSGFVSYQMVCDAYDGSMY
        MLGDGG TPCRVI+QVLTETDDCYCVLLNAHDG+AFPGKDYEENCNS +VMA              ITTLYSGFVSYQMVCDAYDG  +
Subjt:  MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMA-------------SITTLYSGFVSYQMVCDAYDGSMY

TrEMBL top hitse value%identityAlignment
A0A6J1BRE7 uncharacterized protein KIAA0930 homolog isoform X21.4e-1458.75Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVM-------------ASITTLYSGFVSYQMVCDAYDGSMYLVNKLL
        VLTETD CYCVLLNAHDG AFPGKD  ENCNS DV              +   TL+SGFVSYQMV DAYD        LL
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVM-------------ASITTLYSGFVSYQMVCDAYDGSMYLVNKLL

A0A6J1HEZ0 uncharacterized protein KIAA0930 homolog isoform X12.2e-1560.76Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYDGSMYLVNKLL
        VLTETD CYCVLLNAH G AFPGKD  ENCNS ++MAS T            TL+SGFVSYQMV DAYD        LL
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYDGSMYLVNKLL

A0A6J1HH94 uncharacterized protein KIAA0930 homolog isoform X22.2e-1560.76Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYDGSMYLVNKLL
        VLTETD CYCVLLNAH G AFPGKD  ENCNS ++MAS T            TL+SGFVSYQMV DAYD        LL
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYDGSMYLVNKLL

A0A6J1K7W4 uncharacterized protein LOC111492479 isoform X28.2e-1565.22Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYD
        VLTETD CYCVLLNAH G AFPGKD  ENCNS +++AS T            TL+SGFVSYQMV DAYD
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYD

A0A6J1KA48 uncharacterized protein KIAA0930 homolog isoform X18.2e-1565.22Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYD
        VLTETD CYCVLLNAH G AFPGKD  ENCNS +++AS T            TL+SGFVSYQMV DAYD
Subjt:  VLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASIT------------TLYSGFVSYQMVCDAYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G59520.1 CW74.9e-1249.32Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLL
        VLT+ D CYCVLLN+HDG AFP        D   N +   V     TL+SGFVSYQMV +AY+G       LL
Subjt:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLL

AT1G59520.2 CW74.9e-1249.32Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLL
        VLT+ D CYCVLLN+HDG AFP        D   N +   V     TL+SGFVSYQMV +AY+G       LL
Subjt:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLL

AT1G59520.3 CW74.9e-1249.32Show/hide
Query:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLL
        VLT+ D CYCVLLN+HDG AFP        D   N +   V     TL+SGFVSYQMV +AY+G       LL
Subjt:  VLTETDDCYCVLLNAHDGVAFP------GKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGAGATGGAGGAGAAACTCCTTGCAGGGTTATTATTCAGGTCTTGACAGAGACTGACGATTGCTATTGCGTACTTCTCAATGCACATGATGGTGTAGCTTTTCC
TGGAAAGGATTATGAAGAAAATTGCAATTCTGGTGATGTTATGGCCTCGATTACTACTCTATACTCTGGATTTGTCAGCTACCAAATGGTTTGTGATGCATACGACGGAT
CAATGTACTTAGTTAACAAGCTTTTAGAGTTTGTAAGCTACACGGAGGCTTTTGTTTGCCTTTGCCGTATTCCTCGAAGTTCCACGGTAGCTAACTTTATTGTTCTGGCT
TGGTCCTCTTAA
mRNA sequenceShow/hide mRNA sequence
TCCTTTCTGTTCTACTGCATAGTTTCTCTCAGAACTGGGAGCGTATTCAAACATGTTGTTTCTGCGTTCTTTTTCATTTTTAGAAATTTGAAGCTTCCGGGAGATATGCT
CGGAGATGGAGGAGAAACTCCTTGCAGGGTTATTATTCAGGTCTTGACAGAGACTGACGATTGCTATTGCGTACTTCTCAATGCACATGATGGTGTAGCTTTTCCTGGAA
AGGATTATGAAGAAAATTGCAATTCTGGTGATGTTATGGCCTCGATTACTACTCTATACTCTGGATTTGTCAGCTACCAAATGGTTTGTGATGCATACGACGGATCAATG
TACTTAGTTAACAAGCTTTTAGAGTTTGTAAGCTACACGGAGGCTTTTGTTTGCCTTTGCCGTATTCCTCGAAGTTCCACGGTAGCTAACTTTATTGTTCTGGCTTGGTC
CTCTTAA
Protein sequenceShow/hide protein sequence
MLGDGGETPCRVIIQVLTETDDCYCVLLNAHDGVAFPGKDYEENCNSGDVMASITTLYSGFVSYQMVCDAYDGSMYLVNKLLEFVSYTEAFVCLCRIPRSSTVANFIVLA
WSS