; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G005590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G005590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionhomeobox protein knotted-1-like 2
Genome locationCmo_Chr12:3457585..3461644
RNA-Seq ExpressionCmoCh12G005590
SyntenyCmoCh12G005590
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045165 - cell fate commitment (biological process)
GO:0048856 - anatomical structure development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001356 - Homeobox domain
IPR005539 - ELK domain
IPR005540 - KNOX1
IPR005541 - KNOX2
IPR008422 - Homeobox KN domain
IPR009057 - Homeobox-like domain superfamily
IPR017970 - Homeobox, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585727.1 hypothetical protein SDJN03_18460, partial [Cucurbita argyrosperma subsp. sororia]1.4e-16195.11Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKD D+MKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTLY----------AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
        EGYY MLVKYREELTKPIQEA+DFMERVESQLNTL           AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
Subjt:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTLY----------AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL

Query:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
        KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
Subjt:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD

Query:  AHYRLGP
        AHYRLGP
Subjt:  AHYRLGP

XP_022951002.1 homeobox protein knotted-1-like 2 [Cucurbita moschata]2.6e-16396.42Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTLY----------AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
        EGYYRMLVKYREELTKPIQEASDFMERVESQLNTL           AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
Subjt:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTLY----------AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL

Query:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
        KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
Subjt:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD

Query:  AHYRLGP
        AHYRLGP
Subjt:  AHYRLGP

XP_023002603.1 homeotic protein knotted-1-like isoform X2 [Cucurbita maxima]3.1e-14890.55Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHY HHQ+Q QQVHDFQISSGGSKD D+MKAKIISHSQFSNLLQAFLDCKKVGAP EVAAELGSVGEEFEERRRCSMAASGG SDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTL---------YAATENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
        EGYYRMLVKYREELTKPIQEA+DFM R+ESQLNTL          A  ENRDGMGSSEEEQEK GGE  RDATEQIDPRADERELKNHLLKKYSGYLSTL
Subjt:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTL---------YAATENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL

Query:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
        KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNT   AAAFYFDG YMGD
Subjt:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD

Query:  AHYRLGP
        AHYRLGP
Subjt:  AHYRLGP

XP_023536897.1 homeobox protein knotted-1-like 2 isoform X1 [Cucurbita pepo subsp. pepo]2.3e-15994.16Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGG-SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF
        MEDQYNPNFHYHHHQ+Q QQVHDFQISSGG SKDID+MKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGG-SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF

Query:  MEGYYRMLVKYREELTKPIQEASDFMERVESQLNTLY----------AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLST
        MEGYYRMLVKYREELTKPIQEA+DFMERVESQLNTL           AATENRDGMGSSEEE EKGG+GGRDATEQIDPRADERELKNHLLKKYSGYLST
Subjt:  MEGYYRMLVKYREELTKPIQEASDFMERVESQLNTLY----------AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLST

Query:  LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG
        LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG
Subjt:  LKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMG

Query:  DAHYRLGP
        DAHYRLGP
Subjt:  DAHYRLGP

XP_023536898.1 homeobox protein knotted-1-like 2 isoform X2 [Cucurbita pepo subsp. pepo]3.0e-15994.44Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGG-SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF
        MEDQYNPNFHYHHHQ+Q QQVHDFQISSGG SKDID+MKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGG-SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQF

Query:  MEGYYRMLVKYREELTKPIQEASDFMERVESQLNT--------LYAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLK
        MEGYYRMLVKYREELTKPIQEA+DFMERVESQLNT        L +ATENRDGMGSSEEE EKGG+GGRDATEQIDPRADERELKNHLLKKYSGYLSTLK
Subjt:  MEGYYRMLVKYREELTKPIQEASDFMERVESQLNT--------LYAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLK

Query:  QELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDA
        QELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDA
Subjt:  QELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDA

Query:  HYRLGP
        HYRLGP
Subjt:  HYRLGP

TrEMBL top hitse value%identityAlignment
A0A6J1GGF7 homeobox protein knotted-1-like 21.3e-16396.42Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTLY----------AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
        EGYYRMLVKYREELTKPIQEASDFMERVESQLNTL           AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
Subjt:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTLY----------AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL

Query:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
        KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
Subjt:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD

Query:  AHYRLGP
        AHYRLGP
Subjt:  AHYRLGP

A0A6J1HDA6 homeotic protein knotted-1-like isoform X13.2e-11975.99Show/hide
Query:  HYHHHQEQQQQVH---DFQISSGG--SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYY
        H+HHHQ      H   +FQISSGG  S D+  MKAKIISHS FSNLLQAFLDC+KVGAP EVAA+L SV EEFE+RRR SMA++GG +DPELD FME YY
Subjt:  HYHHHQEQQQQVH---DFQISSGG--SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYY

Query:  RMLVKYREELTKPIQEASDFMERVESQLNTL---------YAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELS
         MLVKYREELT+PI+EA+DFM R+E QLNTL          AATE +   G SEEEQEK  E  R+  +Q+DPRA+ERELKNHLLKKYSGYLS+LKQELS
Subjt:  RMLVKYREELTKPIQEASDFMERVESQLNTL---------YAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELS

Query:  KKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN--TAAAAAAFYFDGHYMGDAHY
        KKKKKGKLPKDARQELLRWWE+H+KWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQ MGMEGFYHPN   AAAAAAFYFDGH+MGD+HY
Subjt:  KKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN--TAAAAAAFYFDGHYMGDAHY

Query:  RLGP
        RLGP
Subjt:  RLGP

A0A6J1K3G1 homeotic protein knotted-1-like isoform X13.2e-11975.66Show/hide
Query:  HYHHHQEQQQQVH---DFQISSGG--SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYY
        H+HHHQ      H   +FQIS GG  S D+D MKAKIISHS FSNLLQAFLDC+KVGAP EVAA+L SVGEEFE+RRR S A++GG +DPELD FME YY
Subjt:  HYHHHQEQQQQVH---DFQISSGG--SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYY

Query:  RMLVKYREELTKPIQEASDFMERVESQLNTL---------YAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELS
         MLVKYREELT+PI+EA+DFM R+E QLNTL          AATE +   G SEEEQEK  E  R+  +Q+DPRA+ERELKNHLLKKYSGYLS+LKQELS
Subjt:  RMLVKYREELTKPIQEASDFMERVESQLNTL---------YAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELS

Query:  KKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN--TAAAAAAFYFDGHYMGDAHY
        KKKKKGKLPKDARQELLRWWE+H+KWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSED Q MGMEGFYHPN   AAAAAAFYFDGH+MGD+HY
Subjt:  KKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN--TAAAAAAFYFDGHYMGDAHY

Query:  RLGP
        RLGP
Subjt:  RLGP

A0A6J1KJZ1 homeotic protein knotted-1-like isoform X12.5e-14889.97Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHY HHQ+Q QQVHDFQISSGGSKD D+MKAKIISHSQFSNLLQAFLDCKKVGAP EVAAELGSVGEEFEERRRCSMAASGG SDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTL-----------YAATENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLS
        EGYYRMLVKYREELTKPIQEA+DFM R+ESQLNTL            A  ENRDGMGSSEEEQEK GGE  RDATEQIDPRADERELKNHLLKKYSGYLS
Subjt:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTL-----------YAATENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLS

Query:  TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYM
        TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNT   AAAFYFDG YM
Subjt:  TLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYM

Query:  GDAHYRLGP
        GDAHYRLGP
Subjt:  GDAHYRLGP

A0A6J1KU25 homeotic protein knotted-1-like isoform X21.5e-14890.55Show/hide
Query:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM
        MEDQYNPNFHY HHQ+Q QQVHDFQISSGGSKD D+MKAKIISHSQFSNLLQAFLDCKKVGAP EVAAELGSVGEEFEERRRCSMAASGG SDPELDQFM
Subjt:  MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFM

Query:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTL---------YAATENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL
        EGYYRMLVKYREELTKPIQEA+DFM R+ESQLNTL          A  ENRDGMGSSEEEQEK GGE  RDATEQIDPRADERELKNHLLKKYSGYLSTL
Subjt:  EGYYRMLVKYREELTKPIQEASDFMERVESQLNTL---------YAATENRDGMGSSEEEQEK-GGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTL

Query:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD
        KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNT   AAAFYFDG YMGD
Subjt:  KQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGD

Query:  AHYRLGP
        AHYRLGP
Subjt:  AHYRLGP

SwissProt top hitse value%identityAlignment
O04134 Homeobox protein knotted-1-like 11.2e-9458.81Show/hide
Query:  QYNPNFHYHH----HQEQQQQVHDFQIS--------SGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGC
        QYN N + HH     +  Q  VH  Q +        S  S +++ +KAKII+H Q+SNL++A++DC++VGAP++V   L    +EFE R+R S  +    
Subjt:  QYNPNFHYHH----HQEQQQQVHDFQIS--------SGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGC

Query:  SDPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQLNTL-----------YAATENR-DGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHL
         DPELDQFME YY MLVKYREELT+PIQEA DFM R+E+QLN L           ++ +E++ +G+GSSE+EQE    GG     +IDPRA++RELKNHL
Subjt:  SDPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQLNTL-----------YAATENR-DGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHL

Query:  LKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAA
        L+KYSGYLS+LKQELSKKKKKGKLPK+ARQ+LL WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G +  N     A
Subjt:  LKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAA

Query:  AFYFDGHYMGDAHYRLGP
        A Y DGHY GD HYRLGP
Subjt:  AFYFDGHYMGDAHYRLGP

O04135 Homeobox protein knotted-1-like 21.4e-9559.62Show/hide
Query:  QYNPNFHYH---HHQEQQQQVHDFQIS--------SGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCS
        QYN N + H     +  Q  +H  Q +        S  S +++ +KAKII+H Q+SNLL+A++DC++VGAP++V A L    +EFE R+R S  +     
Subjt:  QYNPNFHYH---HHQEQQQQVHDFQIS--------SGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCS

Query:  DPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQLNTL-----------YAATENR-DGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLL
        DPELDQFME YY MLVKYREELT+PIQEA DFM R+E+QLN L           ++ +E++ +G+GSSEEEQE    GG     +IDPRA++RELKNHLL
Subjt:  DPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQLNTL-----------YAATENR-DGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLL

Query:  KKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAA
        +KYSGYLS+LKQELSKKKKKGKLPKDARQ+LL WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G +  N     AA
Subjt:  KKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAA

Query:  FYFDGHYMGDAHYRLGP
         Y DGHY+GD HYRLGP
Subjt:  FYFDGHYMGDAHYRLGP

P46609 Homeobox protein knotted-1-like 61.7e-8862.04Show/hide
Query:  SSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKYREELTKPIQEASDFME
        S+  + D++ +KAKIISH  +S+LL A+LDC+KVGAP EVAA L +V ++ E R+R ++   G  ++PELDQFME Y+ MLVKYREELT+P+QEA +F+ 
Subjt:  SSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKYREELTKPIQEASDFME

Query:  RVESQLNTLY---AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPY
        RVE+QLNTL     +  N    GSSEE+QE  G GG     +ID    ++ELK+HLLKKYSGYLS+LKQELSKKKKKGKLPKDARQ+LL WWE+H KWPY
Subjt:  RVESQLNTLY---AATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPY

Query:  PSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAH-YRLG
        PSE++K+ALAESTGLD KQINNWFINQRKRHWKPS+++Q + M+G YHP     AAAFY DGH++ D   YRLG
Subjt:  PSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAH-YRLG

P46639 Homeobox protein knotted-1-like 15.6e-9260.2Show/hide
Query:  HHHQEQQQQVHDFQISSGGS----KDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEER-RRCSMAASGGCSDPELDQFMEGYYRM
        +H+    + +H+ Q ++  +     D++ MKAKII+H  +S LLQA+LDC+K+GAP +V   + +  ++FE R +R + + S    DPELDQFME Y  M
Subjt:  HHHQEQQQQVHDFQISSGGS----KDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEER-RRCSMAASGGCSDPELDQFMEGYYRM

Query:  LVKYREELTKPIQEASDFMERVESQLNTLYAA----TENRDG----MGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKK
        LVKYREELT+PIQEA +F+ R+ESQL+ L  +      N DG    MGSS+EEQE    GG     +IDPRA++RELKNHLLKKYSGYLS+LKQELSKKK
Subjt:  LVKYREELTKPIQEASDFMERVESQLNTLYAA----TENRDG----MGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKK

Query:  KKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLGP
        KKGKLPK+ARQ+LL WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G  HP+     AA Y DGHYMGD  YRLGP
Subjt:  KKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLGP

Q41330 Homeotic protein knotted-15.9e-9460Show/hide
Query:  YNPNFHY------HHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQ
        +N  FHY      HHH   +         +G  + I+ +KAKII+H Q SNLL A++DC+KVGAP EVAA L +V +EFE R+R S+       DPELDQ
Subjt:  YNPNFHY------HHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQ

Query:  FMEGYYRMLVKYREELTKPIQEASDFMERVESQLNTL-------YAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLK
        FME YY MLVKYREELT+P+QEA +FM+++E+QLN L       + + +  +G+GSSEE+Q+    GG     +IDPRA++RELKNHLL+KYSGYLS+LK
Subjt:  FMEGYYRMLVKYREELTKPIQEASDFMERVESQLNTL-------YAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLK

Query:  QELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDA
        QELSKKKKKGKLPKDARQ+L+ WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G  HP    +AAA Y +GHYMG+ 
Subjt:  QELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDA

Query:  HYRLG
         +RLG
Subjt:  HYRLG

Arabidopsis top hitse value%identityAlignment
AT1G23380.1 KNOTTED1-like homeobox gene 67.5e-6049.37Show/hide
Query:  IDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQLN
        + V+KAKI  H  +  LLQA++DC+KVGAP E+A  L  +  E +  ++  + +S   +DPELD+FME Y  +LVKY+ +L +P  EA+ F+ ++E QL 
Subjt:  IDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQLN

Query:  TLYAATE-----NRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAE
         L    E     + DG+ SS+EE      G  +  E    R ++R+LK+ LL+K+   +STLK E SKKKKKGKLP++ARQ LL WW +H KWPYP+E +
Subjt:  TLYAATE-----NRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAE

Query:  KLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGME
        K+ALA++TGLDQKQINNWFINQRKRHWKPSE++    M+
Subjt:  KLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGME

AT1G23380.2 KNOTTED1-like homeobox gene 62.4e-5848.96Show/hide
Query:  IDVMKAKIISHSQFSNLLQAFLDC--KKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQ
        + V+KAKI  H  +  LLQA++DC  K+VGAP E+A  L  +  E +  ++  + +S   +DPELD+FME Y  +LVKY+ +L +P  EA+ F+ ++E Q
Subjt:  IDVMKAKIISHSQFSNLLQAFLDC--KKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQ

Query:  LNTLYAATE-----NRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSE
        L  L    E     + DG+ SS+EE      G  +  E    R ++R+LK+ LL+K+   +STLK E SKKKKKGKLP++ARQ LL WW +H KWPYP+E
Subjt:  LNTLYAATE-----NRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSE

Query:  AEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGME
         +K+ALA++TGLDQKQINNWFINQRKRHWKPSE++    M+
Subjt:  AEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGME

AT1G62360.1 KNOX/ELK homeobox transcription factor4.1e-6652.36Show/hide
Query:  QVHDFQISSGG------SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASG--GC--SDPELDQFMEGYYRMLVK
        ++H  +I +GG      S     +KAKI++H  +  LL A+++C+KVGAP EV A L    EE       + A+ G  GC   DP LDQFME Y  MLVK
Subjt:  QVHDFQISSGG------SKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASG--GC--SDPELDQFMEGYYRMLVK

Query:  YREELTKPIQEASDFMERVESQLNTL----------YAATE-NRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKK
        Y +EL+KP +EA  F++RVE Q  +L          Y  T  +R+  GSSEEE +          E +DP+A++RELK  LL+KYSGYL +LKQE  KK+
Subjt:  YREELTKPIQEASDFMERVESQLNTL----------YAATE-NRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKK

Query:  KKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN
        KKGKLPK+ARQ+LL WW  H KWPYPSE +KLALAESTGLDQKQINNWFINQRKRHWKPSED+Q + M+   HP+
Subjt:  KKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPN

AT1G70510.1 KNOTTED-like from Arabidopsis thaliana 26.4e-5950.21Show/hide
Query:  IDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQLN
        + V+K+KI SH  +  LLQ ++DC+KVGAP E+A  L  +  E    +R     S   +DPELD+FME Y  +LVKY+ +L +P  EA+ F+ ++E QL 
Subjt:  IDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKYREELTKPIQEASDFMERVESQLN

Query:  TL-----YAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAE
         L      A   + DG  SS+EE  +  +   D ++Q   R+++R+LK+ LL+K+  ++S+LK E SKKKKKGKLP++ARQ LL WW VH+KWPYP+E +
Subjt:  TL-----YAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSKWPYPSEAE

Query:  KLALAESTGLDQKQINNWFINQRKRHWKPSEDV
        K++LAE TGLDQKQINNWFINQRKRHWKPSE++
Subjt:  KLALAESTGLDQKQINNWFINQRKRHWKPSEDV

AT4G08150.1 KNOTTED-like from Arabidopsis thaliana3.9e-9360.2Show/hide
Query:  HHHQEQQQQVHDFQISSGGS----KDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEER-RRCSMAASGGCSDPELDQFMEGYYRM
        +H+    + +H+ Q ++  +     D++ MKAKII+H  +S LLQA+LDC+K+GAP +V   + +  ++FE R +R + + S    DPELDQFME Y  M
Subjt:  HHHQEQQQQVHDFQISSGGS----KDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEER-RRCSMAASGGCSDPELDQFMEGYYRM

Query:  LVKYREELTKPIQEASDFMERVESQLNTLYAA----TENRDG----MGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKK
        LVKYREELT+PIQEA +F+ R+ESQL+ L  +      N DG    MGSS+EEQE    GG     +IDPRA++RELKNHLLKKYSGYLS+LKQELSKKK
Subjt:  LVKYREELTKPIQEASDFMERVESQLNTLYAA----TENRDG----MGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKK

Query:  KKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLGP
        KKGKLPK+ARQ+LL WWE+H KWPYPSE+EK+ALAESTGLDQKQINNWFINQRKRHWKPSED+Q M M+G  HP+     AA Y DGHYMGD  YRLGP
Subjt:  KKGKLPKDARQELLRWWEVHSKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCAGTACAACCCTAATTTTCATTATCATCATCATCAAGAACAGCAACAACAAGTTCATGATTTTCAAATAAGTAGCGGTGGGAGTAAGGATATTGATGTTAT
GAAGGCCAAAATCATCTCCCACTCTCAATTCTCTAATCTCCTCCAAGCTTTCTTGGATTGCAAAAAGGTGGGAGCTCCGGCGGAGGTGGCGGCGGAACTTGGGTCGGTAG
GGGAGGAGTTTGAGGAGCGGCGGCGGTGTTCAATGGCGGCGAGTGGGGGTTGTAGTGATCCAGAACTTGATCAGTTCATGGAAGGTTACTATAGGATGTTGGTGAAGTAT
AGAGAGGAGCTGACGAAGCCTATTCAAGAAGCTTCTGATTTCATGGAGAGAGTTGAATCTCAGCTCAATACTCTCTATGCAGCGACAGAAAATCGCGACGGAATGGGATC
ATCGGAGGAGGAGCAAGAGAAGGGCGGGGAAGGCGGAAGAGATGCAACGGAACAGATCGACCCACGAGCAGACGAGCGAGAGCTAAAGAATCACTTACTAAAGAAGTACA
GTGGGTATCTGAGCACTCTAAAGCAAGAGCTTTCAAAGAAGAAGAAGAAAGGAAAGCTCCCAAAAGACGCAAGGCAGGAGCTGCTGAGATGGTGGGAAGTGCACAGCAAA
TGGCCATACCCATCGGAGGCAGAGAAGTTGGCGCTAGCGGAATCAACTGGGTTGGATCAGAAACAGATAAATAATTGGTTCATAAACCAGAGGAAAAGGCATTGGAAGCC
GTCTGAGGATGTACAGTTGATGGGTATGGAGGGGTTTTACCATCCCAACACTGCTGCTGCTGCTGCTGCTTTTTACTTCGATGGGCATTACATGGGCGATGCCCATTACC
GTTTGGGTCCATGA
mRNA sequenceShow/hide mRNA sequence
CTGTTTAATTATTCCCCCACTTTAGGGTTTTGTAATAATTCCATTTTCCTTTCTCTCTCTTCTGTTACTCAGTTATTTTTGTTCTTTTAATGGAAGATCAGTACAACCCT
AATTTTCATTATCATCATCATCAAGAACAGCAACAACAAGTTCATGATTTTCAAATAAGTAGCGGTGGGAGTAAGGATATTGATGTTATGAAGGCCAAAATCATCTCCCA
CTCTCAATTCTCTAATCTCCTCCAAGCTTTCTTGGATTGCAAAAAGGTGGGAGCTCCGGCGGAGGTGGCGGCGGAACTTGGGTCGGTAGGGGAGGAGTTTGAGGAGCGGC
GGCGGTGTTCAATGGCGGCGAGTGGGGGTTGTAGTGATCCAGAACTTGATCAGTTCATGGAAGGTTACTATAGGATGTTGGTGAAGTATAGAGAGGAGCTGACGAAGCCT
ATTCAAGAAGCTTCTGATTTCATGGAGAGAGTTGAATCTCAGCTCAATACTCTCTATGCAGCGACAGAAAATCGCGACGGAATGGGATCATCGGAGGAGGAGCAAGAGAA
GGGCGGGGAAGGCGGAAGAGATGCAACGGAACAGATCGACCCACGAGCAGACGAGCGAGAGCTAAAGAATCACTTACTAAAGAAGTACAGTGGGTATCTGAGCACTCTAA
AGCAAGAGCTTTCAAAGAAGAAGAAGAAAGGAAAGCTCCCAAAAGACGCAAGGCAGGAGCTGCTGAGATGGTGGGAAGTGCACAGCAAATGGCCATACCCATCGGAGGCA
GAGAAGTTGGCGCTAGCGGAATCAACTGGGTTGGATCAGAAACAGATAAATAATTGGTTCATAAACCAGAGGAAAAGGCATTGGAAGCCGTCTGAGGATGTACAGTTGAT
GGGTATGGAGGGGTTTTACCATCCCAACACTGCTGCTGCTGCTGCTGCTTTTTACTTCGATGGGCATTACATGGGCGATGCCCATTACCGTTTGGGTCCATGACAGGAAT
TCAGCTCGCATTGCTTCGAAGTCAGAGCTTGGTTTTAGCTGCTTATCCTATATGGTATGCTAACTCTTTTTTAGTCCCTAGTGATTATAAAACAGGAAAAAAAAAAAGGA
AAGGGGTAATAGTTGATGATAGGGTATTTATTTTATTGTGTTTACTCATAATATTCTGCCTCTCATATGGTGAATATTCCTAAATGCATGTCAAGTAATAATATCCACCC
TTAGTCTTACCATTTCGTATTCTGATTCACATTGGTTTTTTCTTATTCTTTGAGTTTTAAATGTTTTGTTCACTTTGTCTGTTCGTTCCCCTTTGGTTTATGAATATTAT
GAAAAGGGTTATTTTAGTTTTTTATACAAAATTTGAAAGTATATGGGGTTGAGGGTTACTCGGAGGGAGACCCAGTTGGCTAATTAAGCGGAAGATCATAGTTTATAAGT
AAGCAATACTATCTCTATTTGCATGCGGCCTTTTGGGTAAAAAAAACAAAGTCATGAGAGCTTATGCTCAAAGGGGACAGTATCATACCATTATGGACGATCGTGGTTCC
TTACATGGCATCAGAGTCATGTCGTTAATGTAGTCATGTCAATGTAATCCTCACATGTCAAATAAAGAAGTTGTGAGCCTCGAAGGTGTAGTAAGAAATTACTCAAGAGT
TGAACAAAGGGTGTACTGTGTTCCAGGGCTCCATAGACCTCGGGG
Protein sequenceShow/hide protein sequence
MEDQYNPNFHYHHHQEQQQQVHDFQISSGGSKDIDVMKAKIISHSQFSNLLQAFLDCKKVGAPAEVAAELGSVGEEFEERRRCSMAASGGCSDPELDQFMEGYYRMLVKY
REELTKPIQEASDFMERVESQLNTLYAATENRDGMGSSEEEQEKGGEGGRDATEQIDPRADERELKNHLLKKYSGYLSTLKQELSKKKKKGKLPKDARQELLRWWEVHSK
WPYPSEAEKLALAESTGLDQKQINNWFINQRKRHWKPSEDVQLMGMEGFYHPNTAAAAAAFYFDGHYMGDAHYRLGP