; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G005840 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G005840
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:3597701..3601659
RNA-Seq ExpressionCmoCh12G005840
SyntenyCmoCh12G005840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020659.1 hypothetical protein SDJN02_17345, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-9993.1Show/hide
Query:  MVAVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSS
        MVAVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSS
Subjt:  MVAVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSS

Query:  VLTNLTGISKSTSSTTMSSDDVAVDVSLTITHLENSLDGDQSPGRCYSPSRQEAGVLETAFLLQPHIQISSGTEYKNQLGIFNCVDGHSALLVDKLSILH
        VLTNLTGISKSTSST             TITHLENSLDGDQSPGRCYSPSRQEAGVLETAFLLQPHIQISS TEYKNQLGIFNCVDGHSALLVDKLSILH
Subjt:  VLTNLTGISKSTSSTTMSSDDVAVDVSLTITHLENSLDGDQSPGRCYSPSRQEAGVLETAFLLQPHIQISSGTEYKNQLGIFNCVDGHSALLVDKLSILH

Query:  NHQ
        NHQ
Subjt:  NHQ

KAG8495447.1 hypothetical protein CXB51_013068 [Gossypium anomalum]1.1e-1952.42Show/hide
Query:  AVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSSVL
        A + TLGLG PMY S+G+  I  LGRGEGIGTE+PK+PGV LGD+ TCS A  C+S GYS T PI GP PL+HL  K     +N  + LL   + R SVL
Subjt:  AVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSSVL

Query:  T-NLTGISKSTSSTTMSSDDVAVD
          +L   S STS+   S D   VD
Subjt:  T-NLTGISKSTSSTTMSSDDVAVD

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTGTCACAGGCACCCTTGGGCTCGGGATCCCCATGTATGAGAGTCTGGGAGACATCCTAATCTTCGGGCTAGGCCGAGGCGAAGGTATCGGAACAGAGCTGCC
GAAGAAACCCGGTGTGGGTCTTGGTGACAAGTTCACTTGCTCAAATGCTCGTGCTTGCAACTCTGCTGGGTACTCCTTCACACATCCAATTCTGGGGCCAACTCCACTGC
TCCATCTGCACAGCAAGCGCTTTGGTACATCTATCAATGGTGCCTCTATTCTGCTACCTGGATTCTCTTGCCGCTCAAGTGTGCTAACCAACTTGACTGGTATTTCCAAA
TCGACATCCTCTACAACCATGTCTTCTGACGATGTTGCTGTTGATGTTTCTTTGACCATTACACACCTTGAGAACTCCCTCGACGGCGACCAATCGCCCGGCCGCTGTTA
TAGCCCCTCCAGACAGGAAGCTGGAGTGCTGGAAACGGCCTTTCTTCTTCAGCCCCACATACAAATCTCTAGTGGTACTGAGTACAAAAATCAACTTGGAATCTTCAACT
GTGTTGATGGGCACTCTGCTTTGCTTGTAGATAAGCTTTCCATCCTCCACAACCACCAGACCTTTTGTAGCTTAGTTGCTGCAGAATCCAGCTCACTGACTGGCTTAGTA
ATGGAAGAAGATATAACGACCGGCTTGGGAAGTGAAATTCTGGGAAAGCCAGATATGGAAGGTTTGCAGTGCATGGCGGCGTCTGCTAGAGCTGCAGCTGCAGCTGCCAG
CCATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTGTCACAGGCACCCTTGGGCTCGGGATCCCCATGTATGAGAGTCTGGGAGACATCCTAATCTTCGGGCTAGGCCGAGGCGAAGGTATCGGAACAGAGCTGCC
GAAGAAACCCGGTGTGGGTCTTGGTGACAAGTTCACTTGCTCAAATGCTCGTGCTTGCAACTCTGCTGGGTACTCCTTCACACATCCAATTCTGGGGCCAACTCCACTGC
TCCATCTGCACAGCAAGCGCTTTGGTACATCTATCAATGGTGCCTCTATTCTGCTACCTGGATTCTCTTGCCGCTCAAGTGTGCTAACCAACTTGACTGGTATTTCCAAA
TCGACATCCTCTACAACCATGTCTTCTGACGATGTTGCTGTTGATGTTTCTTTGACCATTACACACCTTGAGAACTCCCTCGACGGCGACCAATCGCCCGGCCGCTGTTA
TAGCCCCTCCAGACAGGAAGCTGGAGTGCTGGAAACGGCCTTTCTTCTTCAGCCCCACATACAAATCTCTAGTGGTACTGAGTACAAAAATCAACTTGGAATCTTCAACT
GTGTTGATGGGCACTCTGCTTTGCTTGTAGATAAGCTTTCCATCCTCCACAACCACCAGACCTTTTGTAGCTTAGTTGCTGCAGAATCCAGCTCACTGACTGGCTTAGTA
ATGGAAGAAGATATAACGACCGGCTTGGGAAGTGAAATTCTGGGAAAGCCAGATATGGAAGGTTTGCAGTGCATGGCGGCGTCTGCTAGAGCTGCAGCTGCAGCTGCCAG
CCATTGTTGAAGATGAAGGTCAGTTTTAAATTCTAAGCTGCCTGCCTGCTTCAGAAGGCAGTTGAGAGTCCATAAAATCATTTTGTTCTGGACTCACCTACCCAGAATAT
GAATATTTATCACTGGCTGCCATTATTGAATTTGTTTTTTTGTTTTAAAAAAATTATGCATCTTTCAATCTCTTATGTCTAGTTGGATGGAAATTTTATTAAATATTTTG
TGTTTTGTGTCC
Protein sequenceShow/hide protein sequence
MVAVTGTLGLGIPMYESLGDILIFGLGRGEGIGTELPKKPGVGLGDKFTCSNARACNSAGYSFTHPILGPTPLLHLHSKRFGTSINGASILLPGFSCRSSVLTNLTGISK
STSSTTMSSDDVAVDVSLTITHLENSLDGDQSPGRCYSPSRQEAGVLETAFLLQPHIQISSGTEYKNQLGIFNCVDGHSALLVDKLSILHNHQTFCSLVAAESSSLTGLV
MEEDITTGLGSEILGKPDMEGLQCMAASARAAAAAASHC