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CmoCh12G005860 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G005860
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionIQ domain-containing protein IQM1-like
Genome locationCmo_Chr12:3605094..3606000
RNA-Seq ExpressionCmoCh12G005860
SyntenyCmoCh12G005860
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB66844.1 hypothetical protein L484_019481 [Morus notabilis]7.1e-0758.62Show/hide
Query:  LWMYLVVIQEEDRLVNLPKSFLGILRPPC-LS-VKRKIFSHCVQRDRWDKEFFKLQSG
        LWMYLV+I+EE+RLVN+  S LG+L P   LS +++K F+  V R RWDKEFF LQ G
Subjt:  LWMYLVVIQEEDRLVNLPKSFLGILRPPC-LS-VKRKIFSHCVQRDRWDKEFFKLQSG

KAA3490539.1 IQ domain-containing protein IQM1-like [Gossypium australe]2.7e-0662.5Show/hide
Query:  EEDRLVNLPKSFLGILRP-PCLSVKRKIFSHCVQRDRWDKEFFKLQSG
        E+DRLVNLP   L +L+P   L  K+K FS C+ RDRWDKEFFKLQ G
Subjt:  EEDRLVNLPKSFLGILRP-PCLSVKRKIFSHCVQRDRWDKEFFKLQSG

KAG6585750.1 hypothetical protein SDJN03_18483, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1751.75Show/hide
Query:  MNHNQLRLIRSTVNWKPRGGFLLRR------------GVEREAHDGVDGDPAVPRGKI------PFPLRLSRTVSF-YVFFTKLSTTNCDFYCPSPVSTP
        MNHNQLRLIRSTVNWKPRG FLL+R            G ER      +G P   R  I       FP R      F +VFFTKLSTTNCD+YC SPVSTP
Subjt:  MNHNQLRLIRSTVNWKPRGGFLLRR------------GVEREAHDGVDGDPAVPRGKI------PFPLRLSRTVSF-YVFFTKLSTTNCDFYCPSPVSTP

Query:  LNHEYFVVFDLELS
        LNHE  ++  +++S
Subjt:  LNHEYFVVFDLELS

KAG6598285.1 hypothetical protein SDJN03_08063, partial [Cucurbita argyrosperma subsp. sororia]7.8e-2288.33Show/hide
Query:  SSLFLWMYLVVIQEEDRLVNLPKSFLGILRPPCLSVKRKIFSHCVQRDRWDKEFFKLQSG
        +SLFLWMYLVVIQEED LVN P SFLGILRPPCLSV+RK FSHCV RDRWDKEFFKLQSG
Subjt:  SSLFLWMYLVVIQEEDRLVNLPKSFLGILRPPCLSVKRKIFSHCVQRDRWDKEFFKLQSG

MBA0835792.1 hypothetical protein [Gossypium armourianum]1.9e-0754.1Show/hide
Query:  SSLFLWMYLVVIQEEDRLVNLPKSFLGILRP-PCLSVKRKIFSHCVQRDRWDKEFFKLQSG
        S L +WM +   +E+DRLVNLP   L +L+P   L  ++K FS C+ RDRWDKEFFKLQ G
Subjt:  SSLFLWMYLVVIQEEDRLVNLPKSFLGILRP-PCLSVKRKIFSHCVQRDRWDKEFFKLQSG

TrEMBL top hitse value%identityAlignment
A0A0B0P6Y9 Graves disease carrier1.6e-0455.56Show/hide
Query:  MYLVVIQEEDRLVNLPKSFLGILRP--PCLSVKRKIFSHCVQRDRWDKEFFKLQ
        MYLV ++ +DRLVNL    L  LRP    L  ++K FS C+  DRWDKEFFKLQ
Subjt:  MYLVVIQEEDRLVNLPKSFLGILRP--PCLSVKRKIFSHCVQRDRWDKEFFKLQ

A0A2P5YAY3 Uncharacterized protein1.6e-0455.56Show/hide
Query:  MYLVVIQEEDRLVNLPKSFLGILRP--PCLSVKRKIFSHCVQRDRWDKEFFKLQ
        MYLV ++ +DRLVNL    L  LRP    L  ++K FS C+  DRWDKEFFKLQ
Subjt:  MYLVVIQEEDRLVNLPKSFLGILRP--PCLSVKRKIFSHCVQRDRWDKEFFKLQ

A0A5B6X8U1 IQ domain-containing protein IQM1-like1.3e-0662.5Show/hide
Query:  EEDRLVNLPKSFLGILRP-PCLSVKRKIFSHCVQRDRWDKEFFKLQSG
        E+DRLVNLP   L +L+P   L  K+K FS C+ RDRWDKEFFKLQ G
Subjt:  EEDRLVNLPKSFLGILRP-PCLSVKRKIFSHCVQRDRWDKEFFKLQSG

A0A7J9JNP8 Uncharacterized protein (Fragment)9.1e-0854.1Show/hide
Query:  SSLFLWMYLVVIQEEDRLVNLPKSFLGILRP-PCLSVKRKIFSHCVQRDRWDKEFFKLQSG
        S L +WM +   +E+DRLVNLP   L +L+P   L  ++K FS C+ RDRWDKEFFKLQ G
Subjt:  SSLFLWMYLVVIQEEDRLVNLPKSFLGILRP-PCLSVKRKIFSHCVQRDRWDKEFFKLQSG

W9RE16 Uncharacterized protein3.4e-0758.62Show/hide
Query:  LWMYLVVIQEEDRLVNLPKSFLGILRPPC-LS-VKRKIFSHCVQRDRWDKEFFKLQSG
        LWMYLV+I+EE+RLVN+  S LG+L P   LS +++K F+  V R RWDKEFF LQ G
Subjt:  LWMYLVVIQEEDRLVNLPKSFLGILRPPC-LS-VKRKIFSHCVQRDRWDKEFFKLQSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCATAATCAGCTCCGTTTGATTCGGTCAACGGTGAACTGGAAGCCACGTGGAGGATTCTTATTGAGGAGAGGAGTGGAGAGGGAGGCCCACGACGGAGTAGACGG
GGATCCGGCGGTTCCGCGAGGAAAGATTCCCTTTCCGTTGCGGTTGTCGAGAACGGTTTCGTTTTATGTCTTTTTCACTAAGCTTTCGACAACGAACTGCGATTTCTACT
GCCCTTCTCCCGTCTCCACTCCGTTAAATCACGAGTATTTTGTAGTTTTCGATTTGGAACTCTCTCTTGGAATTGGGGTTTTGATTTCATCGAAATCTGAATTGGTGGTT
GAAGCGGATACTTATTTTGATGGGCTTTCCTCATTATTCCTGTGGATGTATCTTGTCGTCATTCAAGAAGAAGATCGGCTTGTGAATTTGCCCAAATCCTTTCTGGGTAT
TCTCAGGCCGCCTTGTCTGTCTGTTAAGAGAAAGATCTTCTCACATTGTGTTCAGAGAGATAGATGGGATAAAGAATTCTTCAAGCTGCAGAGCGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCATAATCAGCTCCGTTTGATTCGGTCAACGGTGAACTGGAAGCCACGTGGAGGATTCTTATTGAGGAGAGGAGTGGAGAGGGAGGCCCACGACGGAGTAGACGG
GGATCCGGCGGTTCCGCGAGGAAAGATTCCCTTTCCGTTGCGGTTGTCGAGAACGGTTTCGTTTTATGTCTTTTTCACTAAGCTTTCGACAACGAACTGCGATTTCTACT
GCCCTTCTCCCGTCTCCACTCCGTTAAATCACGAGTATTTTGTAGTTTTCGATTTGGAACTCTCTCTTGGAATTGGGGTTTTGATTTCATCGAAATCTGAATTGGTGGTT
GAAGCGGATACTTATTTTGATGGGCTTTCCTCATTATTCCTGTGGATGTATCTTGTCGTCATTCAAGAAGAAGATCGGCTTGTGAATTTGCCCAAATCCTTTCTGGGTAT
TCTCAGGCCGCCTTGTCTGTCTGTTAAGAGAAAGATCTTCTCACATTGTGTTCAGAGAGATAGATGGGATAAAGAATTCTTCAAGCTGCAGAGCGGATAA
Protein sequenceShow/hide protein sequence
MNHNQLRLIRSTVNWKPRGGFLLRRGVEREAHDGVDGDPAVPRGKIPFPLRLSRTVSFYVFFTKLSTTNCDFYCPSPVSTPLNHEYFVVFDLELSLGIGVLISSKSELVV
EADTYFDGLSSLFLWMYLVVIQEEDRLVNLPKSFLGILRPPCLSVKRKIFSHCVQRDRWDKEFFKLQSG