CuGenDBv2

Gene ID	CmoCh12G005940
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	WRKY domain-containing protein
Genome location	Cmo_Chr12:3643224..3644101
RNA-Seq Expression	CmoCh12G005940
Synteny	CmoCh12G005940
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0016310 - phosphorylation (biological process) GO:0005634 - nucleus (cellular component) GO:0000166 - nucleotide binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0004672 - protein kinase activity (molecular function) GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7020669.1 putative WRKY transcription factor 50, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-31

89.74

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT
        MSYNSNQYPATSESDLAEQPGIEF DSMFDGWLDVNASSLVDTVM+PGYQWDEVDELARNTIHQGEPSS  +R +F T
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT

XP_004144271.1 probable WRKY transcription factor 50 [Cucumis sativus]

1.6e-19

73.91

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS
        MSYNSNQ+  TSESDL+EQPG EFTD MFDGWL+ N+SSL D+VMYP YQ  EVDE   NTI QGEPSS
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS

XP_022951483.1 probable WRKY transcription factor 50 [Cucurbita moschata]

1.6e-32

92.31

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT
        MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS  +R +F T
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT

XP_023002150.1 probable WRKY transcription factor 50 [Cucurbita maxima]

1.4e-31

89.74

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT
        MSYNSNQYP TSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDEL RNTIHQGEPSS  +R +F T
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT

XP_023537438.1 probable WRKY transcription factor 50 [Cucurbita pepo subsp. pepo]

6.2e-32

91.03

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT
        MSYNSNQYPATSESDLAEQPGIEFTDSMF+GWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS  +R +F T
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KD40 WRKY domain-containing protein

7.7e-20

73.91

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS
        MSYNSNQ+  TSESDL+EQPG EFTD MFDGWL+ N+SSL D+VMYP YQ  EVDE   NTI QGEPSS
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS

A0A5A7VG90 Putative WRKY transcription factor 50 isoform X1

8.5e-19

71.01

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS
        MSYNSNQ+  TSESDL+EQPG EFTD MFDGWL+ N+S+L D+VMYP YQ  EVDE   NTI Q EPSS
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS

A0A5D3BLP6 Putative WRKY transcription factor 50 isoform X1

8.5e-19

71.01

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS
        MSYNSNQ+  TSESDL+EQPG EFTD MFDGWL+ N+S+L D+VMYP YQ  EVDE   NTI Q EPSS
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS

A0A6J1GHT6 probable WRKY transcription factor 50

7.9e-33

92.31

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT
        MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS  +R +F T
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT

A0A6J1KN53 probable WRKY transcription factor 50

6.7e-32

89.74

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Query:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT
        MSYNSNQYP TSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDEL RNTIHQGEPSS  +R +F T
Subjt:  MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSS-GKRISFVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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mRNA sequence

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ATGTCGTACAATAGTAACCAGTACCCGGCGACATCCGAGAGCGATCTTGCCGAGCAGCCCGGGATCGAGTTTACGGACTCGATGTTTGACGGGTGGCTCGATGTAAACGC
TTCGTCTCTGGTCGACACGGTGATGTATCCGGGTTATCAATGGGACGAGGTTGATGAGCTTGCTCGGAACACCATCCACCAAGGAGAGCCTAGCAGTGGTAAGCGCATAA
GTTTTGTTACATTTTAATTTGCATTCAAGACGAAATCAGAAGTTGAGATTTTGGATGATGGGTTCAAGTGGAGGAAGTATGGGAAGAAGATGGTGAAGAACAGCCCGAAT
CCGAGGAACTACTACAAATGCTCGGTCGAAGGCTGCCCGGTGAAGAAGAGAGTCGAAAGAGATCGAGATGATCCAAAATACGTGATAACGACCTACGAGGGTGTCCATAC
CCATGAAAGTTCATAAGAAAATATTTCAATCTTTTTTTAGTATGAAAATCGTTATCGGGTACGAGTTCTAGTGTTTTCTCGAATGCATGAATCGTTGTTCTAGCTTCATA
TCCTTTCTCCTCTTTGTGCCATAAACTCGAAGAACACGGTACGGGTAGCGAACGCATAGATTTACAGAGAAATGGCTCTGGATTCAGCCAATATATAACAAAGTAGCCTT
ATGATATGAAGACATGAAAACTTTTGCTTTGATCAATTCCTTTACAGTGAAACAAAATGAAAAGAAATAGTAATGGG

Protein sequence

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MSYNSNQYPATSESDLAEQPGIEFTDSMFDGWLDVNASSLVDTVMYPGYQWDEVDELARNTIHQGEPSSGKRISFVTF

CmoCh12G005940 (gene) of Cucurbita moschata (Rifu) v1 genome