; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G006080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G006080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWD repeat-containing protein DWA2-like
Genome locationCmo_Chr12:3800034..3801787
RNA-Seq ExpressionCmoCh12G006080
SyntenyCmoCh12G006080
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
InterPro domainsIPR040323 - EARP and GARP complex-interacting protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585778.1 WD repeat-containing protein DWA2, partial [Cucurbita argyrosperma subsp. sororia]8.4e-6997.1Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS---TGRDNEKEEAL
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS   TGRDNEKEEAL
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS---TGRDNEKEEAL

Query:  DVEDLETWLEVSGKGKDEESGKCKDEDSVRTKGNHLKG
        DVEDLETWLEVSGKGKDEESGKCKDEDSVRTKGNHLKG
Subjt:  DVEDLETWLEVSGKGKDEESGKCKDEDSVRTKGNHLKG

KAG7020715.1 WD repeat-containing protein DWA2 [Cucurbita argyrosperma subsp. argyrosperma]9.9e-7098.52Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKEEALDVE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKEEALDVE
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKEEALDVE

Query:  DLETWLEVSGKGKDEESGKCKDEDSVRTKGNHLKG
        DLETWLEVSGKGKDEESGKCKDEDS RTKGNHLKG
Subjt:  DLETWLEVSGKGKDEESGKCKDEDSVRTKGNHLKG

XP_004144228.1 WD repeat-containing protein DWA2 [Cucumis sativus]3.9e-4295.56Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPF+QRIFSTVFSTG +
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD

XP_022153181.1 WD repeat-containing protein DWA2 [Momordica charantia]7.9e-4395.65Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG + E
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

XP_022951371.1 WD repeat-containing protein DWA2-like [Cucurbita moschata]2.7e-4393.62Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG  ++++
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKE

TrEMBL top hitse value%identityAlignment
A0A0A0KDH1 WD_REPEATS_REGION domain-containing protein1.9e-4295.56Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPF+QRIFSTVFSTG +
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD

A0A1S3CMG4 WD repeat-containing protein DWA2-like isoform X12.5e-4295.56Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS G +
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD

A0A5A7TA39 WD repeat-containing protein DWA2-like isoform X12.5e-4295.56Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFS G +
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRD

A0A6J1DJW1 WD repeat-containing protein DWA23.8e-4395.65Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENE HLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG + E
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

A0A6J1GHE6 WD repeat-containing protein DWA2-like1.3e-4393.62Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKE
        MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG  ++++
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKE

SwissProt top hitse value%identityAlignment
Q3KPT3 EARP-interacting protein homolog2.3e-0831.33Show/hide
Query:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        YGL++QAR +    A+TD   F+ GT SL+ +N+ H+I      + +    L  H  EIW + + P D+ + +T ++   D++
Subjt:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

Q5M8I4 EARP-interacting protein homolog7.8e-0932.53Show/hide
Query:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        YGL++QAR +A   A+TD   F+ GT SL+ +N+ H+I      + +    L  H  EIW +++ P D+ + +T ++   D++
Subjt:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

Q6DUZ9 EARP-interacting protein homolog3.0e-0832.53Show/hide
Query:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE
        YGL++QAR +    A+TD   F+ GT SLK +N+ H+I      + +    L     EIW +++ P D+ + +T +S   D++
Subjt:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNE

Q6NPN9 WD repeat-containing protein DWA21.2e-4189.77Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG
        MQGGSSGIGYGLKYQARCI+DVKAD DHTSF+TGTLSLK+ENE HL+RLSS GSEL+CEGLFSHPNEIWDLAS PFDQRIFSTVFSTG
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG

Q86A97 EARP-interacting protein homolog8.3e-1137.18Show/hide
Query:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFST
        YGL  + R ++ + A+ D   F+ GT +L++ENE  L+  +  G  + C  +F HP EI  + SCPFD  +F +V++T
Subjt:  YGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFST

Arabidopsis top hitse value%identityAlignment
AT1G20540.1 Transducin/WD40 repeat-like superfamily protein7.6e-4490.91Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG
        MQGGSSGIGYGLKYQ+RCI+DVKADTD+TSF+TGTLSLK+ENE HL+RLSS GSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG

AT1G76260.1 DWD (DDB1-binding WD40 protein) hypersensitive to ABA 28.4e-4389.77Show/hide
Query:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG
        MQGGSSGIGYGLKYQARCI+DVKAD DHTSF+TGTLSLK+ENE HL+RLSS GSEL+CEGLFSHPNEIWDLAS PFDQRIFSTVFSTG
Subjt:  MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGTGGATCATCAGGCATTGGCTACGGGCTGAAATACCAGGCTCGATGCATCGCTGATGTCAAAGCAGATACAGATCACACCAGCTTCATCACCGGTACTCTCAG
TCTCAAAGACGAAAATGAGGCGCATTTGATTCGTCTCTCGTCGAGTGGATCCGAGCTCATATGCGAGGGTTTGTTTTCTCACCCCAATGAGATCTGGGACCTCGCATCTT
GCCCCTTCGACCAACGCATTTTCTCTACCGTCTTCTCCACTGGTAGAGACAATGAGAAAGAAGAAGCATTAGATGTAGAAGATTTAGAGACATGGTTGGAAGTCTCGGGT
AAAGGTAAGGATGAAGAATCGGGTAAATGCAAAGATGAAGATTCAGTAAGGACAAAAGGGAATCACTTGAAGGGCTAG
mRNA sequenceShow/hide mRNA sequence
TTTGATCATCGTTGAGTGTTTCATTATCCACCATGCAAGGTGGATCATCAGGCATTGGCTACGGGCTGAAATACCAGGCTCGATGCATCGCTGATGTCAAAGCAGATACA
GATCACACCAGCTTCATCACCGGTACTCTCAGTCTCAAAGACGAAAATGAGGCGCATTTGATTCGTCTCTCGTCGAGTGGATCCGAGCTCATATGCGAGGGTTTGTTTTC
TCACCCCAATGAGATCTGGGACCTCGCATCTTGCCCCTTCGACCAACGCATTTTCTCTACCGTCTTCTCCACTGGTAGAGACAATGAGAAAGAAGAAGCATTAGATGTAG
AAGATTTAGAGACATGGTTGGAAGTCTCGGGTAAAGGTAAGGATGAAGAATCGGGTAAATGCAAAGATGAAGATTCAGTAAGGACAAAAGGGAATCACTTGAAGGGCTAG
Protein sequenceShow/hide protein sequence
MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKDENEAHLIRLSSSGSELICEGLFSHPNEIWDLASCPFDQRIFSTVFSTGRDNEKEEALDVEDLETWLEVSG
KGKDEESGKCKDEDSVRTKGNHLKG