CuGenDBv2

Gene ID	CmoCh12G006150
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr12:3843401..3844968
RNA-Seq Expression	CmoCh12G006150
Synteny	CmoCh12G006150
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7020722.1 hypothetical protein SDJN02_17409, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-102

97.63

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRPPLARSPLRLRSRQVLQSNST SLQTPPGSLT SLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFYDEYSARRNERLKRKKAESVA+IKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENK PPLAVDLERSVITAGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
         KIGTRRVRRI
Subjt:  TKIGTRRVRRI

XP_022946511.1 uncharacterized protein LOC111450549 [Cucurbita moschata]

3.4e-85

84.36

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRPPLARSPLRLRSR+V QSNS TS+QTPPGSLTKSLK  RPSDLQ +ELRPEYRTI+CEL+ALASMV+MELGCEES  GGVGDQL VNSS+L
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFYDEYSARRNERLKRKKAES +EIKTPY LGVTVESSKRHSSKK+ NSLRKSV AA+SVE+  AAPRYLLRSMTKENK PPL V+LE+SVI AGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
         KI TR+VRRI
Subjt:  TKIGTRRVRRI

XP_022951112.1 uncharacterized protein LOC111454057 [Cucurbita moschata]

3.9e-105

100

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
        TKIGTRRVRRI
Subjt:  TKIGTRRVRRI

XP_023002835.1 uncharacterized protein LOC111496581 [Cucurbita maxima]

3.8e-100

96.21

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRP LARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYR ITCELQ LASMVRMELGCEESGTGGVGDQLGVN STL
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFYDEYSARRNERLKRKKAESVA+IKTPYRLGVTVESSKRHSSKKV NSLRKSVSAAYSVERKEAAPRYLLRSMTKENK PPLAVDLERSVITAGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
         KIGTRRVRRI
Subjt:  TKIGTRRVRRI

XP_023538091.1 uncharacterized protein LOC111798964 [Cucurbita pepo subsp. pepo]

1.5e-96

94.31

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRPPLA      RSRQVLQSNST SLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGD+LGVNSSTL
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFYDEYSARRNERLKRKKAESVAEIKTPY+LGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENK PPLAVDLERSVITAGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
         KIGTR VRRI
Subjt:  TKIGTRRVRRI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI16 uncharacterized protein LOC111020689

1.8e-84

83.02

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSK+RSDRRPPLARSPLRLRSR+VLQSNSTT+LQTPPGSLTKS KTNRPSD Q SELRPEYRTI+CEL+ALASMVRMELGCEES  GGVGDQL VNSS L
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERS-VITAG
        FERGRFY+EYSARRNERLKRKKAE+VAEIKTPY LGVTVESSKRHSSKK   SLRKSV+AAYSVER EA PRY+LRSMTKENK PPL ++ E+S    AG
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERS-VITAG

Query:  ETKIGTRRVRRI
        E K  TRR RRI
Subjt:  ETKIGTRRVRRI

A0A6J1G3W4 uncharacterized protein LOC111450549

1.7e-85

84.36

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRPPLARSPLRLRSR+V QSNS TS+QTPPGSLTKSLK  RPSDLQ +ELRPEYRTI+CEL+ALASMV+MELGCEES  GGVGDQL VNSS+L
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFYDEYSARRNERLKRKKAES +EIKTPY LGVTVESSKRHSSKK+ NSLRKSV AA+SVE+  AAPRYLLRSMTKENK PPL V+LE+SVI AGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
         KI TR+VRRI
Subjt:  TKIGTRRVRRI

A0A6J1GGR9 uncharacterized protein LOC111454057

1.9e-105

100

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
        TKIGTRRVRRI
Subjt:  TKIGTRRVRRI

A0A6J1KI16 uncharacterized protein LOC111494019

9.1e-84

82.46

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRPPLARSPLRLRSR+V QSNS TS+QTPPGSLTKSLK  RPSDL  +ELRPEYRTI+CEL+ALASMV+MELGCEES  GGVGDQL VNSS+L
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFY+EYSARRNERLKRKKA+S +EIKTPY LGVTVESSKRHSSKK+ NSLRKSV AA+SVE+  AAPRYLLRSMTKENK PPL V+LE+SVI AGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
         KI TR++RRI
Subjt:  TKIGTRRVRRI

A0A6J1KQ31 uncharacterized protein LOC111496581

1.8e-100

96.21

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL
        MSKMRSDRRP LARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYR ITCELQ LASMVRMELGCEESGTGGVGDQLGVN STL
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTL

Query:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE
        FERGRFYDEYSARRNERLKRKKAESVA+IKTPYRLGVTVESSKRHSSKKV NSLRKSVSAAYSVERKEAAPRYLLRSMTKENK PPLAVDLERSVITAGE
Subjt:  FERGRFYDEYSARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGE

Query:  TKIGTRRVRRI
         KIGTRRVRRI
Subjt:  TKIGTRRVRRI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G42330.1 unknown protein

2.9e-29

45.83

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Query:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTP-PGSLTKSLKTNRPSDLQAS-ELRPEYRTITCELQALASMVRMELGCEESGTGGVG-DQLGVNS
        MSKMRS  +PPL +SP+RLRSRQVL S    SLQTP PG L       R SD+  + + + +Y +I+ E+ ALA MV+ E   EE        + L  NS
Subjt:  MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTP-PGSLTKSLKTNRPSDLQAS-ELRPEYRTITCELQALASMVRMELGCEESGTGGVG-DQLGVNS

Query:  STLFERGRFYDEYSARRNERLKRKKAESVAE---IK-TPYRLGVTVE---SSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVD
          LFERGRFY+EYSA+RNERL+RKK E   E   +K TPY LGV  E   + +R ++KK   S++K+V    S+    + PRY LRSM KEN+ PPL ++
Subjt:  STLFERGRFYDEYSARRNERLKRKKAESVAE---IK-TPYRLGVTVE---SSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVD

Query:  LERSVITAGETKIGTR
        +  S + +  T+ G R
Subjt:  LERSVITAGETKIGTR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTAAGATGAGGTCTGATCGCAGGCCGCCGCTCGCCAGATCGCCCTTGCGGCTCAGATCTCGCCAGGTTCTTCAATCGAATTCAACAACCTCGTTACAAACGCCGCC
CGGTTCTTTGACGAAATCGCTGAAAACGAACCGTCCTTCGGATCTGCAAGCATCGGAGCTCCGACCTGAGTATCGGACGATTACTTGCGAATTACAGGCTCTGGCTAGCA
TGGTTAGGATGGAATTAGGATGTGAAGAGTCTGGAACTGGCGGAGTAGGTGATCAATTAGGCGTGAATTCGAGTACTCTGTTCGAGCGAGGGAGATTCTACGATGAGTAT
TCCGCGAGGAGGAACGAGAGGCTCAAGCGAAAGAAAGCCGAATCCGTGGCCGAGATCAAGACTCCCTATAGACTCGGTGTGACGGTTGAATCTTCAAAGCGACACAGTTC
AAAGAAGGTTGTTAATAGCTTGAGGAAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAAGGAGGCGGCTCCTAGGTATTTGCTGCGGAGCATGACGAAGGAAAACAAGA
TGCCACCATTAGCGGTGGATCTAGAGAGATCTGTGATTACTGCAGGAGAAACAAAAATCGGCACTCGAAGAGTCAGAAGAATCTGA

mRNA sequence

Show/hide mRNA sequence

GACCGTTGAGACGCTCCCCTCGTTTAAATCCCAATTCAAACTAATCGCAAAAACTCTGCAACGAAACCAAACTCATTCTCGGATTCCAGCTACAAAACAGCATTCTGATC
TCTCTATTTCTTCTTCTTCCTCCCTCTAGGTATTTGATTTCTTACTTCAATGTCTAAGATGAGGTCTGATCGCAGGCCGCCGCTCGCCAGATCGCCCTTGCGGCTCAGAT
CTCGCCAGGTTCTTCAATCGAATTCAACAACCTCGTTACAAACGCCGCCCGGTTCTTTGACGAAATCGCTGAAAACGAACCGTCCTTCGGATCTGCAAGCATCGGAGCTC
CGACCTGAGTATCGGACGATTACTTGCGAATTACAGGCTCTGGCTAGCATGGTTAGGATGGAATTAGGATGTGAAGAGTCTGGAACTGGCGGAGTAGGTGATCAATTAGG
CGTGAATTCGAGTACTCTGTTCGAGCGAGGGAGATTCTACGATGAGTATTCCGCGAGGAGGAACGAGAGGCTCAAGCGAAAGAAAGCCGAATCCGTGGCCGAGATCAAGA
CTCCCTATAGACTCGGTGTGACGGTTGAATCTTCAAAGCGACACAGTTCAAAGAAGGTTGTTAATAGCTTGAGGAAATCGGTTTCTGCGGCGTATTCTGTGGAGCGGAAG
GAGGCGGCTCCTAGGTATTTGCTGCGGAGCATGACGAAGGAAAACAAGATGCCACCATTAGCGGTGGATCTAGAGAGATCTGTGATTACTGCAGGAGAAACAAAAATCGG
CACTCGAAGAGTCAGAAGAATCTGAAGAATTAGGGATCAGATCTGTGCGTCAGGCTTGTGTATGTTTGGTCTGCTTAAGAAATTTCCAATTCGGAAAAATCTGACCAAGT
TTCTACCTCTCAACCACACTTCGCCAGCAGAGAGGCATATAGAACACAAATAGCTTTTAGGGCTCCTTCTTACAGATTCTGCGAATTCTACCAAGTTTTTGTCATTTCTT
TTCGCTTTTTTTATATGAAAGATAGCATTGGAATAGACACAGAAAATCCTACAAATTGTATGTGAATGAGATCGGTCTTGAATGTGAATTCATCATTTCTATGTCTCTAA
TAATTGTTAGAATATAATCGTCAAAGCTATCCGTCCTGCGATTTTTGATGATTGTAAGTGCAAGTTCCGAAGTCCAATACTATCTTAGTCGTTAATGTTTTTGTTTTTTC
TAATTATTCAAGCTAATTTCATACTATTTTGTTTTTCTACTTTTTTATTTTTAAAATTTTGCCTCTTGTTTTTCTACAATATTTCGAGTCTCGCCTTCCT

Protein sequence

Show/hide protein sequence

MSKMRSDRRPPLARSPLRLRSRQVLQSNSTTSLQTPPGSLTKSLKTNRPSDLQASELRPEYRTITCELQALASMVRMELGCEESGTGGVGDQLGVNSSTLFERGRFYDEY
SARRNERLKRKKAESVAEIKTPYRLGVTVESSKRHSSKKVVNSLRKSVSAAYSVERKEAAPRYLLRSMTKENKMPPLAVDLERSVITAGETKIGTRRVRRI

CmoCh12G006150 (gene) of Cucurbita moschata (Rifu) v1 genome