; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G006280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G006280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionincreased DNA methylation 3-like
Genome locationCmo_Chr12:3928513..3929429
RNA-Seq ExpressionCmoCh12G006280
SyntenyCmoCh12G006280
Gene Ontology termsGO:1901537 - positive regulation of DNA demethylation (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR039321 - Increased DNA methylation 2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144249.1 increased DNA methylation 3 [Cucumis sativus]8.5e-6791.61Show/hide
Query:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT
        MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PP
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

XP_008464812.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo]8.5e-6791.61Show/hide
Query:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT
        MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PP
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

XP_022951227.1 increased DNA methylation 3-like [Cucurbita moschata]9.1e-77100Show/hide
Query:  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS
        MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS
Subjt:  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP

XP_023002579.1 increased DNA methylation 3-like [Cucurbita maxima]1.7e-7599.32Show/hide
Query:  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS
        MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS
Subjt:  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADS PPP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP

XP_038884247.1 increased DNA methylation 3 [Benincasa hispida]1.7e-6792.31Show/hide
Query:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT
        MEGHGD    KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVMTGPG+LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        VSFKLPGPVDPRLS PSFRPDGILEVVVMKSRA PTVADSHPP
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

TrEMBL top hitse value%identityAlignment
A0A0A0KDF2 SHSP domain-containing protein4.1e-6791.61Show/hide
Query:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT
        MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PP
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

A0A1S3CMV5 increased DNA methylation 3 isoform X24.1e-6791.61Show/hide
Query:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT
        MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PP
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

A0A5D3CM92 Increased DNA methylation 3 isoform X24.1e-6791.61Show/hide
Query:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT
        MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFT

Query:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP
        VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRA PTVADS PP
Subjt:  VSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPP

A0A6J1GI33 increased DNA methylation 3-like4.4e-77100Show/hide
Query:  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS
        MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS
Subjt:  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP

A0A6J1KJX1 increased DNA methylation 3-like8.3e-7699.32Show/hide
Query:  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS
        MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS
Subjt:  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGS

Query:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP
        FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADS PPP
Subjt:  FTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP

SwissProt top hitse value%identityAlignment
Q84K79 Alpha-crystallin domain-containing protein 22.37.8e-2347.11Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEG-VMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPV
        K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D  +   EI+ DG++ I+G   TG   +   + +++M  Q LCPPG FT++F+LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEG-VMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMK
             + +F  DG+LE VV K
Subjt:  DPRLSSPSFRPDGILEVVVMK

Q8RWL4 Increased DNA methylation 26.0e-2344.12Show/hide
Query:  GHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGV-MTGPGLLKDSSAMYQMKVQQLCPPGSFTV
        G    +  KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++ +G+V + GV  TG   +K  S +++M+ + LCPPG+F+V
Subjt:  GHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGV-MTGPGLLKDSSAMYQMKVQQLCPPGSFTV

Query:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTV
        SF+LPGPV P   S +F  DGILE VVMK+    TV
Subjt:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTV

Q9SYQ0 Increased DNA methylation 33.0e-3052.03Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDG+V +EG  T G   +K  S +++M +++LCPPG F + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

Arabidopsis top hitse value%identityAlignment
AT1G20870.1 HSP20-like chaperones superfamily protein2.1e-3152.03Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDG+V +EG  T G   +K  S +++M +++LCPPG F + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPV

Query:  DPRLSSPSFRPDGILEVVVMKSR
        DPRL SP+FR DGI E V+++ +
Subjt:  DPRLSSPSFRPDGILEVVVMKSR

AT1G54840.1 HSP20-like chaperones superfamily protein4.3e-2444.12Show/hide
Query:  GHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGV-MTGPGLLKDSSAMYQMKVQQLCPPGSFTV
        G    +  KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++ +G+V + GV  TG   +K  S +++M+ + LCPPG+F+V
Subjt:  GHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGV-MTGPGLLKDSSAMYQMKVQQLCPPGSFTV

Query:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTV
        SF+LPGPV P   S +F  DGILE VVMK+    TV
Subjt:  SFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTV

AT1G76440.1 HSP20-like chaperones superfamily protein8.0e-3960.48Show/hide
Query:  HMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLP
        H K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +GRV I+GV+    +  D+  +Y+M+VQQLCPPG F+++F LP
Subjt:  HMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

AT1G76440.2 HSP20-like chaperones superfamily protein8.0e-3960.48Show/hide
Query:  HMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLP
        H K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +GRV I+GV+    +  D+  +Y+M+VQQLCPPG F+++F LP
Subjt:  HMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK

AT1G76440.3 HSP20-like chaperones superfamily protein8.0e-3960.48Show/hide
Query:  HMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLP
        H K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +GRV I+GV+    +  D+  +Y+M+VQQLCPPG F+++F LP
Subjt:  HMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLP

Query:  GPVDPRLSSPSFRPDGILEVVVMK
        G VDPRL SP+FR DGI EVVV+K
Subjt:  GPVDPRLSSPSFRPDGILEVVVMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCATGGAAGGCCATGGCGATCATATGAAGCTGAAGCCATCAGTTATTCTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCGATTGGTCTTGTCGATATTGG
CGTGAGTGAAGGTGCATACCTTTTCCGCGTTGCATTGCCTGGTGTACGGAAGGATCGAAGTAAGGTAAAGTTTGAGATCAAAAGCGATGGTAGGGTTCACATTGAAGGAG
TGATGACAGGTCCAGGCCTTTTGAAGGATTCATCAGCTATGTATCAGATGAAAGTGCAGCAACTGTGTCCTCCCGGATCTTTTACGGTTTCTTTTAAACTGCCTGGACCA
GTAGATCCACGGTTGTCGTCTCCTAGTTTTCGGCCCGATGGCATTCTGGAAGTAGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCCATCCTCCGCCGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGTCATGGAAGGCCATGGCGATCATATGAAGCTGAAGCCATCAGTTATTCTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCGATTGGTCTTGTCGATATTGG
CGTGAGTGAAGGTGCATACCTTTTCCGCGTTGCATTGCCTGGTGTACGGAAGGATCGAAGTAAGGTAAAGTTTGAGATCAAAAGCGATGGTAGGGTTCACATTGAAGGAG
TGATGACAGGTCCAGGCCTTTTGAAGGATTCATCAGCTATGTATCAGATGAAAGTGCAGCAACTGTGTCCTCCCGGATCTTTTACGGTTTCTTTTAAACTGCCTGGACCA
GTAGATCCACGGTTGTCGTCTCCTAGTTTTCGGCCCGATGGCATTCTGGAAGTAGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCCATCCTCCGCCGTG
AGTATGATGGAGGTAGGTACATGGTTTTGCTGTCTCCTTATGTTAGTTTTCTATGAAGAAAAAGGGTCACTTTACAACGTAGTTTAGCTCATTAACTTGTTGGTTTTGGA
GTTTGAATTATGTGTTTAACAAGGCCTTGTCATTAATATTATAACTTCAATATTTAAATCACATGTTGAATGTATTTATTAGGGATTATGGGAAACATTCTAGGTGGACT
AGTTTTGTACACCTAGAAAATGAAACCCTTTTCTCTTGGTCTTAAACACGTCTCGTTGGCCTATTAACCCGCTCGAAGCTAGTCCATCTAGGATGTGTTCTCTAATCAAA
ACCATTTTCATTTCATATCAAGTAAGATAGTGTTCGGT
Protein sequenceShow/hide protein sequence
MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGP
VDPRLSSPSFRPDGILEVVVMKSRAPPTVADSHPPP