CuGenDBv2

Gene ID	CmoCh12G006510
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	zinc knuckle (CCHC-type) family protein
Genome location	Cmo_Chr12:4187024..4199488
RNA-Seq Expression	CmoCh12G006510
Synteny	CmoCh12G006510
Gene Ontology terms	GO:2000767 - positive regulation of cytoplasmic translation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0003727 - single-stranded RNA binding (molecular function) GO:0003729 - mRNA binding (molecular function) GO:0008270 - zinc ion binding (molecular function) GO:0045182 - translation regulator activity (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6585819.1 DNA-binding protein HEXBP, partial [Cucurbita argyrosperma subsp. sororia]

2.6e-263

99.55

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQ HCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNR+NCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

XP_022951579.1 uncharacterized protein LOC111454354 isoform X1 [Cucurbita moschata]

3.6e-265

100

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

XP_022951581.1 uncharacterized protein LOC111454354 isoform X2 [Cucurbita moschata]

6.6e-251

96.18

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKS                 GNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

XP_023002093.1 uncharacterized protein LOC111496065 isoform X1 [Cucurbita maxima]

2.5e-250

95.51

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSI+MKGIKFYCKNCGREGHRRHYCPELK DSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLN KPMSA ++        KGHS RNCSKSEMRN NKG HYPQHQNPGNVLSLNLI GDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNRQNCPNIDTKVNHTTRR+TYSCKLCHEKGHNSRTCPVI MNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

XP_023538286.1 uncharacterized protein LOC111799114 [Cucurbita pepo subsp. pepo]

4.5e-247

95.06

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Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVC+GKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQ  CTICGGKGHSSRNCSKS                 GNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNR+NCPNIDTKVNHT+RRRTYSCKLCHEKGHNSRTCPVIKMNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KS13 Uncharacterized protein

1.7e-204

80.22

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSS LC SI AL P  WR  N RFF+LLQS RC+ FAPRFVA L +NDDSVAIPKP PLAFDP EE+YGL VDLKPRNS SSAPEPRSWFGPNGQYI+EL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLK LNAKTG+FSKRMKIIHRDP LHAQRVAAIKKAKGSAEARKRTSEALKAFFSDP+NR+KRS AMKG+KFYCKNCGREGHRRHYCPELK DSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNR+TC+KS LN  P++ATIQ HC ICG KGH+ RNC KS+        H   HQ   NVL  NLI   R +NE+ RVRQY CRIC+E+G
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        H+++NCP+ D + N  + RR+YSCKLCHEKGHN RTCP    NNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

A0A6J1GHY9 uncharacterized protein LOC111454354 isoform X2

3.2e-251

96.18

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKS                 GNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

A0A6J1GJ81 uncharacterized protein LOC111454354 isoform X1

1.8e-265

100

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

A0A6J1KKD0 uncharacterized protein LOC111496065 isoform X2

1.6e-237

92.13

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSI+MKGIKFYCKNCGREGHRRHYCPELK DSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLN KPMSA ++        KGHS RNCSKS                 GNVLSLNLI GDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNRQNCPNIDTKVNHTTRR+TYSCKLCHEKGHNSRTCPVI MNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

A0A6J1KMZ5 uncharacterized protein LOC111496065 isoform X1

1.2e-250

95.51

Show/hide

Query:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
        MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL
Subjt:  MSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIREL

Query:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
        PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI
Subjt:  PCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKI

Query:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR
        SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSI+MKGIKFYCKNCGREGHRRHYCPELK DSIDRR
Subjt:  SRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRR

Query:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG
        FRCRVCGEKGHNRRTCKKSRLN KPMSA ++        KGHS RNCSKSEMRN NKG HYPQHQNPGNVLSLNLI GDRMTNESSRVRQYRCRICEENG
Subjt:  FRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENG

Query:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL
        HNRQNCPNIDTKVNHTTRR+TYSCKLCHEKGHNSRTCPVI MNNL
Subjt:  HNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCPVIKMNNL

SwissProt top hits

e value

%identity

Alignment

Q04832 DNA-binding protein HEXBP

2.8e-10

30.29

Show/hide

Query:  CKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNL
        C+NCG+EGH    CPE      +R   C  CGE+GH  R C     +G   + T    C  CG  GH SR+C  S    + KG    +    G+ LS + 
Subjt:  CKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEKGHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNL

Query:  ------------IKGDRMTNESSRVRQYRCRICEENGHNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCP
                     K  R   +        C  C + GH  ++CPN     +    R   +C  C + GH SR CP
Subjt:  ------------IKGDRMTNESSRVRQYRCRICEENGHNRQNCPNIDTKVNHTTRRRTYSCKLCHEKGHNSRTCP

Arabidopsis top hits

e value

%identity

Alignment

AT5G20220.1 zinc knuckle (CCHC-type) family protein

7.9e-125

58.65

Show/hide

Query:  RRTNLRFFILLQSKRCVGFAPRFVACLSS------NDDSVAIPKP--VPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRG
        R+   RF  LL       F PR ++  SS      ND SV+  +     + +DP EE++  GVD KPR  +  + EPRSWFGPNGQYIRELPCP+CRGRG
Subjt:  RRTNLRFFILLQSKRCVGFAPRFVACLSS------NDDSVAIPKP--VPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRG

Query:  YAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNA
        Y  C+ CGIERSR DC  C GKGI+TC +CLGD VIWEESIDERPWEKARS+SP R+KEDDEVDNLEIK  +++KSKR+YQSP PEVG KISRSLKSLNA
Subjt:  YAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNA

Query:  KTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEK
        KTGLFSKRMKIIHRDP LHAQRVAAIKKAKG+  ARK  SE++KAFFS+P NR++RS++MKG KFYCKNCG+EGHRRHYCPEL G + DR+FRCR CG K
Subjt:  KTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEK

Query:  GHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENGHNRQNCPN
        GHNRRTC KS+       +T    C ICG +GH+SR C K            P   NP          G+    +      Y C  C++ GHN + CP+
Subjt:  GHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENGHNRQNCPN

AT5G20220.2 zinc knuckle (CCHC-type) family protein

7.9e-125

58.65

Show/hide

Query:  RRTNLRFFILLQSKRCVGFAPRFVACLSS------NDDSVAIPKP--VPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRG
        R+   RF  LL       F PR ++  SS      ND SV+  +     + +DP EE++  GVD KPR  +  + EPRSWFGPNGQYIRELPCP+CRGRG
Subjt:  RRTNLRFFILLQSKRCVGFAPRFVACLSS------NDDSVAIPKP--VPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRG

Query:  YAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNA
        Y  C+ CGIERSR DC  C GKGI+TC +CLGD VIWEESIDERPWEKARS+SP R+KEDDEVDNLEIK  +++KSKR+YQSP PEVG KISRSLKSLNA
Subjt:  YAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNA

Query:  KTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEK
        KTGLFSKRMKIIHRDP LHAQRVAAIKKAKG+  ARK  SE++KAFFS+P NR++RS++MKG KFYCKNCG+EGHRRHYCPEL G + DR+FRCR CG K
Subjt:  KTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEK

Query:  GHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENGHNRQNCPN
        GHNRRTC KS+       +T    C ICG +GH+SR C K            P   NP          G+    +      Y C  C++ GHN + CP+
Subjt:  GHNRRTCKKSRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENGHNRQNCPN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTGTATGGGGTTGGGTTGGCCAGATTTATGCGATGTCCTCACCACTCTGTTCGTCAATTCGGGCATTGGCACCGCAGTGTTGGCGGCGGACGAACTTGAGATTCTT
CATATTGCTTCAATCCAAGAGATGTGTAGGCTTCGCGCCTCGCTTCGTTGCTTGTTTGAGCAGCAATGACGACTCTGTTGCAATCCCCAAACCGGTGCCGCTCGCCTTCG
ATCCTGTGGAGGAGATGTACGGACTTGGCGTCGATTTAAAACCAAGGAATTCAAATTCCAGCGCTCCTGAACCCAGGTCCTGGTTTGGTCCAAATGGTCAGTATATTAGA
GAGCTACCGTGTCCAAGTTGCCGAGGCAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCAGACTGTTCCGTGTGTAATGGAAAGGGTATAGTGAC
CTGCCACCAATGCTTGGGAGATCGTGTCATATGGGAAGAGTCCATTGATGAACGACCATGGGAGAAAGCACGCTCCACTTCTCCATTAAGAATGAAGGAAGACGATGAAG
TTGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGATTGAAGATCAGCCGATCATTAAAAAGTCTCAAT
GCCAAAACAGGTCTATTTAGTAAGAGAATGAAGATAATCCATCGTGACCCCACTCTTCATGCCCAGAGAGTGGCTGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCCAG
AAAACGTACTTCTGAAGCTTTGAAAGCATTCTTCAGTGATCCAAAAAATCGTCAAAAGCGGAGCATTGCAATGAAAGGAATAAAATTTTACTGTAAAAACTGTGGACGTG
AGGGGCATCGAAGACACTATTGTCCAGAACTTAAGGGTGATTCAATTGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGAAGGACCTGTAAGAAG
TCTAGGTTGAATGGTAAACCGATGAGCGCAACAATTCAGTGTCATTGCACGATATGTGGTGGTAAGGGTCACAGCAGTAGGAACTGTTCGAAGTCCGAGATGAGAAATTC
AAATAAAGGTATACATTATCCCCAACATCAGAATCCTGGCAATGTGTTGAGCCTGAATTTGATCAAGGGAGATAGGATGACTAATGAAAGCAGCAGAGTGAGGCAGTATC
GTTGTAGGATCTGCGAAGAAAATGGTCACAATCGGCAGAATTGTCCCAATATCGACACGAAAGTTAACCATACAACTCGTAGAAGAACATACAGCTGCAAACTATGTCAT
GAAAAAGGGCATAACAGTAGAACATGCCCAGTTATAAAGATGAACAATCTGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSVWGWVGQIYAMSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIR
ELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLN
AKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEKGHNRRTCKK
SRLNGKPMSATIQCHCTICGGKGHSSRNCSKSEMRNSNKGIHYPQHQNPGNVLSLNLIKGDRMTNESSRVRQYRCRICEENGHNRQNCPNIDTKVNHTTRRRTYSCKLCH
EKGHNSRTCPVIKMNNL

CmoCh12G006510 (gene) of Cucurbita moschata (Rifu) v1 genome