; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G006610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G006610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionReticulon domain-containing protein
Genome locationCmo_Chr12:4329343..4338357
RNA-Seq ExpressionCmoCh12G006610
SyntenyCmoCh12G006610
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003388 - Reticulon
IPR044177 - Reticulon-like protein B22/B23


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020756.1 Reticulon-like protein B22 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-8880.95Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVK--------------------------------------------VIVSLYALSVLGRLVSGVTVAYTGLCMLCI
        LANTIGAAESVLRVAATGHDKRLFVK                                            VIVSLYALSVLGRLVSGVTVAYTGLCMLCI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVK--------------------------------------------VIVSLYALSVLGRLVSGVTVAYTGLCMLCI

Query:  YMVLENSESISAFISPFLRRGNDPISHQDSI
        YMVLENSESISAFISPFLRRGNDPISHQDSI
Subjt:  YMVLENSESISAFISPFLRRGNDPISHQDSI
XP_008465703.1 PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]2.0e-8489.84Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+  SHQD+I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
XP_011655303.1 reticulon-like protein B22 [Cucumis sativus]2.0e-8489.3Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISP LRRGN+  SHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
XP_022952032.1 reticulon-like protein B22 isoform X1 [Cucurbita moschata]5.5e-95100Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
XP_038889154.1 reticulon-like protein B22 [Benincasa hispida]2.1e-8689.84Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI  R+E L++ EMANR+I+CKTEVGKP VALICGSL+YYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSM+AW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPF+RRGNDP SHQD+I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
TrEMBL top hitse value%identityAlignment
A0A0A0KQM7 Reticulon domain-containing protein9.6e-8589.3Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI GR E L+D +MA+RSI+CKTEVGKP VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQ+SQDTANSMIAW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISP LRRGN+  SHQD I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
A0A1S3CPH6 reticulon-like protein B22 isoform X29.6e-8589.84Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI GR E L+D  MA+RSI+CKTEVGKP VAL CGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLFVKV+V LYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFLRRGN+  SHQD+I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
A0A6J1D9M0 reticulon-like protein B223.0e-7883.42Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        M+QI  RSES    EMANR+I   T++GKP+VALICGSLVYYHCA+RNSSLLSLVADVFIVLLCSLAILGLLFRHMN+SVPVDPLEWQISQDTAN ++AW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLF+KV+V LYALSVLGRLVSGVTVAYTGLCMLC+YMVLENSES S  + PF RRGNDP SHQD+I
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
A0A6J1GJ96 reticulon-like protein B22 isoform X12.7e-95100Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
A0A6J1I734 reticulon-like protein B22 isoform X12.7e-95100Show/hide
Query:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
        MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW
Subjt:  MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAW

Query:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
        LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
Subjt:  LANTIGAAESVLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI
SwissProt top hitse value%identityAlignment
P0C941 Reticulon-like protein B238.2e-4971.01Show/hide
Query:  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK +  LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
        KV++ LY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
Q8GWH5 Reticulon-like protein B221.3e-5468.32Show/hide
Query:  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK +  LI G+LVYYHCAYRN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDS
        KV++ LY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN  I  Q++
Subjt:  KVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDS
Arabidopsis top hitse value%identityAlignment
AT1G16825.1 Reticulon family protein5.8e-5071.01Show/hide
Query:  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK +  LI G+LVY+HCA RN++LLSL++DV IVLL SLAILGLLFRH+NVSVPVDPLEWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFV
Subjt:  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
        KV++ LY L+ LGR++SGVT+AY GLC+ C+ M+  +S
Subjt:  KVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENS
AT1G78895.1 Reticulon family protein9.2e-5668.32Show/hide
Query:  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV
        E+GK +  LI G+LVYYHCAYRN++LLSL +DVFIVLLCSLAILGLLFR +NVSVPVDPLEWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFV
Subjt:  EVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFV

Query:  KVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDS
        KV++ LY LS LGRL+SGVTVAY GLC+ C+ M+ + S+S+   +   L+RGN  I  Q++
Subjt:  KVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAATTGAGGGGAGGAGCGAGAGCTTGAAGGACGCAGAAATGGCGAATCGCTCCATCAGCTGCAAGACAGAAGTAGGCAAACCCCTTGTAGCTCTGATTTGCGG
TTCATTGGTTTATTACCATTGCGCTTATCGAAATTCCAGTCTCCTCTCCCTCGTCGCGGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCC
GCCATATGAATGTCTCTGTACCTGTGGATCCACTTGAGTGGCAAATTTCGCAGGATACTGCTAATAGTATGATAGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCT
GTACTGAGAGTCGCAGCAACAGGGCATGACAAGAGGCTTTTTGTGAAGGTCATTGTCAGTCTTTACGCTCTCTCAGTCCTTGGAAGACTGGTTTCAGGTGTTACGGTTGC
CTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAATCGATCAGTGCTTTTATTTCTCCTTTTCTTAGGAGAGGAAACGACCCTATTTCACACC
AAGATTCCATCTAA
mRNA sequenceShow/hide mRNA sequence
AATTCACTGAGGGTTGACGATGAACCAAATTGAGGGGAGGAGCGAGAGCTTGAAGGACGCAGAAATGGCGAATCGCTCCATCAGCTGCAAGACAGAAGTAGGCAAACCCC
TTGTAGCTCTGATTTGCGGTTCATTGGTTTATTACCATTGCGCTTATCGAAATTCCAGTCTCCTCTCCCTCGTCGCGGATGTTTTCATCGTTCTCCTTTGCTCTCTCGCC
ATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCTGTACCTGTGGATCCACTTGAGTGGCAAATTTCGCAGGATACTGCTAATAGTATGATAGCTTGGTTAGCCAATAC
CATAGGTGCGGCTGAGTCTGTACTGAGAGTCGCAGCAACAGGGCATGACAAGAGGCTTTTTGTGAAGGTCATTGTCAGTCTTTACGCTCTCTCAGTCCTTGGAAGACTGG
TTTCAGGTGTTACGGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAATCGATCAGTGCTTTTATTTCTCCTTTTCTTAGGAGAGGA
AACGACCCTATTTCACACCAAGATTCCATCTAATCTTCACTGGCTGTAACCCCGTTCTGTCACTGTAGATAGATACATCTTGTGAATATTACCGTTAACAGAATCAGACA
GTCATTATATGATGGTTGTTTAGGTGGAGTAATAAATTTATTTGATGGGGGAAAAAAAAAAAAAATTCCTGAGTTCATTATTGATATTGATTACTGTTCATCATTATGAG
TATCGGTTGTTTTCTGTGAAGTTGAGTGGTGTGAAAAAGAAAATATTTGGCAGGATTGTCATTTGGGTTATACCTTTTTTGTACCAACTTTTAAGTTATAAGGAGATGGA
AACTTGTTCAGGAGCTAGTTCTGAATTCTCCTTTTTTGTACCTTTTTTGTTTATACTTTTTTTTTAAATAATAAATGTAAACATTTAATGGATAAA
Protein sequenceShow/hide protein sequence
MNQIEGRSESLKDAEMANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAES
VLRVAATGHDKRLFVKVIVSLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI