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CmoCh12G006870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G006870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:4937698..4938155
RNA-Seq ExpressionCmoCh12G006870
SyntenyCmoCh12G006870
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4279088.1 unnamed protein product [Prunus armeniaca]4.2e-3660Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSISACV
        MKNVAKCDTWCELQ+P NHRVFERKLRP+P GRGH CLGVT RCP I       +L GA  GLPCA S GW K +         +WL Q   C+S   CV
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSISACV

Query:  PPLY----------DALDATPGQAGLPAEFKHINKRRKRNLQGFP
           +           A +ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  PPLY----------DALDATPGQAGLPAEFKHINKRRKRNLQGFP

GEV87049.1 hypothetical protein [Tanacetum cinerariifolium]2.6e-3361.54Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGW-----LKIESSAFVVVTLRWLIQPRYCVS
        MKNVAKCDTWCELQ+P NHRVFERKLRP P GRGHVCLGVTHR      P +S  L GA +GLPCA   GW     L+      VVV    L        
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGW-----LKIESSAFVVVTLRWLIQPRYCVS

Query:  ISACVP---PLYDALDATPGQAGLPAEFKHINKRRKRNLQGFP
         S+  P   P  DA  ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  ISACVP---PLYDALDATPGQAGLPAEFKHINKRRKRNLQGFP

KAG8611767.1 hypothetical protein MANES_S026816v8 [Manihot esculenta]1.5e-2854.93Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTL-RWLIQPRYCVSISAC
        MKN AKCDTWCELQ+PANHRVFERKLRP+PSGRGHVCLGVT   P    P R     G      C+      K ESSA +   +  W          SA 
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTL-RWLIQPRYCVSISAC

Query:  VPP------LYDALDATPGQAGLPAEFKHINKRRKRNLQGFP
          P        +A  ATPGQAG PAEFKHINKRRKRNL GFP
Subjt:  VPP------LYDALDATPGQAGLPAEFKHINKRRKRNLQGFP

KAG8611946.1 hypothetical protein MANES_S044716v8 [Manihot esculenta]1.5e-2854.93Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTL-RWLIQPRYCVSISAC
        MKN AKCDTWCELQ+PANHRVFERKLRP+PSGRGHVCLGVT   P    P R     G      C+      K ESSA +   +  W          SA 
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTL-RWLIQPRYCVSISAC

Query:  VPP------LYDALDATPGQAGLPAEFKHINKRRKRNLQGFP
          P        +A  ATPGQAG PAEFKHINKRRKRNL GFP
Subjt:  VPP------LYDALDATPGQAGLPAEFKHINKRRKRNLQGFP

KMS64667.1 hypothetical protein BVRB_017900 [Beta vulgaris subsp. vulgaris]5.3e-3154.73Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSI----
        MKNVAK DTWCEL +P NHRVFERKLRP+P GRGHVCLGVTHR       L  +   G   GLPC   +GW K  +  + +   R L++ +   S+    
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSI----

Query:  SACVP---------PLYDALDATPGQAGLPAEFKHINKRRKRNLQGFP
        SA  P         PL     ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  SACVP---------PLYDALDATPGQAGLPAEFKHINKRRKRNLQGFP

TrEMBL top hitse value%identityAlignment
A0A0J7YM11 Uncharacterized protein2.6e-3154.73Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSI----
        MKNVAK DTWCEL +P NHRVFERKLRP+P GRGHVCLGVTHR       L  +   G   GLPC   +GW K  +  + +   R L++ +   S+    
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSI----

Query:  SACVP---------PLYDALDATPGQAGLPAEFKHINKRRKRNLQGFP
        SA  P         PL     ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  SACVP---------PLYDALDATPGQAGLPAEFKHINKRRKRNLQGFP

A0A2K1RA43 Uncharacterized protein8.0e-2572.29Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVT
        MKNVAKCDTWCELQ+P NHRVFERKLRP P GRGHVCLGVTHR P+   PL  +  AGA  GLP AP+ GW KIESSA V  T
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVT

A0A3N7FVM0 Uncharacterized protein6.2e-2571.08Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVT
        MKNVAKCDTWCELQ+P NHRVFERKLRP P GRGHVCLGVTHR P+     R    AGA  GLP AP+ GW KIESSA V  T
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVT

A0A6J5UZ50 Uncharacterized protein2.0e-3660Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSISACV
        MKNVAKCDTWCELQ+P NHRVFERKLRP+P GRGH CLGVT RCP I       +L GA  GLPCA S GW K +         +WL Q   C+S   CV
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSISACV

Query:  PPLY----------DALDATPGQAGLPAEFKHINKRRKRNLQGFP
           +           A +ATPGQAGLPAEFKHINKRRKRNLQGFP
Subjt:  PPLY----------DALDATPGQAGLPAEFKHINKRRKRNLQGFP

U5FGY4 Uncharacterized protein6.2e-2571.08Show/hide
Query:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVT
        MKNVAKCDTWCELQ+P NHRVFERKLRP P GRGHVCLGVTHR P+     R    AGA  GLP AP+ GW KIESSA V  T
Subjt:  MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGGATCCCGCGAACCACCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCTTCTGGCCGAGGGCACGTCTG
CCTGGGAGTCACGCATCGCTGCCCCTACATACAACACCCACTTCGGTCTGTTGCATTGGCGGGGGCACATGTTGGCCTCCCTTGCGCACCGTCGCACGGATGGCTTAAAA
TTGAGTCCTCGGCATTTGTTGTCGTGACACTACGGTGGTTGATTCAACCTCGGTACTGTGTCTCGATCTCAGCTTGCGTGCCTCCTCTTTACGATGCTCTCGACGCGACC
CCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGGATCCCGCGAACCACCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCTTCTGGCCGAGGGCACGTCTG
CCTGGGAGTCACGCATCGCTGCCCCTACATACAACACCCACTTCGGTCTGTTGCATTGGCGGGGGCACATGTTGGCCTCCCTTGCGCACCGTCGCACGGATGGCTTAAAA
TTGAGTCCTCGGCATTTGTTGTCGTGACACTACGGTGGTTGATTCAACCTCGGTACTGTGTCTCGATCTCAGCTTGCGTGCCTCCTCTTTACGATGCTCTCGACGCGACC
CCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCTTAG
Protein sequenceShow/hide protein sequence
MKNVAKCDTWCELQDPANHRVFERKLRPEPSGRGHVCLGVTHRCPYIQHPLRSVALAGAHVGLPCAPSHGWLKIESSAFVVVTLRWLIQPRYCVSISACVPPLYDALDAT
PGQAGLPAEFKHINKRRKRNLQGFP