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CmoCh12G006990 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G006990
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:5347197..5348206
RNA-Seq ExpressionCmoCh12G006990
SyntenyCmoCh12G006990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8081008.1 hypothetical protein GUJ93_ZPchr0007g4786 [Zizania palustris]5.9e-0649.38Show/hide
Query:  DSPSLKEIPESSFRSCSMLDSRTRCTPTRRDLIPSQADCTVRLVERDANISGGTDRNMAANASRSSPVLDCFSFLWLDSVP
        DSPS +    +S RSC  L SRTR TPTR  L  S A   VRL     +IS GT+R +AA A RSS VL  F+ + LD +P
Subjt:  DSPSLKEIPESSFRSCSMLDSRTRCTPTRRDLIPSQADCTVRLVERDANISGGTDRNMAANASRSSPVLDCFSFLWLDSVP
XP_023535519.1 uncharacterized protein LOC111796933 [Cucurbita pepo subsp. pepo]8.5e-2159.5Show/hide
Query:  ELFLGFDAHRSSYAIVDYLCGFGELFLRFEVSHHEKGRLILLGLSHMGLFGRLLVPELAPAILAQVTSLPIVRALDWPVISRLLLLLIRLFPVHAPSRFP
        ELFLGF          + + GFG +      S+HE+  L+LLGLSHMGLFG LL+PELAPAI AQV+SLP VRALD P I R LLLLI +FP  AP R P
Subjt:  ELFLGFDAHRSSYAIVDYLCGFGELFLRFEVSHHEKGRLILLGLSHMGLFGRLLVPELAPAILAQVTSLPIVRALDWPVISRLLLLLIRLFPVHAPSRFP

Query:  RLLTAFAA-GGPIALAGACTD
         LLTAFAA GGP+ALAG   +
Subjt:  RLLTAFAA-GGPIALAGACTD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCCGTGCCCTTCGATCTCGACGACGGAGCCATCGCCGAATTTCACCGTCCCGCGAATCCCCGAGTCAAGCTCGGAGAACGCAGACTTGGCCCCGGTCATATGGTT
TGATGCCCCCGTGTCGAGGACCCATCGCCGGTGCATTTGTTATGCACAGTTGGAGTTCTTCCTCGGGTTCGACGTTCACCGGAGCAGTTATGCCGTCGTCGATTACCTCT
GTGGATTTGGGGAGCTCTTCCTCGGGTTCGACGTTCACCGGAGCAGTTATGCCGTCGTCGATTACCTCTGTGGATTTGGGGAGCTCTTCCTCGGGTTCGACGCTCACCGG
AGCAGTTATGCCATCGTCGATTACCTCTGTGGATTTGGGGAGCTCTTCCTCAGGTTCGAGGTCAGTCACCATGAAAAGGGCCGGCTCATCCTCCTCGGATTGAGCCACAT
GGGCCTTTTCGGCCGTCTCCTTGTTCCTGAGCTTGCTCCAGCAATTCTTGCTCAGGTGACCTCTCTTCCCATAGTACGAGCACTGGATTGGCCCGTCATCAGTCGACTCC
TCCTTCTTTTGATCCGCCTCTTTCCTGTGCATGCGCCATCGAGATTTCCACGGCTTCTTACCGCCTTTGCGGCTGGAGGGCCCATTGCTCTCGCCGGTGCGTGCACGGAT
TCGCCGTCCTTAAAGGAGATCCCCGAGAGCTCCTTCCGCAGCTGCTCAATGTTGGATTCCCGCACTCGCTGTACACCGACCCGACGGGATTTAATTCCTTCCCAGGCCGA
TTGCACGGTGCGCTTGGTGGAGAGAGATGCCAACATCTCTGGGGGCACAGATCGTAATATGGCGGCGAACGCCAGCCGATCCTCCCCGGTACTCGATTGTTTCTCCTTCC
TCTGGCTCGACAGCGTGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCCGTGCCCTTCGATCTCGACGACGGAGCCATCGCCGAATTTCACCGTCCCGCGAATCCCCGAGTCAAGCTCGGAGAACGCAGACTTGGCCCCGGTCATATGGTT
TGATGCCCCCGTGTCGAGGACCCATCGCCGGTGCATTTGTTATGCACAGTTGGAGTTCTTCCTCGGGTTCGACGTTCACCGGAGCAGTTATGCCGTCGTCGATTACCTCT
GTGGATTTGGGGAGCTCTTCCTCGGGTTCGACGTTCACCGGAGCAGTTATGCCGTCGTCGATTACCTCTGTGGATTTGGGGAGCTCTTCCTCGGGTTCGACGCTCACCGG
AGCAGTTATGCCATCGTCGATTACCTCTGTGGATTTGGGGAGCTCTTCCTCAGGTTCGAGGTCAGTCACCATGAAAAGGGCCGGCTCATCCTCCTCGGATTGAGCCACAT
GGGCCTTTTCGGCCGTCTCCTTGTTCCTGAGCTTGCTCCAGCAATTCTTGCTCAGGTGACCTCTCTTCCCATAGTACGAGCACTGGATTGGCCCGTCATCAGTCGACTCC
TCCTTCTTTTGATCCGCCTCTTTCCTGTGCATGCGCCATCGAGATTTCCACGGCTTCTTACCGCCTTTGCGGCTGGAGGGCCCATTGCTCTCGCCGGTGCGTGCACGGAT
TCGCCGTCCTTAAAGGAGATCCCCGAGAGCTCCTTCCGCAGCTGCTCAATGTTGGATTCCCGCACTCGCTGTACACCGACCCGACGGGATTTAATTCCTTCCCAGGCCGA
TTGCACGGTGCGCTTGGTGGAGAGAGATGCCAACATCTCTGGGGGCACAGATCGTAATATGGCGGCGAACGCCAGCCGATCCTCCCCGGTACTCGATTGTTTCTCCTTCC
TCTGGCTCGACAGCGTGCCATAA
Protein sequenceShow/hide protein sequence
MVPCPSISTTEPSPNFTVPRIPESSSENADLAPVIWFDAPVSRTHRRCICYAQLEFFLGFDVHRSSYAVVDYLCGFGELFLGFDVHRSSYAVVDYLCGFGELFLGFDAHR
SSYAIVDYLCGFGELFLRFEVSHHEKGRLILLGLSHMGLFGRLLVPELAPAILAQVTSLPIVRALDWPVISRLLLLLIRLFPVHAPSRFPRLLTAFAAGGPIALAGACTD
SPSLKEIPESSFRSCSMLDSRTRCTPTRRDLIPSQADCTVRLVERDANISGGTDRNMAANASRSSPVLDCFSFLWLDSVP