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CmoCh12G007130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G007130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCytochrome c biogenesis B
Genome locationCmo_Chr12:5418002..5420131
RNA-Seq ExpressionCmoCh12G007130
SyntenyCmoCh12G007130
Gene Ontology termsGO:0015886 - heme transport (biological process)
GO:0017004 - cytochrome complex assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015232 - heme transporter activity (molecular function)
InterPro domainsIPR003544 - Cytochrome c-type biogenesis protein CcmB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4093308.1 unnamed protein product [Lactuca saligna]4.1e-2183.82Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLR
        VLT LCGIHSRSALGITSS G NSS+NP+TSPTSLPQPFLVPLLKQNGFMF +RLVIP RS LF Q R
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLR

CAB4289998.1 unnamed protein product [Prunus armeniaca]6.3e-1465.62Show/hide
Query:  SSKKVITPSCPMLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMGIPTGELEESMEFDLCAL
        S KKV TP+CPMLL PNTIYKWDLHYEQAVRKTA F + RNNLG+MG       E+M+F + A+
Subjt:  SSKKVITPSCPMLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMGIPTGELEESMEFDLCAL

KAF3452239.1 hypothetical protein FNV43_RR08337 [Rhamnella rubrinervis]5.1e-1667.69Show/hide
Query:  WSSKKVITPSCPMLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMGIPTGELEESMEFDLCAL
        WS KKVITP+CPMLL PNTIYKWDLHYEQAVRKTA F + RNNLG+MG       E+M+F + A+
Subjt:  WSSKKVITPSCPMLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMGIPTGELEESMEFDLCAL

QHN95481.1 Putative cytochrome c biogenesis ccmB-like mitochondrial protein [Arachis hypogaea]4.5e-2084.38Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLF
        V TLLCGIHSR ALGITSS GWNSS+NPTTSPTS PQPFLVPLLK NGFMF +RLVIP RS LF
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLF

RYQ84094.1 hypothetical protein Ahy_B10g102999 [Arachis hypogaea]1.2e-2858.09Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLRWYPEIDGIPPGNTRKKYMN-WSSKKVITPSCP
        V TLLCGIHSR ALGITSS GWNSS+NPTTSPTS P       ++   F  L  +     SS F  L  +P    I   +  K  +  WS KKV TP+CP
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLRWYPEIDGIPPGNTRKKYMN-WSSKKVITPSCP

Query:  MLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMG
        MLL PNTIYKWDLHYEQAVRKTA F + RNNLG+MG
Subjt:  MLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMG

TrEMBL top hitse value%identityAlignment
A0A444X2Y8 Uncharacterized protein5.7e-2958.09Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLRWYPEIDGIPPGNTRKKYMN-WSSKKVITPSCP
        V TLLCGIHSR ALGITSS GWNSS+NPTTSPTS P       ++   F  L  +     SS F  L  +P    I   +  K  +  WS KKV TP+CP
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLRWYPEIDGIPPGNTRKKYMN-WSSKKVITPSCP

Query:  MLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMG
        MLL PNTIYKWDLHYEQAVRKTA F + RNNLG+MG
Subjt:  MLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMG

A0A453P263 Uncharacterized protein1.1e-1190.7Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPL
        VLTLLCGIHSRSALGITSS GWNSS+NPTTSPT LPQPF VPL
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPL

A0A6J5VVW0 Uncharacterized protein3.0e-1465.62Show/hide
Query:  SSKKVITPSCPMLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMGIPTGELEESMEFDLCAL
        S KKV TP+CPMLL PNTIYKWDLHYEQAVRKTA F + RNNLG+MG       E+M+F + A+
Subjt:  SSKKVITPSCPMLLGPNTIYKWDLHYEQAVRKTADFCQVRNNLGQMGIPTGELEESMEFDLCAL

A0A6N2N4H3 Uncharacterized protein9.8e-2182.35Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLR
        VLTL+CGIHSRSALGITSS GWNSS+NPTTSPT LPQ FLVPLLKQN FMF +RLVI  RS LFFQ R
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLR

A0A6S7MXW4 Uncharacterized protein2.0e-2183.82Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLR
        VLT LCGIHSRSALGITSS G NSS+NP+TSPTSLPQPFLVPLLKQNGFMF +RLVIP RS LF Q R
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLR

SwissProt top hitse value%identityAlignment
P38454 Putative cytochrome c biogenesis ccmB-like mitochondrial protein2.1e-0458.54Show/hide
Query:  MFSKHVLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLP
        +    + TL+CGIHS  ALGITS+ GWNS +N TT PT LP
Subjt:  MFSKHVLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLP

P93280 Putative cytochrome c biogenesis ccmB-like mitochondrial protein1.2e-0747.3Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQN--------GFMFLYRLVIPPRSSLFFQ
        VLTLLCGIHS  ALGITSS GWNSS+N TT PT LP       ++          G+ FL+  + P   S+  Q
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQN--------GFMFLYRLVIPPRSSLFFQ

Arabidopsis top hitse value%identityAlignment
ATMG00110.1 cytochrome C biogenesis 2064.8e-1291.67Show/hide
Query:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLP
        VLTLLCGIHSRSALGITSS GWNSS+NPTTSPT LP
Subjt:  VLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTCGAAACACGTCTTGACTCTGTTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGTCGTGGTTGGAATAGCTCGAAAAATCCAACCACTTCACC
TACTTCATTGCCCCAACCCTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTTATCGATTGGTTATTCCTCCCCGTTCGTCTCTCTTTTTCCAATTGCGGT
GGTATCCCGAGATAGATGGAATTCCTCCCGGGAACACACGAAAGAAATATATGAACTGGAGTTCCAAGAAGGTAATAACTCCATCCTGTCCGATGCTTCTTGGGCCAAAT
ACAATATACAAGTGGGACCTGCACTATGAGCAAGCTGTGCGAAAAACCGCTGATTTTTGCCAGGTTCGCAACAACTTGGGCCAAATGGGAATCCCGACAGGTGAATTAGA
AGAAAGCATGGAGTTTGATTTGTGTGCATTAAAGCCATGTGCTACTACATTTTTCAGGTTAAGGCAAGGCATTCCTGTACGGCTGACGACGGCATCGCAACTCGAGATCA
TGGCACATGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTCGAAACACGTCTTGACTCTGTTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGTCGTGGTTGGAATAGCTCGAAAAATCCAACCACTTCACC
TACTTCATTGCCCCAACCCTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTTATCGATTGGTTATTCCTCCCCGTTCGTCTCTCTTTTTCCAATTGCGGT
GGTATCCCGAGATAGATGGAATTCCTCCCGGGAACACACGAAAGAAATATATGAACTGGAGTTCCAAGAAGGTAATAACTCCATCCTGTCCGATGCTTCTTGGGCCAAAT
ACAATATACAAGTGGGACCTGCACTATGAGCAAGCTGTGCGAAAAACCGCTGATTTTTGCCAGGTTCGCAACAACTTGGGCCAAATGGGAATCCCGACAGGTGAATTAGA
AGAAAGCATGGAGTTTGATTTGTGTGCATTAAAGCCATGTGCTACTACATTTTTCAGGTTAAGGCAAGGCATTCCTGTACGGCTGACGACGGCATCGCAACTCGAGATCA
TGGCACATGCATAG
Protein sequenceShow/hide protein sequence
MFSKHVLTLLCGIHSRSALGITSSRGWNSSKNPTTSPTSLPQPFLVPLLKQNGFMFLYRLVIPPRSSLFFQLRWYPEIDGIPPGNTRKKYMNWSSKKVITPSCPMLLGPN
TIYKWDLHYEQAVRKTADFCQVRNNLGQMGIPTGELEESMEFDLCALKPCATTFFRLRQGIPVRLTTASQLEIMAHA