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CmoCh12G007250 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G007250
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:5519506..5519963
RNA-Seq ExpressionCmoCh12G007250
SyntenyCmoCh12G007250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEW05828.1 hypothetical protein [Tanacetum cinerariifolium]6.4e-0656Show/hide
Query:  LSWGLALREKA-RKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSVCSRVGSKVRRP--PKRNPNGLLSAA
        L   LALREKA R+K F  L+P     +CVH+RGNRNASCSAGVAWS SV         RP   +RNP  L SAA
Subjt:  LSWGLALREKA-RKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSVCSRVGSKVRRP--PKRNPNGLLSAA

KAF1856618.1 hypothetical protein Lal_00038484 [Lupinus albus]7.6e-1554.78Show/hide
Query:  TRASFPACGSSVRTSSDLRELADRSLSHE--RTFSELLRN--GRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGN
        TRASFPACGSSV T SDLRELAD SLS +   + SE  RN  G   T P  A     S  L N   L  G     + +  + +FL    IIF+CVHRRGN
Subjt:  TRASFPACGSSVRTSSDLRELADRSLSHE--RTFSELLRN--GRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGN

Query:  RNASCSAGVAWSGSV
        RNAS SAGVAWSGSV
Subjt:  RNASCSAGVAWSGSV

KAF3775269.1 hypothetical protein EJ110_NYTH50594 [Nymphaea thermarum]2.2e-0647.3Show/hide
Query:  LPNNCTLS-----WGLALREKARKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSVCSRVGSKVRRPPKR
        L N+CTLS     W   ++     K+F  L+P ++I   VHRRGNRNASCSAGV WSGSV          PP R
Subjt:  LPNNCTLS-----WGLALREKARKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSVCSRVGSKVRRPPKR

KEH37513.1 hypothetical protein MTR_2g040760 [Medicago truncatula]1.1e-0851.72Show/hide
Query:  SLSHERTFSELLRNGRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSV
        SL HERTFS+L+RNG H     L       S  P    L        K   KVF+F    +  F+CVHRRGNRNASCSAGVAWSGSV
Subjt:  SLSHERTFSELLRNGRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSV

QVJ97946.1 hypothetical protein [Apium graveolens]9.3e-0551.72Show/hide
Query:  TRASFPACGSSVRTSSDLRELADRSLSHE--RTFSELLRN--GRHETGPNLAWFS-------FFSSTLPNNCTLSWGLALREKARKK
        TRASFPACGSSV TSSDLRELADRSLS +   + SE  RN  G   T P  AW          F + +P    L   LALREK R++
Subjt:  TRASFPACGSSVRTSSDLRELADRSLSHE--RTFSELLRN--GRHETGPNLAWFS-------FFSSTLPNNCTLSWGLALREKARKK

TrEMBL top hitse value%identityAlignment
A0A072V832 Uncharacterized protein5.1e-0951.72Show/hide
Query:  SLSHERTFSELLRNGRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSV
        SL HERTFS+L+RNG H     L       S  P    L        K   KVF+F    +  F+CVHRRGNRNASCSAGVAWSGSV
Subjt:  SLSHERTFSELLRNGRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSV

A0A0A0L6E8 Uncharacterized protein4.5e-0538.3Show/hide
Query:  TRASFPACGSSVRTSSDLRELADRSLSHERTFSELLRNGRHETGPNLAWFSFFSSTLPNNCTLSWGLALREK-ARKKVFLFLLPFQIIFKCVHRRGNRNA
        TRASFPACGSSV TSSDLRELADRS     + SE  RN          W        P +       + RE    KKV LF L       C  R   R  
Subjt:  TRASFPACGSSVRTSSDLRELADRSLSHERTFSELLRNGRHETGPNLAWFSFFSSTLPNNCTLSWGLALREK-ARKKVFLFLLPFQIIFKCVHRRGNRNA

Query:  SC----SAGVAWSGSVCSRVGSKVRRPPKRNPNGLLSAAKL
         C       + W  SV      ++       P GLLSAAKL
Subjt:  SC----SAGVAWSGSVCSRVGSKVRRPPKRNPNGLLSAAKL

A0A385G2A5 Uncharacterized protein1.0e-0480.56Show/hide
Query:  KVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSV
        KVFLF     IIF+CVHRRGNRNAS SAGVAWSGSV
Subjt:  KVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGSV

A0A6A5L987 Uncharacterized protein3.7e-1554.78Show/hide
Query:  TRASFPACGSSVRTSSDLRELADRSLSHE--RTFSELLRN--GRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGN
        TRASFPACGSSV T SDLRELAD SLS +   + SE  RN  G   T P  A     S  L N   L  G     + +  + +FL    IIF+CVHRRGN
Subjt:  TRASFPACGSSVRTSSDLRELADRSLSHE--RTFSELLRN--GRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGN

Query:  RNASCSAGVAWSGSV
        RNAS SAGVAWSGSV
Subjt:  RNASCSAGVAWSGSV

A0A6D2JSC0 Uncharacterized protein5.0e-0460Show/hide
Query:  EKARKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGS
        E A++   L +   +IIF+CVHRRGN NASCSAG+AWSG+
Subjt:  EKARKKVFLFLLPFQIIFKCVHRRGNRNASCSAGVAWSGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTGGTTCATATCACACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCGTGAGAACTTCTTCAGATTTGCGTGAACTAGCGGACCGATCACTCAGTCAT
GAGCGAACCTTTTCAGAACTGCTTAGGAATGGGCGCCACGAGACCGGCCCAAATCTAGCCTGGTTCTCTTTCTTCTCATCTACCCTTCCCAACAATTGTACCTTG
TCTTGGGGCTTGGCTTTACGAGAGAAAGCCCGCAAAAAAGTCTTTCTCTTCCTTCTCCCGTTCCAGATCATATTCAAGTGTGTCCACAGAAGAGGAAATCGCAAT
GCATCTTGCTCAGCAGGCGTAGCTTGGAGTGGGAGTGTATGTAGTAGGGTGGGTAGTAAGGTAAGGAGGCCACCAAAGAGGAACCCAAACGGCCTATTAAGCGCA
GCTAAGCTAGGAGAAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTTGGTTCATATCACACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCGTGAGAACTTCTTCAGATTTGCGTGAACTAGCGGACCGATCACTCAGTCAT
GAGCGAACCTTTTCAGAACTGCTTAGGAATGGGCGCCACGAGACCGGCCCAAATCTAGCCTGGTTCTCTTTCTTCTCATCTACCCTTCCCAACAATTGTACCTTG
TCTTGGGGCTTGGCTTTACGAGAGAAAGCCCGCAAAAAAGTCTTTCTCTTCCTTCTCCCGTTCCAGATCATATTCAAGTGTGTCCACAGAAGAGGAAATCGCAAT
GCATCTTGCTCAGCAGGCGTAGCTTGGAGTGGGAGTGTATGTAGTAGGGTGGGTAGTAAGGTAAGGAGGCCACCAAAGAGGAACCCAAACGGCCTATTAAGCGCA
GCTAAGCTAGGAGAAAGCTAG
Protein sequenceShow/hide protein sequence
MSLGSYHTRASFPACGSSVRTSSDLRELADRSLSHERTFSELLRNGRHETGPNLAWFSFFSSTLPNNCTLSWGLALREKARKKVFLFLLPFQIIFKCVHRRGNRN
ASCSAGVAWSGSVCSRVGSKVRRPPKRNPNGLLSAAKLGES