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CmoCh12G007470 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G007470
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCytochrome c oxidase subunit 1
Genome locationCmo_Chr12:5852972..5854559
RNA-Seq ExpressionCmoCh12G007470
SyntenyCmoCh12G007470
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEV70224.1 hypothetical protein [Tanacetum cinerariifolium]6.3e-2092.86Show/hide
Query:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG
        MGSPPPAGSEKVVLKFR VNNMVIAPASTGSDNKSGNAVTR D T RGDLCIVIPG
Subjt:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG

GHA80952.1 hypothetical protein GCM10010345_95330 [Streptomyces canarius]1.6e-1889.29Show/hide
Query:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG
        MGSPPPAGS+KVVLKFR VNNMVIAPASTGSDNKS NAVTR D TKRG+LCIVIPG
Subjt:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG

KAF1856875.1 hypothetical protein Lal_00001714 [Lupinus albus]3.1e-1991.07Show/hide
Query:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG
        MGSPPPAGSEKVVLKFR VNN+VIAPASTGSDNKSGNAVT  D TKRGDLCIVIPG
Subjt:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG

PHT46107.1 hypothetical protein CQW23_15265 [Capsicum baccatum]6.3e-2092.86Show/hide
Query:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG
        MGSPPPAGSEKVVLKFR VNNMVIAPASTGSDNKSGNAVTR D T RGDLCIVIPG
Subjt:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG

PNY07357.1 hypothetical protein L195_g003851 [Trifolium pratense]2.6e-1387.23Show/hide
Query:  STSWQQE-KGDLVLYSGDLFPTEARKLPSCPKSYSVNRKGKLTHPSA
        ST WQQE KGDLVLYSGDLFPTEARK PSCP+S+SVNRKGK THPSA
Subjt:  STSWQQE-KGDLVLYSGDLFPTEARKLPSCPKSYSVNRKGKLTHPSA

TrEMBL top hitse value%identityAlignment
A0A251U8D1 Uncharacterized protein3.1e-2092.86Show/hide
Query:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG
        MGSPPPAGSEKVVLKFR VNNMVIAPASTGSDNKSGNAVTR D T RGDLCIVIPG
Subjt:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG

A0A2G2WLJ2 Uncharacterized protein3.1e-2092.86Show/hide
Query:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG
        MGSPPPAGSEKVVLKFR VNNMVIAPASTGSDNKSGNAVTR D T RGDLCIVIPG
Subjt:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG

A0A2K3NWF0 Uncharacterized protein1.2e-1387.23Show/hide
Query:  STSWQQE-KGDLVLYSGDLFPTEARKLPSCPKSYSVNRKGKLTHPSA
        ST WQQE KGDLVLYSGDLFPTEARK PSCP+S+SVNRKGK THPSA
Subjt:  STSWQQE-KGDLVLYSGDLFPTEARKLPSCPKSYSVNRKGKLTHPSA

A0A6A5L804 Uncharacterized protein8.1e-1378.85Show/hide
Query:  SFLLGSTSWQQE-KGDLVLYSGDLFPTEARKLPSCPKSYSVNRKGKLTHPSA
        S  + ST WQQE K DLVLYSGDLFPTEARK PSCP+S+SVNRKGK THPSA
Subjt:  SFLLGSTSWQQE-KGDLVLYSGDLFPTEARKLPSCPKSYSVNRKGKLTHPSA

A0A6A5LBR8 Uncharacterized protein1.5e-1991.07Show/hide
Query:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG
        MGSPPPAGSEKVVLKFR VNN+VIAPASTGSDNKSGNAVT  D TKRGDLCIVIPG
Subjt:  MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCTCCCCCTCCAGCGGGATCAGAAAAGGTTGTATTAAAGTTTCGATTGGTTAATAACATGGTAATAGCCCCTGCCAGTACCGGAAGTGATAATAAAAGTGGGAA
TGCTGTCACTAGAATGGACCAGACAAAGAGGGGTGATCTATGCATAGTCATTCCAGGTTTATGCCATCCTTCTTTTCTTTTAGGATCGACCTCATGGCAGCAAGAAAAAG
GCGATCTTGTGCTATACTCCGGTGATCTCTTTCCTACCGAGGCACGCAAACTCCCATCGTGTCCCAAATCATATTCCGTGAATCGAAAGGGGAAGCTTACTCATCCATCA
GCTCATTCACCTATCGGTGCAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCTCCCCCTCCAGCGGGATCAGAAAAGGTTGTATTAAAGTTTCGATTGGTTAATAACATGGTAATAGCCCCTGCCAGTACCGGAAGTGATAATAAAAGTGGGAA
TGCTGTCACTAGAATGGACCAGACAAAGAGGGGTGATCTATGCATAGTCATTCCAGGTTTATGCCATCCTTCTTTTCTTTTAGGATCGACCTCATGGCAGCAAGAAAAAG
GCGATCTTGTGCTATACTCCGGTGATCTCTTTCCTACCGAGGCACGCAAACTCCCATCGTGTCCCAAATCATATTCCGTGAATCGAAAGGGGAAGCTTACTCATCCATCA
GCTCATTCACCTATCGGTGCAGTTTGA
Protein sequenceShow/hide protein sequence
MGSPPPAGSEKVVLKFRLVNNMVIAPASTGSDNKSGNAVTRMDQTKRGDLCIVIPGLCHPSFLLGSTSWQQEKGDLVLYSGDLFPTEARKLPSCPKSYSVNRKGKLTHPS
AHSPIGAV