CuGenDBv2

Gene ID	CmoCh12G007690
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic
Genome location	Cmo_Chr12:6162930..6169578
RNA-Seq Expression	CmoCh12G007690
Synteny	CmoCh12G007690
Gene Ontology terms	GO:0110165 - cellular anatomical structure (cellular component)
InterPro domains	IPR001750 - NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit IPR002128 - NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QIT04096.1 NADH dehydrogenase subunit F [Luffa aegyptiaca]

4.4e-37

41.03

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVN  F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L I                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
        N      L+T+N
Subjt:  NKQTLSLLITIN

QKX48522.1 NADH-plastoquinone oxidoreductase subunit 5 [Luffa acutangula]

4.4e-37

41.03

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVN  F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L I                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
        N      L+T+N
Subjt:  NKQTLSLLITIN

YP_009738250.1 NADH dehydrogenase subunit 5 [Siraitia siamensis]

4.4e-37

41.03

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Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVNF F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L I                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
           +   L+T+N
Subjt:  NKQTLSLLITIN

YP_009752047.1 NADH dehydrogenase subunit F [Cionosicys macranthus]

4.4e-37

41.53

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVN  F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L I                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS---I
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +    KNSL+SISLWGKEGS    
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS---I

Query:  KNKQTLSLLITIN
        KN + LSLL   N
Subjt:  KNKQTLSLLITIN

YP_009753931.1 NADH dehydrogenase subunit F [Trichosanthes lobata]

7.6e-37

40.71

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Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVN  F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L +                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
        N  +   L+T+N
Subjt:  NKQTLSLLITIN

TrEMBL top hits

e value

%identity

Alignment

A0A6C0UCC8 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

2.2e-37

41.03

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVNF F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L I                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
           +   L+T+N
Subjt:  NKQTLSLLITIN

A0A6H0ERV9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

2.2e-37

41.03

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVN  F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L I                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
        N      L+T+N
Subjt:  NKQTLSLLITIN

A0A6H0ESJ2 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

2.2e-37

41.53

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVN  F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L I                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS---I
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +    KNSL+SISLWGKEGS    
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS---I

Query:  KNKQTLSLLITIN
        KN + LSLL   N
Subjt:  KNKQTLSLLITIN

A0A6H0EWF8 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

3.7e-37

40.71

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVN  F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L +                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
        N  +   L+T+N
Subjt:  NKQTLSLLITIN

A0A7D4XNN8 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

2.2e-37

41.03

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNNEVN  F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L I                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK
          VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+ FK +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWK---KNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
        N      L+T+N
Subjt:  NKQTLSLLITIN

SwissProt top hits

e value

%identity

Alignment

B1NWJ6 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

3.0e-36

37.5

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LIYNN+VNF F+TL AVL  S A+AKSAQFPL++WLPDAME                              +IP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        +IMNLI      +       + +++D ++   +S  +Q   ++  L +                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKEGSIKNK
          +P          LSLCGIPP ACFWSKD ILNDSWLYSPIFAII C TA LT FY+F +YLLTF+GHFN     +   K +S +SISLWGKEGS    
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKEGSIKNK

Query:  QTLSL--LITIN
        + L L  L+T+N
Subjt:  QTLSL--LITIN

Q2QD43 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

9.3e-38

39.1

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LI NNEVNF FLTL AVL  + AVAKSAQFPL++WLPDAME                               IP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMNLI      + ++    + +++D ++   +S  +Q   ++  L +                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKEGS--IK
          VP          LSLCG+PPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTF+GH N+    +     NSL+SISLWGKEGS  IK
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKEGS--IK

Query:  NKQTLSLLITIN
               L+T+N
Subjt:  NKQTLSLLITIN

Q49KV1 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

1.6e-37

38.46

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREF-CISGLIYNNEVNFFFLTL-YAVLPISAVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F  ++ LIYNNEV F FLTL Y +L   AVAKSAQFPL++WLPDAME                              +IP
Subjt:  ILLGCIIVAWDLRSLLDKREF-CISGLIYNNEVNFFFLTL-YAVLPISAVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        YIMN I+     + +     + +++D ++   +S  +Q   ++  L +                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  -----------VPFLSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKE--GSIK
                   V  LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGHFN+    +   K +S +SISLWGKE   +IK
Subjt:  -----------VPFLSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKE--GSIK

Query:  NKQTLSLLITIN
        N   L  L+T+N
Subjt:  NKQTLSLLITIN

Q68RV9 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

7.9e-37

39.16

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG +   W   S   +  F I S LIYNNEVNF F+TL AVL  + AVAKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------
        +IMNLI+     + +     + +++D ++   +S  +Q   ++  L +                K  ++L  G                           
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG---------------------------

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWKKNSLWSISLWGKEGS--IKNKQ
          VP          LSLCGIPPLACFWSKD I+ND+WLYSPIFAII  STA LT FY+F IYLLTFEGH N+ F+ +K    +SISLWGKEGS  I    
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI-FKWWKKNSLWSISLWGKEGS--IKNKQ

Query:  TLSLLITIN
         L  L+T+N
Subjt:  TLSLLITIN

Q9TL56 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

5.1e-36

38.73

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Query:  LSILLGCIIVAWDLRSLLDKREF-CISGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------V
        L +LLG +   W   S   +  F  ++ LIYNNEVN  FLT+ AVL  + AVAKSAQFPL++WLPDAME                              V
Subjt:  LSILLGCIIVAWDLRSLLDKREF-CISGLIYNNEVNFFFLTLYAVLPIS-AVAKSAQFPLNLWLPDAME------------------------------V

Query:  IPYIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG-------------------------
        IPYI+NLI+     + +     + +++D ++   +S  +Q   ++  L +                K  ++L  G                         
Subjt:  IPYIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------KVRIWLLCG-------------------------

Query:  ----VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKEG---
            VP          LSLCGIPPLACFWSKD ILNDSWLYSPIFAII CSTA LT FY+F IYLLTFEGH N+    +   K  S +SISLWGK G   
Subjt:  ----VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKEG---

Query:  SIKNKQTLSLLITIN
          KN   L+LL T N
Subjt:  SIKNKQTLSLLITIN

Arabidopsis top hits

e value

%identity

Alignment

ATCG01010.1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein

1.1e-30

35.58

Show/hide

Query:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYA-VLPISAVAKSAQFPLNLWLPDAME------------------------------VIP
        +LLG + + W   S   +  F I + LI NN VN  FLTL A +L +  +AKSAQFPL++WLPDAME                              VIP
Subjt:  ILLGCIIVAWDLRSLLDKREFCI-SGLIYNNEVNFFFLTLYA-VLPISAVAKSAQFPLNLWLPDAME------------------------------VIP

Query:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------------------------------KVRIWLLCG---
         IM +I+     + +     + +++D ++   +S  +Q   ++  L +                                        K +  +L G   
Subjt:  YIMNLITSKDNNSTIWSYFSSCSKRDSEKIWVHSLFTQWNRLLDILQI----------------------------------------KVRIWLLCG---

Query:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKEGSIKNK
          VP          LSLCGIPPLACFWSKD ILNDS L+SPIFAII CSTA LT FY+F IYLLTFEGH N     +   K  S +S+SLWGKE   K  
Subjt:  --VPF---------LSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNI----FKWWKKNSLWSISLWGKEGSIKNK

Query:  QTLSL--LITIN
        +   L  L+T+N
Subjt:  QTLSL--LITIN

Sequences

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CDS sequence

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ATGGAGAAAGAAACCCTGATAAGCGCCTACAATGCTGGAATTTGCAAAGCTAGAGACAGAAAGTTGAAGTCTTTTTACAAGGAAACTGCTTACCACATTTGTGCAACTTC
CACTATCATCAATCAGCAAGCTGCATGGGTTTGCTTTGATCAAACATCTTGTGTGGAACAAATATGGAATTACCTTCTTCAACATACTCATCATCATATGCGGCGATTTC
TTCCACAAGCTGTGAATCATGATCCTCACATTCATCATCTGAATCAGGTGTTGCAATCAAACACATGCTCTATCTTTCTTTCCCACTGCAAGTATGCCTCAGAATCTGCC
GTTCCACAAAAGGGCGGGATTTTGAGTTTAACTCCCCCATCTCTATCTTCATGTACTCTTTCCATCCTTCTAGGTTGCATAATAGTTGCATGGGATCTGAGGTCTTTATT
GGACAAGAGGGAGTTTTGCATTTCGGGATTGATTTATAATAATGAGGTGAATTTCTTCTTTCTGACTTTGTACGCCGTCCTTCCTATTAGTGCAGTTGCTAAATCTGCTC
AATTTCCTCTGAATCTATGGTTACCTGATGCTATGGAGGTAATACCTTACATCATGAATCTAATAACTAGTAAGGATAATAACAGTACTATTTGGAGCTACTTTAGCTCT
TGCTCAAAAAGAGATTCAGAGAAGATCTGGGTCCATTCATTATTCACTCAATGGAATCGGTTGTTGGATATTCTCCAGATAAAAGTCAGAATATGGCTCTTATGCGGGGT
ACCCTTTCTCTCTCTTTGTGGTATTCCACCCCTTGCCTGCTTTTGGTCCAAAGATGCCATTCTTAATGATAGTTGGTTGTATTCACCTATTTTCGCAATAATAACCTGTT
CCACAGCAAGATTAACACCATTTTATATCTTTCCTATCTACTTACTAACTTTTGAGGGACATTTCAACATTTTCAAATGGTGGAAAAAGAATTCCCTCTGGTCAATATCA
TTATGGGGTAAAGAAGGATCAATAAAGAATAAACAAACACTTTCCCTTCTTATCACTATTAACTAA

mRNA sequence

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Protein sequence

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MEKETLISAYNAGICKARDRKLKSFYKETAYHICATSTIINQQAAWVCFDQTSCVEQIWNYLLQHTHHHMRRFLPQAVNHDPHIHHLNQVLQSNTCSIFLSHCKYASESA
VPQKGGILSLTPPSLSSCTLSILLGCIIVAWDLRSLLDKREFCISGLIYNNEVNFFFLTLYAVLPISAVAKSAQFPLNLWLPDAMEVIPYIMNLITSKDNNSTIWSYFSS
CSKRDSEKIWVHSLFTQWNRLLDILQIKVRIWLLCGVPFLSLCGIPPLACFWSKDAILNDSWLYSPIFAIITCSTARLTPFYIFPIYLLTFEGHFNIFKWWKKNSLWSIS
LWGKEGSIKNKQTLSLLITIN

CmoCh12G007690 (gene) of Cucurbita moschata (Rifu) v1 genome