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CmoCh12G007750 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G007750
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 3
Genome locationCmo_Chr12:6188100..6188456
RNA-Seq ExpressionCmoCh12G007750
SyntenyCmoCh12G007750
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR000440 - NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
IPR038430 - NADH:ubiquinone oxidoreductase, subunit 3 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEN56123.1 NADH dehydrogenase subunit 3 [Cucumis melo subsp. melo]3.9e-4888.14Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL FPFASNS+TY EKLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

XP_023545342.1 uncharacterized protein LOC111804780 [Cucurbita pepo subsp. pepo]2.5e-5090.68Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKIDLFGSWSMMAFLF
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGALDRE
Subjt:  ILTIGFLYEWKRGALDRE

YP_004849330.1 NADH dehydrogenase subunit 3 [Cucumis sativus]3.9e-4888.14Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL FPF+SNSSTY EKLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

YP_009565394.1 NADH dehydrogenase subunit 3 [Morus notabilis]7.4e-4786.44Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL FPFASNSSTY +KLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKID FGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIG LYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

YP_009913613.1 NADH dehydrogenase subunit 3 [Luffa acutangula]3.9e-4888.14Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLG+ FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

TrEMBL top hitse value%identityAlignment
A0A3Q9CSW0 NADH-ubiquinone oxidoreductase chain 31.9e-4888.14Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL FPFASNS+TY EKLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

A0A411GRU8 NADH-ubiquinone oxidoreductase chain 33.6e-4786.44Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL FPFASNSSTY +KLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKID FGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIG LYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

A0A7D5XZ34 NADH-ubiquinone oxidoreductase chain 31.9e-4888.14Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLG+ FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

G3EIY2 NADH-ubiquinone oxidoreductase chain 31.9e-4888.14Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL FPF+SNSSTY EKLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

G3EU38 NADH-ubiquinone oxidoreductase chain 31.9e-4888.14Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL FPFASNS+TY EKLSAYECGFDPSGDA+SRFDIRFYLVSILFIILDPE       AVPLNKIDLFGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

SwissProt top hitse value%identityAlignment
O99869 NADH-ubiquinone oxidoreductase chain 32.7e-4481.36Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLGL F F+SNSSTY EK SAYECG DPSGDA+SR DIRFYLVSILFII DPE       AVP NKID FGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIG LYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

P27062 NADH-ubiquinone oxidoreductase chain 39.1e-4883.9Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LVSLIPLG+ FPFASNSSTY +KLSAYECGFDPSGDA+SRFDIRFYLVSILFII DPE       AVP NKID FGSWSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPE-------AVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIG LYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

P60159 NADH-ubiquinone oxidoreductase chain 31.6e-4481.36Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF
        M EFAPICIYLVIS LVSLI LG+ F FASNSSTY EKLSAYECGFDP GDA+SRFDIRFYLVSILFII D       P AV LNKIDLFG WSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGALD E
Subjt:  ILTIGFLYEWKRGALDRE

P60160 NADH-ubiquinone oxidoreductase chain 31.6e-4481.36Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF
        M EFAPICIYLVIS LVSLI LG+ F FASNSSTY EKLSAYECGFDP GDA+SRFDIRFYLVSILFII D       P AV LNKIDLFG WSMMAFL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGALD E
Subjt:  ILTIGFLYEWKRGALDRE

Q36664 NADH-ubiquinone oxidoreductase chain 31.6e-4479.66Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF
        MSEFAPICIYLVIS LV LIPLG+ F FASN STY EKLSAYECGFDP GDA+SRFDIRFYLVSILFII D       P AV LNKIDLFG WSMM FL 
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWK+GALD E
Subjt:  ILTIGFLYEWKRGALDRE

Arabidopsis top hitse value%identityAlignment
AT2G07751.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein1.6e-4783.05Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF
        MSEFAPI IYLVIS LVSLI LG+ FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRFYLVSILF+I D       P AVP NKIDLFG WSMMAFLF
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE

ATCG00440.1 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein3.5e-1038.1Show/hide
Query:  VISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPEAVPL----NKIDLFG-SWSMMAFLF--ILTIGFLYEWK
        V++FL+S    G+  P         EKLS+YE G +P GDA  +F IR+Y+ +++F++ D E V L       D+ G S  + AF+F  IL +G +Y W+
Subjt:  VISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPEAVPL----NKIDLFG-SWSMMAFLF--ILTIGFLYEWK

Query:  RGALD
        +GAL+
Subjt:  RGALD

ATMG00990.1 NADH dehydrogenase 31.6e-4783.05Show/hide
Query:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF
        MSEFAPI IYLVIS LVSLI LG+ FPFASNSSTY EKLSAYECGFDPSGDA+SRFDIRFYLVSILF+I D       P AVP NKIDLFG WSMMAFLF
Subjt:  MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILD-------PEAVPLNKIDLFGSWSMMAFLF

Query:  ILTIGFLYEWKRGALDRE
        ILTIGFLYEWKRGA DRE
Subjt:  ILTIGFLYEWKRGALDRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTTTTCTAGTTTCTTTGATCCCACTCGGTCTTCATTTTCCATTTGCTTCTAATAGTTCAACCTATCTAGA
AAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAAAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAG
CAGTACCTCTCAACAAGATTGATCTGTTTGGATCTTGGTCCATGATGGCCTTTTTATTTATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTTGGATCGG
GAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTTTTCTAGTTTCTTTGATCCCACTCGGTCTTCATTTTCCATTTGCTTCTAATAGTTCAACCTATCTAGA
AAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAAAAGTCGTTTCGATATACGATTTTATCTTGTTTCCATTTTATTTATTATCCTTGATCCGGAAG
CAGTACCTCTCAACAAGATTGATCTGTTTGGATCTTGGTCCATGATGGCCTTTTTATTTATTTTGACGATTGGATTTCTCTATGAATGGAAAAGGGGTGCTTTGGATCGG
GAGTAA
Protein sequenceShow/hide protein sequence
MSEFAPICIYLVISFLVSLIPLGLHFPFASNSSTYLEKLSAYECGFDPSGDAKSRFDIRFYLVSILFIILDPEAVPLNKIDLFGSWSMMAFLFILTIGFLYEWKRGALDR
E