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CmoCh12G007800 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G007800
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:6312482..6313611
RNA-Seq ExpressionCmoCh12G007800
SyntenyCmoCh12G007800
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEV19509.1 hypothetical protein [Tanacetum cinerariifolium]4.3e-0879.07Show/hide
Query:  FGYASTKSPLTTNQRTSSGWVL-AGINNKKTSKWKQQLTMALG
        FGYA TKSPLTTNQ+TSSGWVL      KKT+KWKQQLTMALG
Subjt:  FGYASTKSPLTTNQRTSSGWVL-AGINNKKTSKWKQQLTMALG
KAF5938786.1 hypothetical protein HYC85_023045 [Camellia sinensis]4.5e-0586.21Show/hide
Query:  LRKLQYDPPLGWEASTSSRSQGEVHHDGG
        L+KL++DPP GWEASTSSRSQGEVHHDGG
Subjt:  LRKLQYDPPLGWEASTSSRSQGEVHHDGG
KAF9660753.1 hypothetical protein SADUNF_SadunfMtG0006200 [Salix dunnii]8.4e-2082.26Show/hide
Query:  QQRTRQEASVPLFASSPPSTKVGGYLRKLQYDPPLGWEASTSSRSQGEVHHDGGLSSAFSFR
        +QRTRQ+ASVPLFASSPPST+VGGYLRKL++DPP GWEA TSSRSQGEVHHDGG+ S F FR
Subjt:  QQRTRQEASVPLFASSPPSTKVGGYLRKLQYDPPLGWEASTSSRSQGEVHHDGGLSSAFSFR
KUM50489.1 hypothetical protein ABT39_MTgene332 [Picea glauca]2.4e-0656.52Show/hide
Query:  LTSDPS---SQQRTRQEASVPLFASSPPST------KVGGYLRKLQYDPPLGWEASTSSRSQGEVHHDG
        L SDP+   SQ    + ASVPLFASSPPST       VG +L +       GWEA TSSRSQGEVHHDG
Subjt:  LTSDPS---SQQRTRQEASVPLFASSPPST------KVGGYLRKLQYDPPLGWEASTSSRSQGEVHHDG
KVH96017.1 hypothetical protein Ccrd_001900, partial [Cynara cardunculus var. scolymus]3.8e-0450Show/hide
Query:  TKSPLTTNQRTSSGWVLAGINNKKTSKWKQQLTMA--------LGPDN---LTSDPSSQQRTRQEASVPLFASSPPST
        TKSPLTTN + SSGWVL+G + +  +  +   + A          P     L SDPSSQ  TRQ+ASVPLFASS PST
Subjt:  TKSPLTTNQRTSSGWVLAGINNKKTSKWKQQLTMA--------LGPDN---LTSDPSSQQRTRQEASVPLFASSPPST
TrEMBL top hitse value%identityAlignment
A0A101M3X5 Uncharacterized protein1.2e-0656.52Show/hide
Query:  LTSDPS---SQQRTRQEASVPLFASSPPST------KVGGYLRKLQYDPPLGWEASTSSRSQGEVHHDG
        L SDP+   SQ    + ASVPLFASSPPST       VG +L +       GWEA TSSRSQGEVHHDG
Subjt:  LTSDPS---SQQRTRQEASVPLFASSPPST------KVGGYLRKLQYDPPLGWEASTSSRSQGEVHHDG
A0A103XSD3 Uncharacterized protein (Fragment)1.8e-0450Show/hide
Query:  TKSPLTTNQRTSSGWVLAGINNKKTSKWKQQLTMA--------LGPDN---LTSDPSSQQRTRQEASVPLFASSPPST
        TKSPLTTN + SSGWVL+G + +  +  +   + A          P     L SDPSSQ  TRQ+ASVPLFASS PST
Subjt:  TKSPLTTNQRTSSGWVLAGINNKKTSKWKQQLTMA--------LGPDN---LTSDPSSQQRTRQEASVPLFASSPPST
A0A7J7GHC6 Uncharacterized protein2.2e-0586.21Show/hide
Query:  LRKLQYDPPLGWEASTSSRSQGEVHHDGG
        L+KL++DPP GWEASTSSRSQGEVHHDGG
Subjt:  LRKLQYDPPLGWEASTSSRSQGEVHHDGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G07599.1 unknown protein8.2e-0583.33Show/hide
Query:  FGYASTKSPLTTNQRTSSGWVLAG
        F YA TKSPLTTNQ+TSSGWVL G
Subjt:  FGYASTKSPLTTNQRTSSGWVLAG
AT2G07599.2 unknown protein8.2e-0583.33Show/hide
Query:  FGYASTKSPLTTNQRTSSGWVLAG
        F YA TKSPLTTNQ+TSSGWVL G
Subjt:  FGYASTKSPLTTNQRTSSGWVLAG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCCTTCCCCGCTGCTAAGGGAGAGCAAGAAAATCAGGAAGAAAAATGTAATCAGCGCCCCCTTTCTTTTGGGTATGCAAGTACTAAGAGTCCTCTCACTACCAA
CCAGCGGACATCATCTGGCTGGGTCTTGGCCGGTATCAACAACAAGAAAACAAGCAAATGGAAACAGCAACTAACTATGGCTCTTGGCCCAGACAACCTGACGAGCGATC
CCAGTTCGCAGCAGAGAACTAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGAAAGTCGGTGGCTACCTAAGGAAACTCCAATATGATCCGCCC
CTCGGCTGGGAGGCATCTACCTCATCCCGATCACAAGGAGAGGTTCACCATGATGGGGGGCTAAGTAGCGCCTTTTCCTTTAGGTCCTTAGTAGCATTGACAAAGAAGAA
GGGTGAAAAGACAGCGAATCTTTTCCTCTTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCCTTCCCCGCTGCTAAGGGAGAGCAAGAAAATCAGGAAGAAAAATGTAATCAGCGCCCCCTTTCTTTTGGGTATGCAAGTACTAAGAGTCCTCTCACTACCAA
CCAGCGGACATCATCTGGCTGGGTCTTGGCCGGTATCAACAACAAGAAAACAAGCAAATGGAAACAGCAACTAACTATGGCTCTTGGCCCAGACAACCTGACGAGCGATC
CCAGTTCGCAGCAGAGAACTAGACAGGAAGCGAGCGTACCTTTGTTCGCTTCTTCTCCACCAAGCACGAAAGTCGGTGGCTACCTAAGGAAACTCCAATATGATCCGCCC
CTCGGCTGGGAGGCATCTACCTCATCCCGATCACAAGGAGAGGTTCACCATGATGGGGGGCTAAGTAGCGCCTTTTCCTTTAGGTCCTTAGTAGCATTGACAAAGAAGAA
GGGTGAAAAGACAGCGAATCTTTTCCTCTTGATCTGA
Protein sequenceShow/hide protein sequence
MDSFPAAKGEQENQEEKCNQRPLSFGYASTKSPLTTNQRTSSGWVLAGINNKKTSKWKQQLTMALGPDNLTSDPSSQQRTRQEASVPLFASSPPSTKVGGYLRKLQYDPP
LGWEASTSSRSQGEVHHDGGLSSAFSFRSLVALTKKKGEKTANLFLLI