; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G007880 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G007880
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibosomal protein L2
Genome locationCmo_Chr12:6613163..6617250
RNA-Seq ExpressionCmoCh12G007880
SyntenyCmoCh12G007880
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR012340 - Nucleic acid-binding, OB-fold
IPR022666 - Ribosomal Proteins L2, RNA binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8370023.1 hypothetical protein HHK36_031946 [Tetracentron sinense]6.0e-5951.48Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFR---QRKCKTIEEFAPPRKI
        MRQ QEGRALRQFTLS GKSAGRNSSGRITVFHR GGGSKRLQRRIDLKRSTSS+GIVERIEYDPNRSSRI PVRWIEG +   QRKC TIEEFAPPRKI
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFR---QRKCKTIEEFAPPRKI

Query:  LEPTTTTIRSLFSLSSTPG----------------------------------------------------------------------------VLGGK
        LEPTTTTIR LFS SS PG                                                                            V G K
Subjt:  LEPTTTTIRSLFSLSSTPG----------------------------------------------------------------------------VLGGK

Query:  ------------------------RLTGLLEVLSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAPVGRATVVAKERGQAVTIERLSLSIPSHTGR
                                R    L ++     N+ + +T    LPAKPIGEGPKDG CKV+RAPV        +RGQAVTIERLSLSIPSHTGR
Subjt:  ------------------------RLTGLLEVLSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAPVGRATVVAKERGQAVTIERLSLSIPSHTGR

Query:  EVKWQ
        EVKWQ
Subjt:  EVKWQ

KAF8407371.1 hypothetical protein HHK36_006500 [Tetracentron sinense]6.4e-8558.97Show/hide
Query:  MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEF
        MI   TMRQ QEGRALRQFTLSTGKSAGRNSSGRITVFHR GGGSKRLQRRIDLKRSTSS+GIVERIEYDPNRSSRI PVRWIEG    RQRKC TIEEF
Subjt:  MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEF

Query:  APPRKILEPTTTTIRSLFSLSSTPGVLGGKRLT------------------------------------------GLLEVLSITNRNQRRIQTRLPAKPI
        APPRKILEPTTTTIR LFS SS PG +  +++                                           GL+          +  Q  LPAKPI
Subjt:  APPRKILEPTTTTIRSLFSLSSTPGVLGGKRLT------------------------------------------GLLEVLSITNRNQRRIQTRLPAKPI

Query:  GEGPKDGVCKVNRAPVGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEALVEREGLPGRMPMGAGFFEK
        GEGPKDG CKV+RAPV    V  K +G+A+         P  + R +   +                  LIGERGNAHEA  EREGLPGRMPMGAGFFEK
Subjt:  GEGPKDGVCKVNRAPVGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEALVEREGLPGRMPMGAGFFEK

Query:  ARADSETWDLGLATNEGELKELSPPVAYV
        ARADSETWDLGLATNEG+L+ELSPP AYV
Subjt:  ARADSETWDLGLATNEGELKELSPPVAYV

OVA06704.1 Ribosomal protein L2 [Macleaya cordata]3.3e-6544.47Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEG---FRQRKCKTIEEFAPPRKI
        MRQS +GRALRQFTLSTGKSA RNSSGRITVFHR GGGSKRLQRRIDLKRSTSSM IVERIEYDPN SSRI  VRWIEG    RQRKC TIEEFAP  KI
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEG---FRQRKCKTIEEFAPPRKI

Query:  LEPTTTTIRSLFSLSSTPG---------------------------------------------------------------------------------
        LEPTT TIRSLFS SS PG                                                                                 
Subjt:  LEPTTTTIRSLFSLSSTPG---------------------------------------------------------------------------------

Query:  ----------VLGGKRLTGLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAPVGRATV
                   L GK    L EV                                 +     N+ + +T    LPAKPIGEGPKDG CKV+RAPV  A  
Subjt:  ----------VLGGKRLTGLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAPVGRATV

Query:  VAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEAL----VEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG
                   +R+ +S P+         E  +    L E+ +    Y+   +G  H  +     EREGLPGRMPMGAGFFEKARADSETWDLGLATNEG
Subjt:  VAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEAL----VEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG

Query:  ELKELSPPVAYVVVGRQKARKASLP
        +L+ELSPP AYVVVG+ K  K   P
Subjt:  ELKELSPPVAYVVVGRQKARKASLP

XP_023521202.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp. pepo]2.1e-8349.76Show/hide
Query:  MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPP
        MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHR GGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRI PVRWIEG RQRKCKTIEEFAPP
Subjt:  MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPP

Query:  RKILEPTTTTIRSLFSLSSTPGVLGGKRLT----------------------------------------------------------------------
        RKILEPTTTTI  LFS SSTPG +  +++                                                                       
Subjt:  RKILEPTTTTIRSLFSLSSTPGVLGGKRLT----------------------------------------------------------------------

Query:  ------------------------GLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAP
                                 L EV                                 +     N+ + +T    LPAKPIGEGPKDG CKVN   
Subjt:  ------------------------GLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAP

Query:  VGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATN
             +  +ER       R     P  + R +               +     YLIGERGNAHEA  EREGLPGRMPMGAGFFEKARADSETWDLGLATN
Subjt:  VGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATN

Query:  EGELKELSPPVAYVVVGRQKAR
        EGELKELSPPVAYVVVGRQKAR
Subjt:  EGELKELSPPVAYVVVGRQKAR

XP_042504770.1 LOW QUALITY PROTEIN: 60S ribosomal protein L2, mitochondrial [Macadamia integrifolia]1.8e-6646.02Show/hide
Query:  MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEF
        MI   TMRQS +GRALRQFT  TGKSAGRNSSGRITVFHR GGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRI PVRWIEG    RQRKC TIEEF
Subjt:  MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEF

Query:  APPRKILEPTTTTIRSLFSLSSTPG-------------------VLG-----------------------------------------------------
        APPRKILEPTTTTIR LFS SS PG                   V+G                                                     
Subjt:  APPRKILEPTTTTIRSLFSLSSTPG-------------------VLG-----------------------------------------------------

Query:  -------------------GKRLTGLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAP
                           GK    L EV                                 +     N+ + +T    LPAKPIGEGPKDG CKV+   
Subjt:  -------------------GKRLTGLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAP

Query:  VGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATN
             +  +ER       R     P  + R +                +H   +LIGERGNAHEA  EREGLPGRMPMGAGFFEKARADSETWDLGLATN
Subjt:  VGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATN

Query:  EG
        EG
Subjt:  EG

TrEMBL top hitse value%identityAlignment
A0A200Q8E8 Ribosomal protein L21.6e-6544.47Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEG---FRQRKCKTIEEFAPPRKI
        MRQS +GRALRQFTLSTGKSA RNSSGRITVFHR GGGSKRLQRRIDLKRSTSSM IVERIEYDPN SSRI  VRWIEG    RQRKC TIEEFAP  KI
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEG---FRQRKCKTIEEFAPPRKI

Query:  LEPTTTTIRSLFSLSSTPG---------------------------------------------------------------------------------
        LEPTT TIRSLFS SS PG                                                                                 
Subjt:  LEPTTTTIRSLFSLSSTPG---------------------------------------------------------------------------------

Query:  ----------VLGGKRLTGLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAPVGRATV
                   L GK    L EV                                 +     N+ + +T    LPAKPIGEGPKDG CKV+RAPV  A  
Subjt:  ----------VLGGKRLTGLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGEGPKDGVCKVNRAPVGRATV

Query:  VAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEAL----VEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG
                   +R+ +S P+         E  +    L E+ +    Y+   +G  H  +     EREGLPGRMPMGAGFFEKARADSETWDLGLATNEG
Subjt:  VAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLIGERGNAHEAL----VEREGLPGRMPMGAGFFEKARADSETWDLGLATNEG

Query:  ELKELSPPVAYVVVGRQKARKASLP
        +L+ELSPP AYVVVG+ K  K   P
Subjt:  ELKELSPPVAYVVVGRQKARKASLP

A0A3P6HGQ8 Ribosomal_L2 domain-containing protein3.5e-5241.29Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS
        RALRQFTLSTGKSAGRNSSGRITVFHR GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+I PVRWI+G  Q+K  TIEE APPRKILEPTT TI  
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS

Query:  LFSLSSTPG-------------------VLG---------------------------------------------------------------------
        LFS S  PG                   V+G                                                                     
Subjt:  LFSLSSTPG-------------------VLG---------------------------------------------------------------------

Query:  --------GKRLTGLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGE-----------GPKDGVCKVNRAP
                GK    L EV                                 +     N+ + +T    LPAKPIGE             KDG CKV+   
Subjt:  --------GKRLTGLLEV---------------------------------LSITNRNQRRIQT---RLPAKPIGE-----------GPKDGVCKVNRAP

Query:  VGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNI-YLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLAT
             +  +ER     I       P  + R +                +H  I YLIGERGN HEA  EREGLPGRMPMGAGFFEKARADSETWDLGLAT
Subjt:  VGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNI-YLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLAT

Query:  NE
        NE
Subjt:  NE

A0A654GF58 Ribosomal_L2 domain-containing protein5.3e-5342.2Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS
        RALRQFTLSTGKSAGRNSSGRITVFHR GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+I PVRWI+G  Q+K  TIE+FAPPRKILEPTT TI  
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS

Query:  LFSLSSTPGVLGGKRL-----------------TGLLEVLS------------------------ITNRNQRRIQTRLP--------------AKPIGEG
        LFS S  PG +  +++                 TG+  + S                         ++   +R    L               AKP    
Subjt:  LFSLSSTPGVLGGKRL-----------------TGLLEVLS------------------------ITNRNQRRIQTRLP--------------AKPIGEG

Query:  PK----------DGVCKVNRAPVGRATVVAKERGQA----VTIERLS----LSIPSHTGREVKWQEGHTPVWLLAEYS----------------------
        P+            +C+V +          + +G+A     +  R      +    H   + K  +G+ P   + E +                      
Subjt:  PK----------DGVCKVNRAPVGRATVVAKERGQA----VTIERLS----LSIPSHTGREVKWQEGHTPVWLLAEYS----------------------

Query:  ------------------SHPNI-YLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNE
                          +H  I YLIGERGN HEA  EREGLPGRMPMGAGFFEKARADSETWDLGLATNE
Subjt:  ------------------SHPNI-YLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNE

A0A6N2KQX0 Ribosomal_L2 domain-containing protein3.1e-6140.72Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFR---QRKCKTIEEFAPPRKI
        MRQSQEGRALRQFT  TGKSAGRNSSGRITVFHR GGGSKRLQRR+DLKRSTSSMGIVERIEYDPNRSSRI  VRWIEG +   QRKCKTIEEFAPPRKI
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFR---QRKCKTIEEFAPPRKI

Query:  LEPTTTTIRSLFSLSS-------------TPGVLGGKRLTGL----------------------------------------------------------
        LEPTT TIR LFS SS             +PG++    + GL                                                          
Subjt:  LEPTTTTIRSLFSLSS-------------TPGVLGGKRLTGL----------------------------------------------------------

Query:  ---------------------------------------------------------------LEVLSITNRNQRRIQT---RLPAKPIGEGPKDGVCKV
                                                                       L ++  +  N+ + +T    LPAKPIGE PKDG CKV
Subjt:  ---------------------------------------------------------------LEVLSITNRNQRRIQT---RLPAKPIGEGPKDGVCKV

Query:  NRAPV-------------------------------------GRATVV---AKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLI
        +RAPV                                     GR         +RGQAVTIERLSLSIPSHTGREVKWQ GHTP+          + +LI
Subjt:  NRAPV-------------------------------------GRATVV---AKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSHPNIYLI

Query:  GERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELKELSPPVAYVVVGRQKARKAS
        GERGNA EA  EREG PGR                           +L ELSPP AYVVVGR+    AS
Subjt:  GERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELKELSPPVAYVVVGRQKARKAS

F4IMC7 Nucleic acid-binding, OB-fold-like protein5.3e-5342.2Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS
        RALRQFTLSTGKSAGRNSSGRITVFHR GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+I PVRWI+G  Q+K  TIE+FAPPRKILEPTT TI  
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS

Query:  LFSLSSTPGVLGGKRL-----------------TGLLEVLS------------------------ITNRNQRRIQTRLP--------------AKPIGEG
        LFS S  PG +  +++                 TG+  + S                         ++   +R    L               AKP    
Subjt:  LFSLSSTPGVLGGKRL-----------------TGLLEVLS------------------------ITNRNQRRIQTRLP--------------AKPIGEG

Query:  PK----------DGVCKVNRAPVGRATVVAKERGQA----VTIERLS----LSIPSHTGREVKWQEGHTPVWLLAEYS----------------------
        P+            +C+V +          + +G+A     +  R      +    H   + K  +G+ P   + E +                      
Subjt:  PK----------DGVCKVNRAPVGRATVVAKERGQA----VTIERLS----LSIPSHTGREVKWQEGHTPVWLLAEYS----------------------

Query:  ------------------SHPNI-YLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNE
                          +H  I YLIGERGN HEA  EREGLPGRMPMGAGFFEKARADSETWDLGLATNE
Subjt:  ------------------SHPNI-YLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNE

SwissProt top hitse value%identityAlignment
P0C8K6 60S ribosomal protein L2, mitochondrial3.5e-4183.62Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEFAPPRKI
        MRQS +GRALR FTLSTGKSAGRNSSGRITVFHR GGGSKRLQR+IDLKRSTSS+GIVERIEYDPNRSSRI  VRWIEG    RQRK KTIEEFA PRKI
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEFAPPRKI

Query:  LEPTTTTIRSLFSLSS
        LE TT TI  LFS SS
Subjt:  LEPTTTTIRSLFSLSS

P26859 60S ribosomal protein L2, mitochondrial4.7e-2261.26Show/hide
Query:  EGRALRQFTLSTGK-SAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTT
        +G+AL+Q T    + SAGRNSSGRITVFHR GGGSKRLQR+ID KRSTSSMGIVERIEYDPNRSS I  VRWIEG  +   +     A  R+  E     
Subjt:  EGRALRQFTLSTGK-SAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTT

Query:  IRSLFSLSSTP
           LFS SS P
Subjt:  IRSLFSLSSTP

P92812 60S ribosomal protein L2, mitochondrial3.5e-4183.62Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEFAPPRKI
        MRQS +GRALR FTLSTGKSAGRNSSGRITVFHR GGGSKRLQR+IDLKRSTSS+GIVERIEYDPNRSSRI  VRWIEG    RQRK KTIEEFA PRKI
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEFAPPRKI

Query:  LEPTTTTIRSLFSLSS
        LE TT TI  LFS SS
Subjt:  LEPTTTTIRSLFSLSS

P93311 60S ribosomal protein L2, mitochondrial3.5e-4178.45Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS
        RALRQFTLSTGKSAGRNSSGRITVFHR GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+I PVRWI+G  Q+K  TIE+FAPPRKILEPTT TI  
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS

Query:  LFSLSSTPGVLGGKRL
        LFS S  PG +  +++
Subjt:  LFSLSSTPGVLGGKRL

Q2F969 60S ribosomal protein L2, mitochondrial3.5e-4183.62Show/hide
Query:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEFAPPRKI
        MRQS +GRALR FTLSTGKSAGRNSSGRITVFHR GGGSKRLQR+IDLKRSTSS+GIVERIEYDPNRSSRI  VRWIEG    RQRK KTIEEFA PRKI
Subjt:  MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGF---RQRKCKTIEEFAPPRKI

Query:  LEPTTTTIRSLFSLSS
        LE TT TI  LFS SS
Subjt:  LEPTTTTIRSLFSLSS

Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein1.0e-5642.2Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS
        RALRQFTLSTGKSAGRNSSGRITVFHR GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+I PVRWI+G  Q+K  TIE+FAPPRKILEPTT TI  
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS

Query:  LFSLSSTPGVLGGKRL-----------------TGLLEVLS------------------------ITNRNQRRIQTRLP--------------AKPIGEG
        LFS S  PG +  +++                 TG+  + S                         ++   +R    L               AKP    
Subjt:  LFSLSSTPGVLGGKRL-----------------TGLLEVLS------------------------ITNRNQRRIQTRLP--------------AKPIGEG

Query:  PK----------DGVCKVNRAPVGRATVVAKERGQA----VTIERLS----LSIPSHTGREVKWQEGHTPVWLLAEYS----------------------
        P+            +C+V +          + +G+A     +  R      +    H   + K  +G+ P   + E +                      
Subjt:  PK----------DGVCKVNRAPVGRATVVAKERGQA----VTIERLS----LSIPSHTGREVKWQEGHTPVWLLAEYS----------------------

Query:  ------------------SHPNI-YLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNE
                          +H  I YLIGERGN HEA  EREGLPGRMPMGAGFFEKARADSETWDLGLATNE
Subjt:  ------------------SHPNI-YLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNE

ATCG00830.1 ribosomal protein L24.8e-0647.46Show/hide
Query:  GRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRITPVRWIEG
        GRN+ G IT  HR GGG KRL R+ID +R+   + G +  IEYDPNR++ I  + + +G
Subjt:  GRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRITPVRWIEG

ATCG01310.1 ribosomal protein L24.8e-0647.46Show/hide
Query:  GRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRITPVRWIEG
        GRN+ G IT  HR GGG KRL R+ID +R+   + G +  IEYDPNR++ I  + + +G
Subjt:  GRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSM-GIVERIEYDPNRSSRITPVRWIEG

ATMG00560.1 Nucleic acid-binding, OB-fold-like protein2.5e-4278.45Show/hide
Query:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS
        RALRQFTLSTGKSAGRNSSGRITVFHR GGGSKRL RRIDLKRSTSSMGIVE IEYDPNRSS+I PVRWI+G  Q+K  TIE+FAPPRKILEPTT TI  
Subjt:  RALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTTIRS

Query:  LFSLSSTPGVLGGKRL
        LFS S  PG +  +++
Subjt:  LFSLSSTPGVLGGKRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTATGATCTCGACAATGAGACAGAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGAAAGTCTGCTGGTAGGAATTCCTCAGGGCGTATTACGGT
TTTTCACCGAGGGGGTGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTT
CTTCTCGGATCACTCCAGTACGATGGATCGAGGGGTTCCGCCAGAGGAAATGCAAGACGATAGAGGAGTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACC
ATCCGCAGCCTATTTTCGTTATCTTCCACGCCTGGAGTTTTAGGCGGCAAGAGACTGACGGGCTTGTTGGAGGTGCTGAGCATAACGAATCGAAACCAGAGACGGATCCA
GACTAGGTTGCCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAGTGTGCAAAGTCAATCGTGCACCTGTCGGGCGGGCTACCGTGGTAGCAAAAGAGAGAGGCCAGG
CGGTGACAATTGAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGAAGGCCATACGCCCGTTTGGCTCCTCGCGGAGTATAGCTCACAT
CCAAACATCTATCTGATTGGGGAACGGGGCAACGCCCATGAAGCTCTGGTGGAAAGGGAAGGCCTGCCAGGCCGTATGCCCATGGGTGCAGGATTCTTCGAAAAAGCGCG
GGCTGACTCGGAGACTTGGGACCTTGGCTTAGCAACGAATGAAGGGGAGCTCAAAGAGCTTTCTCCCCCAGTGGCTTATGTAGTGGTCGGACGGCAGAAAGCTCGCAAAG
CCTCGCTTCCCTCCCTTCTTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTATGATCTCGACAATGAGACAGAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTTGAGTACAGGAAAGTCTGCTGGTAGGAATTCCTCAGGGCGTATTACGGT
TTTTCACCGAGGGGGTGGTGGATCGAAGCGATTGCAGCGAAGAATTGATCTGAAACGAAGCACTTCGTCTATGGGCATTGTAGAAAGAATAGAATATGACCCTAATCGTT
CTTCTCGGATCACTCCAGTACGATGGATCGAGGGGTTCCGCCAGAGGAAATGCAAGACGATAGAGGAGTTCGCTCCGCCGCGTAAGATCCTCGAACCTACCACGACCACC
ATCCGCAGCCTATTTTCGTTATCTTCCACGCCTGGAGTTTTAGGCGGCAAGAGACTGACGGGCTTGTTGGAGGTGCTGAGCATAACGAATCGAAACCAGAGACGGATCCA
GACTAGGTTGCCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAGTGTGCAAAGTCAATCGTGCACCTGTCGGGCGGGCTACCGTGGTAGCAAAAGAGAGAGGCCAGG
CGGTGACAATTGAGAGGTTGTCACTGAGCATTCCTAGTCACACGGGAAGAGAGGTCAAATGGCAAGAAGGCCATACGCCCGTTTGGCTCCTCGCGGAGTATAGCTCACAT
CCAAACATCTATCTGATTGGGGAACGGGGCAACGCCCATGAAGCTCTGGTGGAAAGGGAAGGCCTGCCAGGCCGTATGCCCATGGGTGCAGGATTCTTCGAAAAAGCGCG
GGCTGACTCGGAGACTTGGGACCTTGGCTTAGCAACGAATGAAGGGGAGCTCAAAGAGCTTTCTCCCCCAGTGGCTTATGTAGTGGTCGGACGGCAGAAAGCTCGCAAAG
CCTCGCTTCCCTCCCTTCTTCAATGA
Protein sequenceShow/hide protein sequence
MIMISTMRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGGSKRLQRRIDLKRSTSSMGIVERIEYDPNRSSRITPVRWIEGFRQRKCKTIEEFAPPRKILEPTTTT
IRSLFSLSSTPGVLGGKRLTGLLEVLSITNRNQRRIQTRLPAKPIGEGPKDGVCKVNRAPVGRATVVAKERGQAVTIERLSLSIPSHTGREVKWQEGHTPVWLLAEYSSH
PNIYLIGERGNAHEALVEREGLPGRMPMGAGFFEKARADSETWDLGLATNEGELKELSPPVAYVVVGRQKARKASLPSLLQ