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CmoCh12G007930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G007930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S7, chloroplastic
Genome locationCmo_Chr12:6638112..6638466
RNA-Seq ExpressionCmoCh12G007930
SyntenyCmoCh12G007930
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000235 - Ribosomal protein S5/S7
IPR023798 - Ribosomal protein S7 domain
IPR036823 - Ribosomal protein S7 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJU03805.1 ribosomal protein S7 [Magnolia kachirachirai]1.4e-2093.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

QUV73719.1 ribosomal protein S7 [Rohdea wattii]1.4e-2093.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

YP_009004087.1 ribosomal protein S7 [Cucumis hystrix]1.4e-2093.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

YP_009767874.1 ribosomal protein S7 [Dermatophyllum secundiflorum]1.4e-2093.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

YP_009913638.1 ribosomal protein S7 [Luffa acutangula]1.4e-2093.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

TrEMBL top hitse value%identityAlignment
A0A0A0L6M3 30S ribosomal protein S7, chloroplastic6.6e-2193.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

A0A218KG96 30S ribosomal protein S7, chloroplastic6.6e-2193.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

A0A343UM92 30S ribosomal protein S7, chloroplastic6.6e-2193.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

A0A6H0E3D0 Ribosomal protein S76.6e-2193.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

A0A6M5EWZ1 30S ribosomal protein S7, chloroplastic6.6e-2193.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

SwissProt top hitse value%identityAlignment
A4QJG0 30S ribosomal protein S7, chloroplastic8.8e-2391.53Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFK SSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

A4QJP4 30S ribosomal protein S7, chloroplastic8.8e-2391.53Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFK SSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

Q4VZK9 30S ribosomal protein S7, chloroplastic1.8e-2393.22Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFKFSSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

Q67ID1 30S ribosomal protein S7, chloroplastic8.8e-2391.53Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFK SSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

Q67IL8 30S ribosomal protein S7, chloroplastic8.8e-2391.53Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFK SSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

Arabidopsis top hitse value%identityAlignment
AT2G07696.1 Ribosomal protein S7p/S5e family protein3.8e-0537.88Show/hide
Query:  RKALAIRWLLGASLKRPGQNMAFKFS------SELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        ++ LAIRW+L A+ KR    ++++ S      +E++DA +  G    K+E  H +A  NR+FAHFR
Subjt:  RKALAIRWLLGASLKRPGQNMAFKFS------SELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

ATCG00900.1 Ribosomal protein S7p/S5e family protein6.3e-2491.53Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFK SSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

ATCG01240.1 ribosomal protein S76.3e-2491.53Show/hide
Query:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        KALAIRWLLGAS KRPG+NMAFK SSELVDAAKGSGD I KKEETHRMAEANRAFAHFR
Subjt:  KALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR

ATMG01270.1 mitochondrial ribosomal protein S73.8e-0537.88Show/hide
Query:  RKALAIRWLLGASLKRPGQNMAFKFS------SELVDAAKGSGDGISKKEETHRMAEANRAFAHFR
        ++ LAIRW+L A+ KR    ++++ S      +E++DA +  G    K+E  H +A  NR+FAHFR
Subjt:  RKALAIRWLLGASLKRPGQNMAFKFS------SELVDAAKGSGDGISKKEETHRMAEANRAFAHFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACGGTTCTGTAGGTAGAGTGGGAGATCTACATAAGGAAAGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCTAAAACGTCCGGGTCAAAATATGGCTTT
CAAATTCAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGGCATAAGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTC
GTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACGGTTCTGTAGGTAGAGTGGGAGATCTACATAAGGAAAGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCTAAAACGTCCGGGTCAAAATATGGCTTT
CAAATTCAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGGCATAAGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTC
GTTAA
Protein sequenceShow/hide protein sequence
MYGSVGRVGDLHKERKALAIRWLLGASLKRPGQNMAFKFSSELVDAAKGSGDGISKKEETHRMAEANRAFAHFR