; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G008110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G008110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L34-like
Genome locationCmo_Chr12:7179554..7180917
RNA-Seq ExpressionCmoCh12G008110
SyntenyCmoCh12G008110
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583599.1 Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4098.92Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

PON67321.1 Ribosomal protein [Trema orientale]5.9e-4097.85Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]2.6e-4098.92Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

XP_022938256.1 60S ribosomal protein L34-like [Cucurbita moschata]1.2e-40100Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

XP_022987206.1 60S ribosomal protein L34-like [Cucurbita maxima]2.6e-4098.92Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

TrEMBL top hitse value%identityAlignment
A0A6J1DF78 60S ribosomal protein L341.3e-4098.92Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

A0A6J1FCM4 60S ribosomal protein L34-like5.7e-41100Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

A0A6J1HLN7 60S ribosomal protein L34-like1.3e-4098.92Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

A0A6J1I6I6 60S ribosomal protein L34-like1.3e-4098.92Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

A0A6J1JDI0 60S ribosomal protein L34-like1.3e-4098.92Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKE+LASKS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L341.6e-4092.47Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQK KE+ A+K+
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

P41098 60S ribosomal protein L349.4e-4192.47Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKE+LA+KS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

Q42351 60S ribosomal protein L34-12.7e-4091.4Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKE++A K+
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

Q9FE65 60S ribosomal protein L34-21.4e-3991.3Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASK
        GKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKE++A K
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASK

Q9LJW6 60S ribosomal protein L34-35.2e-3990.32Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKE+ A KS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein1.9e-4191.4Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKE++A K+
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS

AT1G26880.2 Ribosomal protein L34e superfamily protein3.8e-2992.31Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRER +
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

AT1G69620.1 ribosomal protein L349.7e-4191.3Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASK
        GKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKE++A K
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASK

AT3G28900.1 Ribosomal protein L34e superfamily protein3.7e-4090.32Show/hide
Query:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS
        GKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKE+ A KS
Subjt:  GKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTTTTGTTTCAGTCTTACAATTCTCCAGCAACAGGTTTAGAGGATTACGACGAGCGGAGAAGATGGTCCAGCGGCTCACTTACCGTAAACGGCACAGCTATGCC
ACAAAGTCCAACCAGCACCGCGTCGTCAAAACTCCCGGTAATCAGACACTGTTCTTCATCCGTGTCTCGAAGCCTTCTCCGGATTACATCTCTCATCATTCGCTGTGGAA
AGCTTGTGTACCAGACCACGAAGAAGAGGGCTAGTGGTCCTAAATGCCCTGTCACTGGAAAAAGAATTCAAGGAATTCCTCACTTAAGACCTGCTGAATACAAGAGGTCT
AGGCTGGCTAGGAACCGTAGGACTGTCAACCGCGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAAAGGATTATTAGGGCTTTTTTGGTTGAAGAACAAAAGAT
TGTCAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAGGCTTGCCTCCAAGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTTTTGTTTCAGTCTTACAATTCTCCAGCAACAGGTTTAGAGGATTACGACGAGCGGAGAAGATGGTCCAGCGGCTCACTTACCGTAAACGGCACAGCTATGCC
ACAAAGTCCAACCAGCACCGCGTCGTCAAAACTCCCGGTAATCAGACACTGTTCTTCATCCGTGTCTCGAAGCCTTCTCCGGATTACATCTCTCATCATTCGCTGTGGAA
AGCTTGTGTACCAGACCACGAAGAAGAGGGCTAGTGGTCCTAAATGCCCTGTCACTGGAAAAAGAATTCAAGGAATTCCTCACTTAAGACCTGCTGAATACAAGAGGTCT
AGGCTGGCTAGGAACCGTAGGACTGTCAACCGCGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAAAGGATTATTAGGGCTTTTTTGGTTGAAGAACAAAAGAT
TGTCAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAGGCTTGCCTCCAAGAGTTAGAATGGCTGGGTTAAAATCCCAAACCCTTTTCCATTTTATATATGCTGAATGC
AAATTTTGACTTGGATCAATGACTTTTTAATTTAAATGATTTGGAATTAGCGTTGTATTCTTTCAGTTGCATTAGTCGTTCCAAGTTTCTCCTGCAAGAATTAATCAGTT
TATCACTCTTGTTTATGCTGATTATGCTTCATTTACCTGCACGCATCAAGAATATGGTCCTAGTTATGTCCCTTCATTCTCCCTCATCCTTTAGCACG
Protein sequenceShow/hide protein sequence
MVLLFQSYNSPATGLEDYDERRRWSSGSLTVNGTAMPQSPTSTASSKLPVIRHCSSSVSRSLLRITSLIIRCGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRS
RLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKERLASKS