; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G008200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G008200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNDR1/HIN1-like protein 12
Genome locationCmo_Chr12:7392165..7393982
RNA-Seq ExpressionCmoCh12G008200
SyntenyCmoCh12G008200
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586015.1 hypothetical protein SDJN03_18748, partial [Cucurbita argyrosperma subsp. sororia]3.7e-11197.67Show/hide
Query:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQASSSSST V+PPKR SSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELH SANIRYIINGWISK RLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

KAG7037378.1 hypothetical protein SDJN02_01003, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-10796.28Show/hide
Query:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQASSSSST V+PPKR SSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL     YIINGWISKRRLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

XP_022937554.1 uncharacterized protein LOC111443928 [Cucurbita moschata]3.6e-114100Show/hide
Query:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

XP_022969530.1 uncharacterized protein LOC111468519 [Cucurbita maxima]4.3e-10794.88Show/hide
Query:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSST+ QPDQASSSSST VQPPKR SS GQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLH LTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL+LSA IRYIINGW+SK RLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

XP_023537505.1 uncharacterized protein LOC111798522 [Cucurbita pepo subsp. pepo]6.1e-10694.42Show/hide
Query:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQ+SSSSST VQPPKR SS GQHRTTNRTR+LRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYM MTINEMGR FEMV+ NFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL LSANIRYIINGWISKRR MEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

TrEMBL top hitse value%identityAlignment
A0A0A0LSV0 Uncharacterized protein1.3e-4549.28Show/hide
Query:  PDQASSSSSTTVQPPKRESSYG-QHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKA
        P   SSSSS       +E SY  +H T  RTRVLRI GR++LGLM+LV +A++ CWL+V P+ P   +E G V  HSLTDRKLNA+++F + S+NPNKKA
Subjt:  PDQASSSSSTTVQPPKRESSYG-QHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKA

Query:  AIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKINGSTPL
        +I +D M M +++MG  F   + +F+Q P N  VL+ TI  +F+YP   ++E +K +GISPEL  SA + YI+  W S+ RL+E+YC+   LK N ST  
Subjt:  AIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKINGSTPL

Query:  DNIKCNVDL
        DN KC VDL
Subjt:  DNIKCNVDL

A0A6J1FBI3 uncharacterized protein LOC1114439281.7e-114100Show/hide
Query:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

A0A6J1HJ52 uncharacterized protein At1g08160-like1.4e-5855.66Show/hide
Query:  TNQPDQASSSSSTTVQPPKRESSYG-QHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPN
        +N  ++ASSS+++ ++ PK  SSYG QH T  RT+++RIIGRS+L +M LVGLA+V CWLVV PK P   LE G VT HSLTDRKLNAS+SF I+S+NPN
Subjt:  TNQPDQASSSSSTTVQPPKRESSYG-QHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPN

Query:  KKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKINGS
        K+A+IH+D M MT+++MG+ F   +  F+Q PGN   L+PT+ ++F+YP  ++++ +  DG++PELH SA++ YI+  W SKRR +EIYC+R  LKINGS
Subjt:  KKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKINGS

Query:  TPLDNIKCNVDL
        TP DN KC VDL
Subjt:  TPLDNIKCNVDL

A0A6J1I064 uncharacterized protein LOC1114685192.1e-10794.88Show/hide
Query:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSST+ QPDQASSSSST VQPPKR SS GQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLH LTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL+LSA IRYIINGW+SK RLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

A0A6J1I0B9 uncharacterized protein At1g08160-like1.5e-5754.29Show/hide
Query:  NQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKK
        N   +ASSSS++ ++ PK      QH T  RT+++RIIGRS+L +M LVGLA+V CWLVV PK P   LE G VT HSLTDRKLNAS+SF I+S+NPNK+
Subjt:  NQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKK

Query:  AAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKINGSTP
        A+IH+D M MT+++MG+ F   +  F+Q+PGN   L+PT+ ++F+YP  ++++ +  +G++PELH SA++ YI+  W SKRR +EIYC+R  LKINGSTP
Subjt:  AAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKINGSTP

Query:  LDNIKCNVDL
         DN KC VDL
Subjt:  LDNIKCNVDL

SwissProt top hitse value%identityAlignment
Q8VZ13 Uncharacterized protein At1g081604.9e-0526.86Show/hide
Query:  IIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSL--TDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEMGRKFEMVMRN---FSQVPG
        I+   +LGL  LVGLA++  +L + PK+ ++++E   V   ++   D  +NA  S+ I+S+NP K  ++   Y  M I+       +  +N   F Q P 
Subjt:  IIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSL--TDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEMGRKFEMVMRN---FSQVPG

Query:  N-----LIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWI--SKRRLMEIYCNRHMLKINGST
        N       ++S  + +          EK K   I  E++++A + Y    WI  S+RR ++  C   M+ +  S+
Subjt:  N-----LIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWI--SKRRLMEIYCNRHMLKINGST

Arabidopsis top hitse value%identityAlignment
AT1G08160.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family3.5e-0626.86Show/hide
Query:  IIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSL--TDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEMGRKFEMVMRN---FSQVPG
        I+   +LGL  LVGLA++  +L + PK+ ++++E   V   ++   D  +NA  S+ I+S+NP K  ++   Y  M I+       +  +N   F Q P 
Subjt:  IIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSL--TDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEMGRKFEMVMRN---FSQVPG

Query:  N-----LIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWI--SKRRLMEIYCNRHMLKINGST
        N       ++S  + +          EK K   I  E++++A + Y    WI  S+RR ++  C   M+ +  S+
Subjt:  N-----LIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWI--SKRRLMEIYCNRHMLKINGST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCACTACTAACCAACCAGATCAAGCATCATCATCATCATCCACCACTGTCCAGCCACCAAAACGAGAAAGCTCCTATGGGCAGCATAGGACAACAAACCGGAC
AAGGGTATTGAGAATCATAGGAAGAAGCATGTTGGGCTTAATGGTCCTTGTCGGGCTTGCACTAGTTACTTGTTGGCTTGTTGTGACCCCCAAGAAACCAGTTTTCAGCT
TGGAAAGAGGCGTTGTTACACTCCATAGTTTAACCGACAGGAAGCTCAATGCCTCCGTTTCTTTCCACATTAGAAGCTTCAACCCCAACAAGAAAGCCGCCATCCACATT
GATTATATGATGATGACAATCAATGAGATGGGCAGGAAGTTCGAGATGGTCATGCGCAACTTCTCCCAGGTGCCGGGAAACCTAATTGTCTTGTCCCCGACCATCCCTAT
CGACTTCGTATACCCATTGCCTCGGTTGCAAGAGAAGGTGAAGTTTGATGGGATCAGTCCCGAGCTTCACTTGTCGGCAAACATCAGATACATTATTAATGGATGGATAT
CAAAACGTCGATTGATGGAGATCTATTGTAATCGTCACATGCTTAAGATCAATGGTTCGACACCTTTGGATAATATCAAATGCAATGTGGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
GACAGAGACACAACCAAGCCAAAACAAATCCCCTCAACAACATGAGCTCCACTACTAACCAACCAGATCAAGCATCATCATCATCATCCACCACTGTCCAGCCACCAAAA
CGAGAAAGCTCCTATGGGCAGCATAGGACAACAAACCGGACAAGGGTATTGAGAATCATAGGAAGAAGCATGTTGGGCTTAATGGTCCTTGTCGGGCTTGCACTAGTTAC
TTGTTGGCTTGTTGTGACCCCCAAGAAACCAGTTTTCAGCTTGGAAAGAGGCGTTGTTACACTCCATAGTTTAACCGACAGGAAGCTCAATGCCTCCGTTTCTTTCCACA
TTAGAAGCTTCAACCCCAACAAGAAAGCCGCCATCCACATTGATTATATGATGATGACAATCAATGAGATGGGCAGGAAGTTCGAGATGGTCATGCGCAACTTCTCCCAG
GTGCCGGGAAACCTAATTGTCTTGTCCCCGACCATCCCTATCGACTTCGTATACCCATTGCCTCGGTTGCAAGAGAAGGTGAAGTTTGATGGGATCAGTCCCGAGCTTCA
CTTGTCGGCAAACATCAGATACATTATTAATGGATGGATATCAAAACGTCGATTGATGGAGATCTATTGTAATCGTCACATGCTTAAGATCAATGGTTCGACACCTTTGG
ATAATATCAAATGCAATGTGGATCTTTGAGATTTGATCAGGCTACGTGTTATTCTTGTTCACCATGTTCCAACTCAATAATCTAAGATGGTCCCTCAAC
Protein sequenceShow/hide protein sequence
MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHI
DYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIINGWISKRRLMEIYCNRHMLKINGSTPLDNIKCNVDL