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CmoCh12G008260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G008260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCASP-like protein
Genome locationCmo_Chr12:7472709..7476679
RNA-Seq ExpressionCmoCh12G008260
SyntenyCmoCh12G008260
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR045009 - CASP-like protein 5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583581.1 CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5060Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        M+VSHATVHP EDPPTTDG +AP VRMKDMEGMPGTRGGLALRF QF+FAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASREKNHRNDQLTKEKARQCTVDSSS
                      ITSTLTFAAAC+SAGIT+LIDND+ SC ENHCVQFE ATAMAFISWF ALPSFFMNFW     EKNH+NDQLTKEKARQCTVDSSS
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASREKNHRNDQLTKEKARQCTVDSSS

KAG6586022.1 CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4866.1Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

XP_022937859.1 CASP-like protein 5A2 [Cucurbita moschata]1.0e-4866.1Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

XP_022964943.1 CASP-like protein 5A2 [Cucurbita moschata]1.6e-4158.19Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        M+VSHATVHP EDPPTTDG +AP VRMKDMEGMPGTRGGLALRF QF+FAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAAC+SAGIT+LIDND+ SC ENHCVQFE ATAMAFISWF ALPSFFMNFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

XP_022969630.1 CASP-like protein 5A2 [Cucurbita maxima]5.1e-4865.54Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQ EIATAMAFISWFIALPSFFMNFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

TrEMBL top hitse value%identityAlignment
A0A5D3C7L3 CASP-like protein2.2e-4158.19Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        M+VSHATVHPVEDPPTTDG +AP VRMKDMEGMPGTRGGLALRF QF FAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAAC+SAGIT+LIDNDL SC +NHCVQFE ATAMAFISWF ALPSFF+NFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

A0A6J1FCE7 CASP-like protein5.0e-4966.1Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

A0A6J1HME3 CASP-like protein7.7e-4258.19Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        M+VSHATVHP EDPPTTDG +AP VRMKDMEGMPGTRGGLALRF QF+FAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAAC+SAGIT+LIDND+ SC ENHCVQFE ATAMAFISWF ALPSFFMNFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

A0A6J1HYU4 CASP-like protein2.2e-4157.63Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        M+VSHATVHP EDPPTTDG +AP VRMKDMEGMPGTRGGLALRF QF+FAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAAC+SAGIT+LIDND+ SC ENHCVQFE ATA+AFISWF ALPSFFMNFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

A0A6J1I0G8 CASP-like protein2.5e-4865.54Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL                                              
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQ EIATAMAFISWFIALPSFFMNFWSLASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

SwissProt top hitse value%identityAlignment
P0DI68 CASP-like protein 5A12.6e-2642.13Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPR-VRMKDMEGMPGTRGGLALRFSQFMFAAAAL---------------------------------------------
        M  S   VHPVE PP TD  + P  V MKD+ GMPGT GGL LR +QF+FA  AL                                             
Subjt:  MSVSHATVHPVEDPPTTDGEDAPR-VRMKDMEGMPGTRGGLALRFSQFMFAAAAL---------------------------------------------

Query:  ---------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                       IT+ LTF AACSSAGIT+LIDNDL+ C ENHC  F+ ATA+AF+SWF   PSF +NFWS+A+R
Subjt:  ---------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

P0DI69 CASP-like protein 5A29.7e-2639.55Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        M+ SH  VHPV  PP   G+  PR+RMK+++GMPGT GGL LR  QF FA  A                                               
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      +T+TLTFAAAC+SAGIT+LI NDL  C+ENHC ++E ATA+AF+SWF+   SF + FW LA+R
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

P0DI70 CASP-like protein 5A12.7e-2844.07Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------
        M+ SH  VHPVE PP TD   APRVRMKD +GMPGT GGLALR  QF FA  A                                               
Subjt:  MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL----------------------------------------------

Query:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                      +T+TLTFAAAC+SAGIT+LI NDL  C +NHC ++E ATAMAF+SWF+  PSF + FW LASR
Subjt:  --------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

Q10Q78 CASP-like protein 5A11.4e-2743.5Show/hide
Query:  MSVSHATVHPVEDPPTTDGEDAPR-VRMKDMEGMPGTRGGLALRFSQFMFAAAAL---------------------------------------------
        M  S   VHPVE PP  D  + PR V MKD+ GMPGT GGL LR +QF FAA AL                                             
Subjt:  MSVSHATVHPVEDPPTTDGEDAPR-VRMKDMEGMPGTRGGLALRFSQFMFAAAAL---------------------------------------------

Query:  ---------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLAS
                       IT+ LTF+AAC+S+GIT+LIDNDLD C ENHC  FE ATAMAF+SWF   PSF +NFWS+AS
Subjt:  ---------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLAS

Q9SKN3 CASP-like protein 5A25.5e-3751.96Show/hide
Query:  MSVSHATVHPVEDPP--TTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL--------------------------------------------
        M+VSHA+VHPVEDPP   T+ E+ PRVRM DMEGMPGT  GLALRF QF+FAAAAL                                            
Subjt:  MSVSHATVHPVEDPP--TTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL--------------------------------------------

Query:  ----------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                        +TSTLTFAAAC+SAGIT+LIDNDL+SC +NHCVQFE +TA+AFISWF ALPSF  NFWSLASR
Subjt:  ----------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

Arabidopsis top hitse value%identityAlignment
AT2G28370.1 Uncharacterised protein family (UPF0497)3.9e-3851.96Show/hide
Query:  MSVSHATVHPVEDPP--TTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL--------------------------------------------
        M+VSHA+VHPVEDPP   T+ E+ PRVRM DMEGMPGT  GLALRF QF+FAAAAL                                            
Subjt:  MSVSHATVHPVEDPP--TTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL--------------------------------------------

Query:  ----------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR
                        +TSTLTFAAAC+SAGIT+LIDNDL+SC +NHCVQFE +TA+AFISWF ALPSF  NFWSLASR
Subjt:  ----------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLASR

AT2G37200.1 Uncharacterised protein family (UPF0497)5.5e-2440.78Show/hide
Query:  MSVSHATVHPVED---PPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL-------------------------------------------
        M+VS   +HPV+     PT    D P VRMKD++GMPGT GGL LR SQF+ A  ++                                           
Subjt:  MSVSHATVHPVED---PPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAAL-------------------------------------------

Query:  -----------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLAS
                         +TSTLTFAAA +SAGIT+LI NDL  C  NHC +FE ATAMAFISWF   PSF +NFWSLA+
Subjt:  -----------------ITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMNFWSLAS

AT3G23200.1 Uncharacterised protein family (UPF0497)1.0e-0641.43Show/hide
Query:  MFAAAALITSTLTFAAACSSAGITILIDNDLDSCR-ENHCVQFEIATAMAFISWFIALPSFFMNFWSLAS
        +F     +TSTL+ A A SSAGIT+L   DL SC  E  C +++++ A+AF+ W     S     W LAS
Subjt:  MFAAAALITSTLTFAAACSSAGITILIDNDLDSCR-ENHCVQFEIATAMAFISWFIALPSFFMNFWSLAS

AT3G53850.1 Uncharacterised protein family (UPF0497)2.1e-0736.11Show/hide
Query:  MFAAAALITSTLTFAAACSSAGITILIDNDLDSCR---ENHCVQFEIATAMAFISWFIALPSFFMNFWSLAS
        +F     +T+ L+ AAACSSAG+ +L + D+  C    +  C+++E+A A++F++W     S  + FW LAS
Subjt:  MFAAAALITSTLTFAAACSSAGITILIDNDLDSCR---ENHCVQFEIATAMAFISWFIALPSFFMNFWSLAS

AT5G02060.1 Uncharacterised protein family (UPF0497)2.1e-0738.57Show/hide
Query:  MFAAAALITSTLTFAAACSSAGITILIDNDLDSCREN---HCVQFEIATAMAFISWFIALPSFFMNFWSL
        +F     +T+ L  AAACSSAG+T+L   D + CR+     C +F+I+  ++F +WF+A  S    FW L
Subjt:  MFAAAALITSTLTFAAACSSAGITILIDNDLDSCREN---HCVQFEIATAMAFISWFIALPSFFMNFWSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGAGCCATGCGACGGTTCATCCGGTCGAGGATCCCCCTACAACCGACGGCGAGGATGCGCCAAGGGTCAGGATGAAGGACATGGAAGGAATGCCTGGCACTCG
CGGAGGACTCGCCTTGCGGTTCTCTCAGTTTATGTTTGCGGCGGCAGCTCTGATCACATCTACTCTCACGTTTGCTGCAGCTTGTTCTTCTGCAGGCATTACAATCCTTA
TAGACAACGATCTAGATAGCTGCAGAGAGAACCACTGTGTACAGTTCGAGATCGCAACGGCCATGGCATTCATTAGTTGGTTTATTGCGTTGCCTTCTTTCTTCATGAAC
TTCTGGTCTCTTGCATCCCGGGAAAAGAATCATAGGAACGACCAGTTGACGAAGGAGAAAGCGAGACAGTGCACGGTGGACTCGTCTTCTGCAAGAACCTTCCATGCAAT
GGCTTGTTCAAAGGAAGCATGGCGCCCCATTGTCGATATGCAAATTCCAGCAGAGAAGGCCTTAAGGGCAGAGTCGCCGAGAATCTTATCCAAAGTGATGTCTTGCAACG
CAACCAAGGTCGTCTCCAACATGTCGAGGCCTGCTTGGTTGGGAAAGAGAGAACCTGTAGCTATAGCAGATCCATCGAGCCAGGATGATAGCCTTCGTTCCGATGGCAAG
CTTAATCCAGAGGGAGATATGGCAACTGCAACCCTCTGCACAGCTGAAACGACACTCCGAACGTACTGCCTTGCCATAGCTGCAACGTCATCCTGTAGGTTGCTACCAAA
CGAGAACTGGAAGGCAATAGTCAAAACTGATCTGAAGTTAGATGTTGATGCAGCAGCAGCAGCAGCATCTTGTGAAGCAGATGAACCAACTTCAAGATTGGAAGTGAGAT
CCATAGTCCTATTCGAGTTCTTCCATGTATGTTTTGAGTCACCCTGGATGATTCAACCAAACAAAAAGCATGTTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGAGCCATGCGACGGTTCATCCGGTCGAGGATCCCCCTACAACCGACGGCGAGGATGCGCCAAGGGTCAGGATGAAGGACATGGAAGGAATGCCTGGCACTCG
CGGAGGACTCGCCTTGCGGTTCTCTCAGTTTATGTTTGCGGCGGCAGCTCTGATCACATCTACTCTCACGTTTGCTGCAGCTTGTTCTTCTGCAGGCATTACAATCCTTA
TAGACAACGATCTAGATAGCTGCAGAGAGAACCACTGTGTACAGTTCGAGATCGCAACGGCCATGGCATTCATTAGTTGGTTTATTGCGTTGCCTTCTTTCTTCATGAAC
TTCTGGTCTCTTGCATCCCGGGAAAAGAATCATAGGAACGACCAGTTGACGAAGGAGAAAGCGAGACAGTGCACGGTGGACTCGTCTTCTGCAAGAACCTTCCATGCAAT
GGCTTGTTCAAAGGAAGCATGGCGCCCCATTGTCGATATGCAAATTCCAGCAGAGAAGGCCTTAAGGGCAGAGTCGCCGAGAATCTTATCCAAAGTGATGTCTTGCAACG
CAACCAAGGTCGTCTCCAACATGTCGAGGCCTGCTTGGTTGGGAAAGAGAGAACCTGTAGCTATAGCAGATCCATCGAGCCAGGATGATAGCCTTCGTTCCGATGGCAAG
CTTAATCCAGAGGGAGATATGGCAACTGCAACCCTCTGCACAGCTGAAACGACACTCCGAACGTACTGCCTTGCCATAGCTGCAACGTCATCCTGTAGGTTGCTACCAAA
CGAGAACTGGAAGGCAATAGTCAAAACTGATCTGAAGTTAGATGTTGATGCAGCAGCAGCAGCAGCATCTTGTGAAGCAGATGAACCAACTTCAAGATTGGAAGTGAGAT
CCATAGTCCTATTCGAGTTCTTCCATGTATGTTTTGAGTCACCCTGGATGATTCAACCAAACAAAAAGCATGTTGGTTAA
Protein sequenceShow/hide protein sequence
MSVSHATVHPVEDPPTTDGEDAPRVRMKDMEGMPGTRGGLALRFSQFMFAAAALITSTLTFAAACSSAGITILIDNDLDSCRENHCVQFEIATAMAFISWFIALPSFFMN
FWSLASREKNHRNDQLTKEKARQCTVDSSSARTFHAMACSKEAWRPIVDMQIPAEKALRAESPRILSKVMSCNATKVVSNMSRPAWLGKREPVAIADPSSQDDSLRSDGK
LNPEGDMATATLCTAETTLRTYCLAIAATSSCRLLPNENWKAIVKTDLKLDVDAAAAAASCEADEPTSRLEVRSIVLFEFFHVCFESPWMIQPNKKHVG