CuGenDBv2

Gene ID	CmoCh12G008360
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Transport membrane protein
Genome location	Cmo_Chr12:7657596..7658292
RNA-Seq Expression	CmoCh12G008360
Synteny	CmoCh12G008360
Gene Ontology terms	GO:0043953 - protein transport by the Tat complex (biological process) GO:0065002 - intracellular protein transmembrane transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033281 - TAT protein transport complex (cellular component) GO:0009977 - proton motive force dependent protein transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AHA47125.1 Sec-independent protein translocase [Amborella trichopoda]

2.0e-22

75.9

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSF
        +PNVWHF YFVGATSTNLL++KLQPKIYD+IMLTVRI FI S    VPVIVICLLELRGLSVETFTNN RFF  FS   ++ F
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSF

NP_054433.1 Sec-Y independent protein translocase component TatA [Marchantia paleacea]

2.6e-22

62.5

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHTSRYLVPNRRPFPYFF
        +PNVWHF Y +  TSTNLLI+KLQPKI+D+IMLTVRI FI S    VPV+VICLLE +G  V+TF  N RFF  F AF+SS F+TS YLV N R F Y F
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHTSRYLVPNRRPFPYFF

Query:  NNNI
         N +
Subjt:  NNNI

WP_189748829.1 twin-arginine translocase subunit TatC, partial [Streptomyces nojiriensis]

3.4e-22

79.49

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAF
        +PNVWHF YFVGATSTNLL++KLQPKIYD+IMLTVRI FI S    VPVIVICLLELRGLSVETFTNN RF   FS F
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAF

YP_003587258.1 transport membrane protein [Citrullus lanatus]

2.6e-22

77.78

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSS
        +PNVWHF YFVGATSTNLL++KLQPKIYDHIMLTVRI FILS    VPVIVI LLELRGLSVETFTNN RF   FS F ++
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSS

YP_003587370.1 transport membrane protein, partial [Cucurbita pepo]

1.5e-22

82.05

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAF
        +PNVWHF Y VGATSTNLLILKLQPKIYD+IMLTVRI FILS    VPVIVICLLELRGLSVETFTNN RF   FS F
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAF

TrEMBL top hits

e value

%identity

Alignment

A0A2H4NB30 AttB

1.7e-22

63.46

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHTSRYLVPNRRPFPYFF
        +PNVWHF YF+GATSTN L++KLQPKIYDHIMLTVRISFI S    VPVIVI L E RGLSVET TN  RF   F    ++        VPN RPFPYFF
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHTSRYLVPNRRPFPYFF

Query:  NNNI
        +N +
Subjt:  NNNI

A0A3B6PMN4 Uncharacterized protein

7.4e-23

68.75

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHTSRYLVPNRRPF
        +PNVWHF YFVGATSTN L++KLQPKIYD+IMLTVRI FI S    VPVIVICL E RGLSVETFT N   F+GFSAF+S SFHT         PF
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHTSRYLVPNRRPF

D5I3C8 Transport membrane protein

1.3e-22

77.78

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSS
        +PNVWHF YFVGATSTNLL++KLQPKIYDHIMLTVRI FILS    VPVIVI LLELRGLSVETFTNN RF   FS F ++
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSS

D5I3F6 Transport membrane protein (Fragment)

7.4e-23

82.05

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAF
        +PNVWHF Y VGATSTNLLILKLQPKIYD+IMLTVRI FILS    VPVIVICLLELRGLSVETFTNN RF   FS F
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAF

V9VDH3 Sec-independent protein translocase

9.7e-23

75.9

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSF
        +PNVWHF YFVGATSTNLL++KLQPKIYD+IMLTVRI FI S    VPVIVICLLELRGLSVETFTNN RFF  FS   ++ F
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSF

SwissProt top hits

e value

%identity

Alignment

P38459 Uncharacterized tatC-like protein ymf16

4.3e-20

64.71

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHT
        +PNVWHF Y +  TSTNLLI+KLQPKI+D+IMLTVRI FI S    VPV+VICLLE +G  V+TF  N RFF  F AF+SS F+T
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHT

P93312 Uncharacterized tatC-like protein ymf16

1.9e-23

72.29

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSF
        +PNVWHF YFVGATSTN L++KLQPKIYD+IMLTVRISFI S    VPVIVICLLE RGLS+ETFTNN RF   FS   ++ F
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSF

Arabidopsis top hits

e value

%identity

Alignment

ATMG00570.1 Sec-independent periplasmic protein translocase

5.1e-24

77.33

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Query:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGF
        +PNVWHF YFVGATSTN L++KLQPKIYDHIMLTVRISFI S    VPVIVICL E RGLS+ETFTNN RF   F
Subjt:  IPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILS----VPVIVICLLELRGLSVETFTNNCRFFNGF

Sequences

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CDS sequence

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ATGGAAATTCCCAATGTTTGGCACTTTTCATACTTCGTGGGTGCAACATCAACAAATTTGCTCATTCTCAAGTTACAGCCTAAGATCTATGACCATATTATGTTAACTGT
TCGTATTTCGTTCATTCTATCGGTACCTGTAATTGTGATATGTTTGCTAGAACTCAGGGGTCTTTCTGTGGAAACATTCACGAACAATTGTCGTTTTTTTAATGGTTTTT
CCGCTTTTTACAGCAGCTCTTTCCACACCTCTAGATATCTGGTGCCAAATCGTCGCCCGTTTCCTTATTTCTTTAATAATAATATATAG

mRNA sequence

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Protein sequence

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MEIPNVWHFSYFVGATSTNLLILKLQPKIYDHIMLTVRISFILSVPVIVICLLELRGLSVETFTNNCRFFNGFSAFYSSSFHTSRYLVPNRRPFPYFFNNNI

CmoCh12G008360 (gene) of Cucurbita moschata (Rifu) v1 genome