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CmoCh12G008410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G008410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionS-adenosyl-l-methionine decarboxylase leader peptide
Genome locationCmo_Chr12:7689091..7690218
RNA-Seq ExpressionCmoCh12G008410
SyntenyCmoCh12G008410
Gene Ontology termsGO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process)
GO:0006597 - spermine biosynthetic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586035.1 hypothetical protein SDJN03_18768, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2694.03Show/hide
Query:  NKPERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ++  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  NKPERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

KAG7020811.1 hypothetical protein SDJN02_17499, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-21100Show/hide
Query:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
        RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN
Subjt:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSN

TYJ96391.1 S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo var. makuwa]3.4e-2187.5Show/hide
Query:  ERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +RRSV+VVME K G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  ERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

XP_023536821.1 S-adenosylmethionine decarboxylase proenzyme-like [Cucurbita pepo subsp. pepo]2.6e-2198.21Show/hide
Query:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        MEAKRGTKKS SGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

XP_038890197.1 S-adenosylmethionine decarboxylase proenzyme-like [Benincasa hispida]5.0e-2085.71Show/hide
Query:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSV+VVM+ + G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  RRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

TrEMBL top hitse value%identityAlignment
A0A0A0LM83 Uncharacterized protein4.2e-1787.72Show/hide
Query:  MEAKRGTKKSRSGSSN-SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME K G KKS S SS+ SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKRGTKKSRSGSSN-SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A1S3BUN9 Adenosylmethionine decarboxylase2.3e-1889.29Show/hide
Query:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME K G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A5C7HXI6 Uncharacterized protein4.0e-1569.12Show/hide
Query:  QNKPERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        + + ++++VNV ME K G KKSRS SS      QYEAPLGY IEDVRP+GGIEKFRSAAYSNCVRKPS
Subjt:  QNKPERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A5D3BCP3 S-adenosylmethionine decarboxylase proenzyme-like1.7e-2187.5Show/hide
Query:  ERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +RRSV+VVME K G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  ERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A6N2M2H1 Uncharacterized protein6.8e-1575.81Show/hide
Query:  RSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        R VNVVME K G KKS S SSNS    QYE PLGY IED+RP+GGIEKFRSAAYSNCVR PS
Subjt:  RSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 93.1e-1261.4Show/hide
Query:  VMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +ME+K G KKS S SS       YEAPLGY IEDVRP+GGI+KF+S+ YSNC ++PS
Subjt:  VMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

AT3G25572.1 conserved peptide upstream open reading frame 113.4e-1165.52Show/hide
Query:  MEAKRGTKKSRSGSSNSSKRQQ--YEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME K G KK    SSNSS R    +EAPL Y IEDVRP+GGI+KFRSAAYSN   KPS
Subjt:  MEAKRGTKKSRSGSSNSSKRQQ--YEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

AT5G15948.1 conserved peptide upstream open reading frame 101.8e-1262.5Show/hide
Query:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME+K G KKS S SS       YEAPLGY IEDVRP GGI+KF+S+ YSNC ++PS
Subjt:  MEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTGCATGCGAAGCACGTGCAGTAAAGGATGGAAAGGCTGGGGGTATCGTTTCGATGTGTCGGCAATGGAGCAGAACAAACCTGAGAGAAGAAGCGTTAATGTTGT
GATGGAGGCGAAACGCGGTACGAAGAAGTCTCGCAGTGGTAGTAGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACATTATTGAAGACGTTCGTCCAC
ACGGTGGTATTGAGAAGTTCCGATCTGCTGCGTATTCCAACTGCGTGAGGAAACCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTGCATGCGAAGCACGTGCAGTAAAGGATGGAAAGGCTGGGGGTATCGTTTCGATGTGTCGGCAATGGAGCAGAACAAACCTGAGAGAAGAAGCGTTAATGTTGT
GATGGAGGCGAAACGCGGTACGAAGAAGTCTCGCAGTGGTAGTAGCAATAGTAGTAAAAGGCAACAATACGAAGCTCCTCTTGGTTACATTATTGAAGACGTTCGTCCAC
ACGGTGGTATTGAGAAGTTCCGATCTGCTGCGTATTCCAACTGCGTGAGGAAACCATCCTGA
Protein sequenceShow/hide protein sequence
MCCMRSTCSKGWKGWGYRFDVSAMEQNKPERRSVNVVMEAKRGTKKSRSGSSNSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS