; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G008890 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G008890
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive protein
Genome locationCmo_Chr12:8142573..8144277
RNA-Seq ExpressionCmoCh12G008890
SyntenyCmoCh12G008890
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]6.9e-8194.15Show/hide
Query:  MNTFHSHTQSP----AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
        MNTFHSHTQSP    AAAAEYFKMRRWPETQLG PPLQQQQQ+M   EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
Subjt:  MNTFHSHTQSP----AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD

Query:  GGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
        GGCGGGGGGEPS DRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Subjt:  GGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN

KAG7020902.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-6592.41Show/hide
Query:  MNTFHSHTQSP----AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
        MN FHSHTQSP    AAAAEYFKMRRWPETQLG PPLQQQQQ+M   EEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
Subjt:  MNTFHSHTQSP----AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD

Query:  GGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
        GGCGGGGGGEPS DRQLDLANAVPGHLVAYEDIENDLLLAGDLNW
Subjt:  GGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNW

XP_022938283.1 auxin-responsive protein IAA33 [Cucurbita moschata]5.9e-88100Show/hide
Query:  MNTFHSHTQSPAAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCG
        MNTFHSHTQSPAAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCG
Subjt:  MNTFHSHTQSPAAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCG

Query:  GGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
        GGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Subjt:  GGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]6.1e-7792.35Show/hide
Query:  MNTFHSHTQSP--AAAAEYFKMRRWPETQLG-SPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG
        MNTFHSHTQSP  AAAAEYFKMRRWPETQLG  PPLQQQQQQM      EEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG
Subjt:  MNTFHSHTQSP--AAAAEYFKMRRWPETQLG-SPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG

Query:  GCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
        GCG GGGGEPS DRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRR RGNN
Subjt:  GCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]1.7e-7490.59Show/hide
Query:  MNTFHSHTQSP---AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG
        MNTFHSHTQSP   AAAAEYFKMRRWPETQLG PPLQQQQ     EEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD 
Subjt:  MNTFHSHTQSP---AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG

Query:  GCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
            GGGGEPS +RQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Subjt:  GCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN

TrEMBL top hitse value%identityAlignment
A0A0A0LH98 Auxin-responsive protein3.3e-5273.29Show/hide
Query:  TQSP--AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGG
        TQSP  AAAAEYFKM RW + ++ SPP             ++ EEDFAAVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD        G
Subjt:  TQSP--AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGG

Query:  EPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
        E S +R LDL NAVPG++VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Subjt:  EPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

A0A1S3BRI6 Auxin-responsive protein5.1e-5372.67Show/hide
Query:  TQSP--AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGG
        TQSP  AAAAEYFKM RW E ++G P              ++ EEDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD        G
Subjt:  TQSP--AAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGG

Query:  EPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN
        E S +R+LDL NAVPG++VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Subjt:  EPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN

A0A6J1DKE3 Auxin-responsive protein2.6e-4972.55Show/hide
Query:  AAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQ
        AAAEY K RRWPE +  +                  EED +AVIP VTVVLEGRAICQRISLHKHASYESLAKALR MFV +DDGG G  G GE    R+
Subjt:  AAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQ

Query:  LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG
        LDL+NAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRG
Subjt:  LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRG

A0A6J1FIF6 Auxin-responsive protein2.8e-88100Show/hide
Query:  MNTFHSHTQSPAAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCG
        MNTFHSHTQSPAAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCG
Subjt:  MNTFHSHTQSPAAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCG

Query:  GGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
        GGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Subjt:  GGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN

A0A6J1I3D9 Auxin-responsive protein2.9e-7792.35Show/hide
Query:  MNTFHSHTQSP--AAAAEYFKMRRWPETQLG-SPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG
        MNTFHSHTQSP  AAAAEYFKMRRWPETQLG  PPLQQQQQQM      EEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG
Subjt:  MNTFHSHTQSP--AAAAEYFKMRRWPETQLG-SPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG

Query:  GCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
        GCG GGGGEPS DRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRR RGNN
Subjt:  GCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN

SwissProt top hitse value%identityAlignment
A2XB18 Auxin-responsive protein IAA109.0e-0731.03Show/hide
Query:  QMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGD
        + + ++++EE E    V   V V ++G  I +++ L+ H SY++LA AL  MF     G C             L L +    + + YED + D +L GD
Subjt:  QMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGD

Query:  LNWNDFVRVAKRIRIL
        + W  FV   KR+RI+
Subjt:  LNWNDFVRVAKRIRIL

Q0DWF2 Auxin-responsive protein IAA109.0e-0731.03Show/hide
Query:  QMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGD
        + + ++++EE E    V   V V ++G  I +++ L+ H SY++LA AL  MF     G C             L L +    + + YED + D +L GD
Subjt:  QMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGD

Query:  LNWNDFVRVAKRIRIL
        + W  FV   KR+RI+
Subjt:  LNWNDFVRVAKRIRIL

Q38831 Auxin-responsive protein IAA138.1e-0832.29Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G      G      + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q6K846 Auxin-responsive protein IAA99.6e-0939.58Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        V V  EG AI +++ L  H+SY+ LA  L RMF  +D       G  + + D   D A    G +V YED + D +L GD+ W+DF R  KR++IL
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q9FKM7 Auxin-responsive protein IAA339.2e-3664.71Show/hide
Query:  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRV
        E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD           G  S D  LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRV
Subjt:  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRV

Query:  AKRIRILPIKANSRRGRGN
        AKRIRILP+K N+R+ + N
Subjt:  AKRIRILPIKANSRRGRGN

Arabidopsis top hitse value%identityAlignment
AT2G33310.1 auxin-induced protein 135.8e-0932.29Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G      G      + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.2 auxin-induced protein 135.8e-0932.29Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G      G      + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.3 auxin-induced protein 135.8e-0932.29Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G      G      + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT4G14550.1 indole-3-acetic acid inducible 141.0e-0528.03Show/hide
Query:  LGSPPLQQQQQQM----EEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGE-PSCDRQLDLANAVPGH
        +G PP++  ++ +    +  E EE        +  V V ++G    +++ L  + SY+ L+ AL +MF     G  G  G  +  +  + +DL N+   +
Subjt:  LGSPPLQQQQQQM----EEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGE-PSCDRQLDLANAVPGH

Query:  LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + +YED + D +L GD+ W  FV   KR+RI+
Subjt:  LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT5G57420.1 indole-3-acetic acid inducible 336.6e-3764.71Show/hide
Query:  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRV
        E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD           G  S D  LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRV
Subjt:  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRV

Query:  AKRIRILPIKANSRRGRGN
        AKRIRILP+K N+R+ + N
Subjt:  AKRIRILPIKANSRRGRGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTTCTCCTCCGCTGCAGCAGCAGCA
GCAGCAGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCC
TCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCCCTCAGAAGGATGTTCGTTGACGACGATGACGGTGGCTGCGGCGGCGGTGGCGGTGGCGAACCCTCCTGTGAC
CGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTCCTTGCCGGTGATCTCAATTGGAATGATTTCGTGCGGGT
GGCGAAGAGAATTCGAATTCTGCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATAATTAA
mRNA sequenceShow/hide mRNA sequence
TTTTCTCTCAAAATCTAAACCCATGAACACCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTT
CTCCTCCGCTGCAGCAGCAGCAGCAGCAGATGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGA
GCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCCCTCAGAAGGATGTTCGTTGACGACGATGACGGTGGCTGCGGCGGCGGTGG
CGGTGGCGAACCCTCCTGTGACCGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTCCTTGCCGGTGATCTCA
ATTGGAATGATTTCGTGCGGGTGGCGAAGAGAATTCGAATTCTGCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATAATTAAATTATATATATTTTATGACAAACC
CATC
Protein sequenceShow/hide protein sequence
MNTFHSHTQSPAAAAEYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCD
RQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN