CuGenDBv2

Gene ID	CmoCh12G009080
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	cytochrome c oxidase subunit 3
Genome location	Cmo_Chr12:8336531..8336785
RNA-Seq Expression	CmoCh12G009080
Synteny	CmoCh12G009080
Gene Ontology terms	GO:0019646 - aerobic electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016020 - membrane (cellular component) GO:0004129 - cytochrome-c oxidase activity (molecular function)
InterPro domains	IPR000298 - Cytochrome c oxidase subunit III-like IPR013833 - Cytochrome c oxidase, subunit III, 4-helical bundle IPR024791 - Cytochrome c oxidase subunit III IPR035973 - Cytochrome c oxidase subunit III-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AMC32834.1 cytochrome c oxidase subunit 3 [Cleomella serrulata]

1.9e-23

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

KAG7020921.1 Cytochrome c oxidase subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.9e-27

95.31

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Query:  MEYYQARFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

KFK21897.1 hypothetical protein AALP_AAs69413U000100, partial [Arabis alpina]

1.9e-23

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

YP_003587238.1 cytochrome c oxidase subunit 3 [Citrullus lanatus]

1.9e-23

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

YP_004927511.1 cox3 [Brassica oleracea]

1.9e-23

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

TrEMBL top hits

e value

%identity

Alignment

A0A0D6CA04 Cytochrome c oxidase subunit 3

9.4e-24

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

A0A0G3BGA8 Cytochrome c oxidase subunit 3

9.4e-24

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

A0A224ATZ6 Cytochrome c oxidase subunit 3

9.4e-24

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

A0A3P6DTR8 Cytochrome c oxidase subunit 3

9.4e-24

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

E9KZN7 Cytochrome c oxidase subunit 3

9.4e-24

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

SwissProt top hits

e value

%identity

Alignment

P08745 Cytochrome c oxidase subunit 3

1.8e-24

70.24

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA  TISDS                    TLF IICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

P14853 Cytochrome c oxidase subunit 3

2.5e-26

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

P15953 Cytochrome c oxidase subunit 3

1.4e-24

67.86

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLI+CGIRQYLG +TK+HHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

P92514 Cytochrome c oxidase subunit 3

2.5e-26

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

Q03227 Cytochrome c oxidase subunit 3

2.4e-24

69.05

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLG +TKEHHVGFEAAAWY HFVDVV LF FVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

Arabidopsis top hits

e value

%identity

Alignment

AT2G07687.1 Cytochrome c oxidase, subunit III

1.8e-27

72.62

Show/hide

Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

ATMG00730.1 cytochrome c oxidase subunit 3

1.8e-27

72.62

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Query:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI
        MEYYQA FTISDS                    TLFLIICGIRQYLGHLTKEHHVGFEAAAWY HFVDVV LFLFVSIYWWGGI
Subjt:  MEYYQARFTISDS--------------------TLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

Sequences

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CDS sequence

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ATGGAATATTATCAAGCACGCTTCACTATTTCAGATAGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACGTTGGCTT
TGAAGCAGCTGCATGGTACTGTCATTTTGTAGACGTGGTTCTGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGA

mRNA sequence

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ATGGAATATTATCAAGCACGCTTCACTATTTCAGATAGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACGTTGGCTT
TGAAGCAGCTGCATGGTACTGTCATTTTGTAGACGTGGTTCTGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGA

Protein sequence

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MEYYQARFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYCHFVDVVLLFLFVSIYWWGGI

CmoCh12G009080 (gene) of Cucurbita moschata (Rifu) v1 genome