; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G009530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G009530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionU3 small nucleolar RNA-associated protein 11
Genome locationCmo_Chr12:8900843..8905744
RNA-Seq ExpressionCmoCh12G009530
SyntenyCmoCh12G009530
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0032040 - small-subunit processome (cellular component)
InterPro domainsIPR007144 - Small-subunit processome, Utp11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586143.1 putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyrosperma subsp. sororia]5.3e-11699.56Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSK RSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDELTNPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

KAG7020966.1 putative U3 small nucleolar RNA-associated protein 11 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-11498.25Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTA+QLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQKVQSEKRKIEKLTA LHSLDNQPSNKHIYFAEDREEANEIQSRSSK RSVASSEAVPDSIKRKTISSYKEL+ARRSRVSELEKLYMDMTLQQELMK
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDELTNPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

XP_022937708.1 probable U3 small nucleolar RNA-associated protein 11 [Cucurbita moschata]8.2e-117100Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDELTNPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

XP_022965485.1 probable U3 small nucleolar RNA-associated protein 11 [Cucurbita maxima]4.5e-11599.13Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSK RSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDELTNPTSK VYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

XP_023536927.1 probable U3 small nucleolar RNA-associated protein 11 [Cucurbita pepo subsp. pepo]1.0e-11498.69Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSLKNAVPKRPYKERAQPN RKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSK RSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDEL NPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

TrEMBL top hitse value%identityAlignment
A0A0A0LKH7 U3 small nucleolar RNA-associated protein 117.1e-10690.83Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY++RAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQK+QSEK+KIEKLTATLHSLDNQPSNKH+YFAEDREEANEI SRSSK   VASSEAVPDSI+RKTISSYKELEARRSRV+ELEKLYMDMTLQQEL K
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDEL+NPT KPVYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

A0A1S3B400 U3 small nucleolar RNA-associated protein 111.9e-10690.83Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES+VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQK+QSEK+KIEKLTATLHSLDNQPSNKH+YFAEDREEANEI SRSSK   VASSEAVPDSI+RKT++SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDE+ NPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

A0A5A7TX11 U3 small nucleolar RNA-associated protein 111.9e-10690.83Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY+ERAKA+HKKEDTLRKLKEKAAFKNPDEFYFKMI+TRTVDGVH+PES+VNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQK+QSEK+KIEKLTATLHSLDNQPSNKH+YFAEDREEANEI SRSSK   VASSEAVPDSI+RKT++SYKELEARRSRVSELEKLYMDMTLQQEL K
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDE+ NPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

A0A6J1FGQ3 U3 small nucleolar RNA-associated protein 114.0e-117100Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDELTNPTSKPVYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

A0A6J1HNU6 U3 small nucleolar RNA-associated protein 112.2e-11599.13Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSK RSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLREDELTNPTSK VYKWRAERKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

SwissProt top hitse value%identityAlignment
Q55C50 Probable U3 small nucleolar RNA-associated protein 114.8e-2738.77Show/hide
Query:  SLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYI
        +L+  +P+R  +ER QP S KK G LE+ KDYVERAK Y+ K DTL+KLK +AAFKNPDEF +KMI ++ VDGVH   S+ +    EQ++ +KTQD  Y+
Subjt:  SLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYI

Query:  LQKVQSEKRKIEKLTATLHSLDN--QPSNKHIYFAEDREEANEIQSR---SSKDRSVASSEAVPDSIKRK--------------------TISSYKELEA
          K +++ +KIE+L ATL  +D+  +P+ + IY  +++E  N   ++   +  D    S   +P   K K                    T +SYKEL+ 
Subjt:  LQKVQSEKRKIEKLTATLHSLDN--QPSNKHIYFAEDREEANEIQSR---SSKDRSVASSEAVPDSIKRK--------------------TISSYKELEA

Query:  RRSRVSELEKLYMDMTLQQELMKKGRK
        R+ R  +L K  MD++  +  +K+G K
Subjt:  RRSRVSELEKLYMDMTLQQELMKKGRK

Q8R5K5 Probable U3 small nucleolar RNA-associated protein 111.0e-2433.61Show/hide
Query:  KRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSE
        +R Y+ER+QP  RK  GLLEK KDY  RA  Y KK++ L+ L++KA  KNPDEFY+KM + +  DGVH  +    + T EQL LM+TQD  YI  K  +E
Subjt:  KRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSE

Query:  KRKIEKLTATLHSLDNQ--PSNKHIYFAEDREEANE----------------------IQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSEL
         +KIE+L + LH LD Q    N+H++F + ++E  +                      I++   +     +++     I ++    Y  L  R  R  +L
Subjt:  KRKIEKLTATLHSLDNQ--PSNKHIYFAEDREEANE----------------------IQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSEL

Query:  EKLYMDMTLQQELMKKGRKRKLREDELTNPTSKPVYKWRAERKR
          +   +  +++LM K +K K++++ + +P    +YK+++ RKR
Subjt:  EKLYMDMTLQQELMKKGRKRKLREDELTNPTSKPVYKWRAERKR

Q8S1Z1 Probable U3 small nucleolar RNA-associated protein 116.2e-8368.12Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSL+NA+ +R +KERAQP SRKKFGLLEKHKDY+ RAKA+H+KE+T+RKLKEKA+F+NPDEFYFKMI ++TVDG+HRP+ + NKYT ++LML+KT+D G
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        YILQ +QSEK+KIEKL++ LH LDN+  NKH+YFAEDREE  EIQSR  +  S    + +P  IKRKT SSY+ELE R+ RV +LEKLY DM LQ+EL K
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
         GRKRKLREDE+ N TS+PVYKWRA+RKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

Q9CZJ1 Probable U3 small nucleolar RNA-associated protein 115.3e-2635.66Show/hide
Query:  KRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSE
        +R ++ER+QP  RK+ GLLEK KDY  RA  YHKK+D LR L++KA  KNPDEFY+KM + +  DGVH  +    + TAEQL LM+TQD  YI  K  +E
Subjt:  KRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSE

Query:  KRKIEKLTATLHSLDNQ--PSNKHIYFAEDREE------------ANEIQSRSSKDRSVASSE------AVPDS-IKRKTISSYKELEARRSRVSELEKL
         +KIE+L + LH LD Q     KH++F + ++E            A E+  R      + + +      A P + +KR      K+ +    R+   ++L
Subjt:  KRKIEKLTATLHSLDNQ--PSNKHIYFAEDREE------------ANEIQSRSSKDRSVASSE------AVPDS-IKRKTISSYKELEARRSRVSELEKL

Query:  YM---DMTLQQELMKKGRKRKLREDELTNPTSKPVYKWRAERKR
        ++    +  +++LM K +K K++++ + +P    +Y+++  RKR
Subjt:  YM---DMTLQQELMKKGRKRKLREDELTNPTSKPVYKWRAERKR

Q9M223 Probable U3 small nucleolar RNA-associated protein 119.0e-7461.57Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSL+NA+P+  +KER+QP +RK+FG+LEKHKDY+ RA AYHKK++TL+ L++KAAFKNPDEF FKMI ++TVDG HRP+ +VNKY+AE+LM+MKTQD G
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        Y+ QK QSEK KI+KLTA+L    +Q S +H+Y+AEDREEA E++ +  + +S  S+  +P  IK+K   SY++LE R+SR  +LEKLY DM++Q+EL K
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLR+DEL NP  K VYKWRA+RKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR

Arabidopsis top hitse value%identityAlignment
AT3G60360.1 embryo sac development arrest 146.4e-7561.57Show/hide
Query:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG
        MSSL+NA+P+  +KER+QP +RK+FG+LEKHKDY+ RA AYHKK++TL+ L++KAAFKNPDEF FKMI ++TVDG HRP+ +VNKY+AE+LM+MKTQD G
Subjt:  MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAG

Query:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK
        Y+ QK QSEK KI+KLTA+L    +Q S +H+Y+AEDREEA E++ +  + +S  S+  +P  IK+K   SY++LE R+SR  +LEKLY DM++Q+EL K
Subjt:  YILQKVQSEKRKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMK

Query:  KGRKRKLREDELTNPTSKPVYKWRAERKR
        KGRKRKLR+DEL NP  K VYKWRA+RKR
Subjt:  KGRKRKLREDELTNPTSKPVYKWRAERKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCCTTAAAGAATGCGGTTCCTAAACGGCCTTACAAGGAGAGAGCTCAGCCGAATTCTCGGAAGAAATTTGGGCTTCTTGAGAAGCATAAAGACTATGTCGAGCG
TGCTAAGGCTTATCATAAGAAGGAAGATACGTTACGGAAACTTAAAGAGAAAGCAGCATTCAAGAATCCAGATGAGTTTTACTTTAAGATGATTAAGACGAGAACAGTTG
ACGGAGTCCATAGACCAGAGAGTCAAGTAAATAAGTATACTGCAGAGCAACTCATGTTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAGTGCAGAGTGAGAAA
AGGAAAATTGAAAAACTGACAGCCACGTTGCATTCGCTTGATAATCAGCCATCAAATAAGCATATTTACTTTGCTGAAGACAGGGAGGAGGCCAATGAAATTCAATCTCG
CTCTTCCAAAGATAGATCAGTGGCATCGTCTGAGGCAGTTCCGGACAGTATTAAAAGGAAAACCATTTCGTCTTACAAAGAACTGGAGGCAAGGAGGAGTAGAGTCAGTG
AATTGGAGAAACTTTATATGGATATGACACTGCAACAGGAATTAATGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAGCTCACCAATCCAACTTCAAAACCTGTA
TACAAGTGGAGGGCAGAACGAAAGCGATAA
mRNA sequenceShow/hide mRNA sequence
GTTCCTCCTCCCTCTCAGCAGATCAGTGCCGCCGCTTCCGCCGCCACGTCCCTCCGCCTTCTGCCGCTTAGGAAGCTTATTTTGTTGTAATTGCAATGTCGTCCTTAAAG
AATGCGGTTCCTAAACGGCCTTACAAGGAGAGAGCTCAGCCGAATTCTCGGAAGAAATTTGGGCTTCTTGAGAAGCATAAAGACTATGTCGAGCGTGCTAAGGCTTATCA
TAAGAAGGAAGATACGTTACGGAAACTTAAAGAGAAAGCAGCATTCAAGAATCCAGATGAGTTTTACTTTAAGATGATTAAGACGAGAACAGTTGACGGAGTCCATAGAC
CAGAGAGTCAAGTAAATAAGTATACTGCAGAGCAACTCATGTTGATGAAGACCCAAGATGCAGGGTATATACTTCAGAAAGTGCAGAGTGAGAAAAGGAAAATTGAAAAA
CTGACAGCCACGTTGCATTCGCTTGATAATCAGCCATCAAATAAGCATATTTACTTTGCTGAAGACAGGGAGGAGGCCAATGAAATTCAATCTCGCTCTTCCAAAGATAG
ATCAGTGGCATCGTCTGAGGCAGTTCCGGACAGTATTAAAAGGAAAACCATTTCGTCTTACAAAGAACTGGAGGCAAGGAGGAGTAGAGTCAGTGAATTGGAGAAACTTT
ATATGGATATGACACTGCAACAGGAATTAATGAAAAAGGGTCGCAAACGTAAACTCCGGGAAGATGAGCTCACCAATCCAACTTCAAAACCTGTATACAAGTGGAGGGCA
GAACGAAAGCGATAACAAAGTTCCTAGCCCAGGCAGATTTTGCAGAAGATGTAGTCAGTTATATATAAGTTCACAACTCGCAATATCCAAGGAGATGGATAATCACCTGT
TGAAACTCGCAATATAATCACATTCTGGTTCCTTGTGTTCGTTTTTGTCAAATTTTGTGTTCACAGCTTAATTAATTAAACATGCTATATTTCTTCTGGGGTATGAAGAA
TGTAATCTAATTATTGTTACCGTTAATTTACTGAGTAATATATAGTTTTGTTCTTCAATTCTACTTTGCTGAGGGCTTGGCAGCCTCTTCTGTTTTACTTTGTTTATTCA
AGATTTTGTTTATAG
Protein sequenceShow/hide protein sequence
MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNPDEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEK
RKIEKLTATLHSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRSRVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKPV
YKWRAERKR