CuGenDBv2

Gene ID	CmoCh12G010410
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Antigenic heat-stable 120 kDa protein
Genome location	Cmo_Chr12:9682720..9685148
RNA-Seq Expression	CmoCh12G010410
Synteny	CmoCh12G010410
Gene Ontology terms	GO:0006415 - translational termination (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016149 - translation release factor activity, codon specific (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7021055.1 hypothetical protein SDJN02_17743, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-94

96.91

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKAN------EELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNG
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKAN      EELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNG
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKAN------EELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNG

Query:  GLGKEINDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        GLGKEINDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
Subjt:  GLGKEINDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

XP_022938214.1 uncharacterized protein LOC111444361 [Cucurbita moschata]

1.3e-96

100

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

XP_022965964.1 uncharacterized protein LOC111465686 [Cucurbita maxima]

1.2e-94

98.4

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGK KEPEDDYHKEKSQP+RKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

XP_023536782.1 uncharacterized protein LOC111798060 [Cucurbita pepo subsp. pepo]

3.0e-96

99.47

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQP+RKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

XP_038890481.1 uncharacterized protein LOC120080024 isoform X1 [Benincasa hispida]

1.7e-88

92.02

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        M SSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLFPP+NGD+PSVKETEN+KGKGKEPED+YHKEKS P+RKRSF DMNGK+EN V DGAGE+LA  EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGM0 Uncharacterized protein

6.0e-87

90.43

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLF P+NGD+P VKETE++KGKGKEPED+YHKEKSQP+RKRSF DMNGK+E+ + DGAGE+LA  EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

A0A1S3BWQ6 uncharacterized protein LOC103494285

2.7e-87

92.02

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLF P+NGD+P VKETE +KGKGKEPED+YHKEKSQPVRKRSF DMNGK+EN V DGAGE+LA  EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

A0A5D3BAZ9 Uncharacterized protein

2.7e-87

92.02

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLF P+NGD+P VKETE +KGKGKEPED+YHKEKSQPVRKRSF DMNGK+EN V DGAGE+LA  EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

A0A6J1FDE9 uncharacterized protein LOC111444361

6.4e-97

100

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

A0A6J1HSD3 uncharacterized protein LOC111465686

6.0e-95

98.4

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
        NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGK KEPEDDYHKEKSQP+RKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12530.1 unknown protein

3.0e-14

31.96

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        M  +  I+ E+V+E L +DG  D LRLKII +LK NE+L+N  I +V++S  L   GA+    R+L DA+ +E+ + +L + S  +W +I    G+  EI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETEND-KGKGKEPEDDYH----KEKSQPVRKRSFIDMNGKD-ENNVVDGAGENLAATEEHSRSP
         +TV+ V+  LS       P       S +E E+      KE   D++     ++ Q + K +  D  G+   ++V D  GE     EE    P
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETEND-KGKGKEPEDDYH----KEKSQPVRKRSFIDMNGKD-ENNVVDGAGENLAATEEHSRSP

AT1G56420.1 unknown protein

4.0e-51

60.94

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI
        MSSSSVI PEDVLE LMNDGTID+LRL+IINQLKANEELK+TTIKM E+SKVLNTPGAEKQTKRELFDALRQELE PVLEKASKSVW+LI++  GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVV----DGAGENLAATEEHSRSP
        N+TVE+VFC LSG+EPP +   N     V++T  +  K  E +D     K++P +KRS  ++N  +  + V       G++   T E  ++P
Subjt:  NDTVEKVFCRLSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVV----DGAGENLAATEEHSRSP

Sequences

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CDS sequence

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ATGAGTTCGTCTTCAGTAATCACTCCAGAAGATGTGTTGGAGTCGCTGATGAATGATGGTACTATCGATTCTCTTAGGTTGAAGATCATCAACCAGCTCAAAGCCAATGA
GGAGCTTAAGAACACCACAATTAAAATGGTAGAACAGAGCAAAGTCCTCAACACGCCTGGGGCAGAGAAACAGACCAAAAGAGAGTTATTTGATGCTCTTCGACAGGAAC
TCGAAGCACCCGTGCTTGAGAAAGCCTCTAAATCTGTTTGGGAATTGATTTTGGACAACGGTGGATTGGGCAAAGAAATAAACGACACAGTCGAAAAAGTATTTTGTCGA
CTGAGTGGCAAGGAACCTCCATTGTTTCCTCCCGAAAATGGGGATATCCCATCGGTCAAAGAAACTGAGAACGACAAAGGGAAAGGAAAAGAACCTGAAGATGATTATCA
CAAGGAGAAATCACAACCTGTTAGGAAAAGGAGTTTCATTGACATGAATGGCAAAGACGAAAACAATGTCGTAGATGGAGCTGGAGAAAATCTAGCTGCAACTGAGGAAC
ATAGTAGGTCACCTTAG

mRNA sequence

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AGAAACACTCATCGAAATTTTTCTCCGGCGGTAGCCCTCAGAATTTAATCAACGAGCAGGTTGTTGCGATTTTGAAGTGAGGAGAAAATATTGAAGAGAAAGGGAGACAG
CGGAATCGAGGAGATTCATGAGTTCGTCTTCAGTAATCACTCCAGAAGATGTGTTGGAGTCGCTGATGAATGATGGTACTATCGATTCTCTTAGGTTGAAGATCATCAAC
CAGCTCAAAGCCAATGAGGAGCTTAAGAACACCACAATTAAAATGGTAGAACAGAGCAAAGTCCTCAACACGCCTGGGGCAGAGAAACAGACCAAAAGAGAGTTATTTGA
TGCTCTTCGACAGGAACTCGAAGCACCCGTGCTTGAGAAAGCCTCTAAATCTGTTTGGGAATTGATTTTGGACAACGGTGGATTGGGCAAAGAAATAAACGACACAGTCG
AAAAAGTATTTTGTCGACTGAGTGGCAAGGAACCTCCATTGTTTCCTCCCGAAAATGGGGATATCCCATCGGTCAAAGAAACTGAGAACGACAAAGGGAAAGGAAAAGAA
CCTGAAGATGATTATCACAAGGAGAAATCACAACCTGTTAGGAAAAGGAGTTTCATTGACATGAATGGCAAAGACGAAAACAATGTCGTAGATGGAGCTGGAGAAAATCT
AGCTGCAACTGAGGAACATAGTAGGTCACCTTAGTCGAGTTTGAAGACAAAAACATGTCATAAACCATGCTAGGATGGCAGGTCTTGCAGGTCTGTGATCATTAGCTCGA
GTTTTTCGTACTTAATCTGATGAGCATGGCCTGTCAAACACAAATGAAACTCGACACTATGCACGCTGCACACGCAATTGATGGGTCCGAAATTATGTTTGTGTGGATGT
ATATGAACACTTCCATGATCTTTAATGCTCTGGTTAGGAAATAGGACAGTTAGTCGTTAAAAAAACTAGCTTTTGTAGCCTAATCTATCCATGTCAATGCTATGAAAAAC
AATACAAATATTGATTGGCGTTGTTGTGCAGTATTCAGTAGATTACATCACTGATTAAGTTTTCAAGAA

Protein sequence

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MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNGGLGKEINDTVEKVFCR
LSGKEPPLFPPENGDIPSVKETENDKGKGKEPEDDYHKEKSQPVRKRSFIDMNGKDENNVVDGAGENLAATEEHSRSP

CmoCh12G010410 (gene) of Cucurbita moschata (Rifu) v1 genome