CuGenDBv2

Gene ID	CmoCh12G010610
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	CST complex subunit TEN1
Genome location	Cmo_Chr12:9798445..9800645
RNA-Seq Expression	CmoCh12G010610
Synteny	CmoCh12G010610
Gene Ontology terms	GO:0000723 - telomere maintenance (biological process) GO:0006457 - protein folding (biological process) GO:0009408 - response to heat (biological process) GO:0019827 - stem cell population maintenance (biological process) GO:0048367 - shoot system development (biological process) GO:0051974 - negative regulation of telomerase activity (biological process) GO:1990879 - CST complex (cellular component) GO:0003697 - single-stranded DNA binding (molecular function) GO:0010521 - telomerase inhibitor activity (molecular function) GO:0044183 - protein folding chaperone (molecular function)
InterPro domains	IPR029146 - CST complex subunit Ten1, animal and plant type

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7021073.1 CST complex subunit TEN1 [Cucurbita argyrosperma subsp. argyrosperma]

3.4e-56

89.86

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVT-------------GKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVT             G+LVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVT-------------GKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEA

Query:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
        TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  TLQARVGRNVDGIDLNLYHQSLQLLKQFQADHLNKRTN

XP_022156372.1 CST complex subunit TEN1 isoform X1 [Momordica charantia]

1.7e-55

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
        MAS+AIKSGALV LKDLKPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNV+LKIDT+HLREL+FRIGSIYQFIGELLVQS+NEATLQARVGRNVDGI
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI

Query:  DLNLYHQSLQLLKQFQADHLNKRTN
        DLNLYHQSLQLL+QFQADH NKRTN
Subjt:  DLNLYHQSLQLLKQFQADHLNKRTN

XP_022937765.1 CST complex subunit TEN1 [Cucurbita moschata]

2.5e-59

100

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI

Query:  DLNLYHQSLQLLKQFQADHLNKRTN
        DLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  DLNLYHQSLQLLKQFQADHLNKRTN

XP_022966009.1 CST complex subunit TEN1-like [Cucurbita maxima]

7.3e-59

99.2

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDT+HLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI

Query:  DLNLYHQSLQLLKQFQADHLNKRTN
        DLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  DLNLYHQSLQLLKQFQADHLNKRTN

XP_023536947.1 CST complex subunit TEN1-like [Cucurbita pepo subsp. pepo]

1.6e-58

98.4

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDT+HLRELTFRIGSIYQFIGELLVQS+NEATLQARVGRNVDGI
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI

Query:  DLNLYHQSLQLLKQFQADHLNKRTN
        DLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  DLNLYHQSLQLLKQFQADHLNKRTN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFY0 Uncharacterized protein

9.3e-52

89.68

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Query:  MASAAIKSGALVSLKDL-KPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDG
        MA +AIKSGALVSLKDL  PSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNV+LKIDT+HL EL+ RIGSIYQFIGELLVQS+NEA L+ARVGRNVDG
Subjt:  MASAAIKSGALVSLKDL-KPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDG

Query:  IDLNLYHQSLQLLKQFQADHLNKRTN
        IDLNLYHQSLQLL+QFQADHLNKRTN
Subjt:  IDLNLYHQSLQLLKQFQADHLNKRTN

A0A1S3BY71 CST complex subunit TEN1

7.6e-54

92.06

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Query:  MASAAIKSGALVSLKDL-KPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDG
        MA +AIKSGALVSLKDL KPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNV+LKIDT+HLREL+ RIGSIYQFIGELLVQS+NEA LQARVGRNVDG
Subjt:  MASAAIKSGALVSLKDL-KPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDG

Query:  IDLNLYHQSLQLLKQFQADHLNKRTN
        IDLNLYHQSLQLL+QFQADHLNKRTN
Subjt:  IDLNLYHQSLQLLKQFQADHLNKRTN

A0A6J1DRX0 CST complex subunit TEN1 isoform X1

8.2e-56

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
        MAS+AIKSGALV LKDLKPSSEFFKDGASLRVTGKLVEYSVETA+A+IVDGNV+LKIDT+HLREL+FRIGSIYQFIGELLVQS+NEATLQARVGRNVDGI
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI

Query:  DLNLYHQSLQLLKQFQADHLNKRTN
        DLNLYHQSLQLL+QFQADH NKRTN
Subjt:  DLNLYHQSLQLLKQFQADHLNKRTN

A0A6J1FHR1 CST complex subunit TEN1

1.2e-59

100

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI

Query:  DLNLYHQSLQLLKQFQADHLNKRTN
        DLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  DLNLYHQSLQLLKQFQADHLNKRTN

A0A6J1HSH0 CST complex subunit TEN1-like

3.5e-59

99.2

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
        MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDT+HLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGI

Query:  DLNLYHQSLQLLKQFQADHLNKRTN
        DLNLYHQSLQLLKQFQADHLNKRTN
Subjt:  DLNLYHQSLQLLKQFQADHLNKRTN

SwissProt top hits

e value

%identity

Alignment

Q6NME7 CST complex subunit TEN1

2.3e-31

57.38

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGEL-LVQSENEATLQARVGRNVDG
        MA + I+ G  ++L++L PSS F+K+G SLRVT  L  YSVETAI +I DG  SLKI+T+++R+++FR+GSIYQFIGEL + Q  NEA LQAR GRNVDG
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGEL-LVQSENEATLQARVGRNVDG

Query:  IDLNLYHQSLQLLKQFQADHLN
        ID+NLY ++++LL+QF  +  N
Subjt:  IDLNLYHQSLQLLKQFQADHLN

Arabidopsis top hits

e value

%identity

Alignment

AT1G56260.1 unknown protein

1.6e-32

57.38

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Query:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGEL-LVQSENEATLQARVGRNVDG
        MA + I+ G  ++L++L PSS F+K+G SLRVT  L  YSVETAI +I DG  SLKI+T+++R+++FR+GSIYQFIGEL + Q  NEA LQAR GRNVDG
Subjt:  MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGEL-LVQSENEATLQARVGRNVDG

Query:  IDLNLYHQSLQLLKQFQADHLN
        ID+NLY ++++LL+QF  +  N
Subjt:  IDLNLYHQSLQLLKQFQADHLN

Sequences

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CDS sequence

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ATGGCATCGGCTGCAATAAAATCAGGGGCGTTGGTTTCACTGAAAGACCTGAAGCCATCTTCAGAGTTCTTCAAGGATGGGGCTTCACTTAGAGTTACTGGAAAGTTAGT
GGAGTATTCTGTGGAGACAGCCATTGCCATAATCGTCGATGGAAATGTTAGCTTGAAGATCGACACACGGCATCTGAGAGAGCTTACCTTTCGCATTGGCTCCATATATC
AATTTATTGGTGAACTACTTGTTCAATCAGAAAATGAGGCAACTCTGCAGGCACGTGTTGGTAGGAATGTTGACGGCATTGACCTGAACCTGTATCATCAGTCCCTACAA
CTGTTAAAACAATTTCAGGCTGATCACTTAAACAAGAGAACAAATTAG

mRNA sequence

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AGTTATTTCTTTTAGTCCGAAATCCGAATGTAGTTCGAAGAATTTGTTACCTTAGTGGAATGCATGATGAATCTGTTTGCTAGTGGAAACTTTACTGGATGGAGTATATT
TAAGGTTTCCAAGATCAAAATGACATGAAATGGACAAGGAATTTGGTAAAAACGCAACTTATTATGTGTAAAGGAGTGGGGGACTTTATTGTTGCTTGGAAGTGGGAAGA
AGAATCCTGTGATGGGAAGTTGACAATGGCTGCTTGATTGAATAACTTTCTGAATGTTTATAGTAGGTAATCATAAATCATAATTCAATTTAGAGACGGGTTGGGTTAAA
AGCATTGTGTGAAGATCTGAGACTGTGTGACATGGTAACATGTGACATGTTAGAGTAAAGAACAATGGTTGAAGGGCTAATTTCGTACTTTGTAAGACTAATTTAATAGT
TATTCTATCATATGTGAGATCCCACCTCGGTTGGAGAGGGAAACGAAACATTCCTTATAGAATGTAGAAACCTTTCCCTAGTAGACGCGTTTCAGAGCCTTAAGGGGAAG
CCCAAAAGGGAAAGTCCAAAGAGGATAATATCTGCTAGCAATGGGCTTGAACTGTTACCACAGACACTGGGTCTCCAAGGGGGTGGATTGTGCGATCCTACATCGGTTAG
AGAGGAGAAAAAAATATTCTTTATAAGAGTGAAACCTTTTCCGTAGTAGACGCGTTTCAAAACTTTGAGGGAAAGCCCAAAGAGGACAATAACTGCAAGCGGTGGGCTTG
AGCTGTTACATTTTGTCTTACGAAGAATTTATTGATTGTTTACTTAGATTTACATATCTTTCCTGTAGGATTTGACTCTTAGTAGGGAGCAAAGTGCTTTTTGTGAGAAA
AAGAATTATACTGGATGGCATCGGCTGCAATAAAATCAGGGGCGTTGGTTTCACTGAAAGACCTGAAGCCATCTTCAGAGTTCTTCAAGGATGGGGCTTCACTTAGAGTT
ACTGGAAAGTTAGTGGAGTATTCTGTGGAGACAGCCATTGCCATAATCGTCGATGGAAATGTTAGCTTGAAGATCGACACACGGCATCTGAGAGAGCTTACCTTTCGCAT
TGGCTCCATATATCAATTTATTGGTGAACTACTTGTTCAATCAGAAAATGAGGCAACTCTGCAGGCACGTGTTGGTAGGAATGTTGACGGCATTGACCTGAACCTGTATC
ATCAGTCCCTACAACTGTTAAAACAATTTCAGGCTGATCACTTAAACAAGAGAACAAATTAGTTCACTTTTCACCTTGAGGAGGTAATCCAGCTTATCTTTGAAATTTTA
AAGTAGGAATGACTTTTTACTTTTACTTTTGCGTCTGTAAAGAAGATCTCAGTAAGTAAATTACTTTTTTTACTAATATCTTTTATTGAGTGAATATCTTTCTGTCAAAA
ATGGGGTTTTTTTTTTTTTTGCACA

Protein sequence

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MASAAIKSGALVSLKDLKPSSEFFKDGASLRVTGKLVEYSVETAIAIIVDGNVSLKIDTRHLRELTFRIGSIYQFIGELLVQSENEATLQARVGRNVDGIDLNLYHQSLQ
LLKQFQADHLNKRTN

CmoCh12G010610 (gene) of Cucurbita moschata (Rifu) v1 genome