CuGenDBv2

Gene ID	CmoCh12G010660
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr12:9824623..9829145
RNA-Seq Expression	CmoCh12G010660
Synteny	CmoCh12G010660
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586242.1 26S proteasome regulatory subunit 6A-like A, partial [Cucurbita argyrosperma subsp. sororia]

8.2e-87

87.44

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Query:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE
        SVGQLEELGTLGSQLLSGVQQGL       ELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ                  +RSLTNELE
Subjt:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE

Query:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK
        RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK
Subjt:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK

Query:  RAWKLIP
        RAWKLIP
Subjt:  RAWKLIP

KAG7021077.1 RPT5 [Cucurbita argyrosperma subsp. argyrosperma]

1.5e-88

87.68

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Query:  EEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQMRSLT
        EEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGL       ELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHD   +RSLT
Subjt:  EEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQMRSLT

Query:  NELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDD
        NELERLLDDV+IALEMENRLCASTVSDEDED             KPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDD
Subjt:  NELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDD

Query:  EILKRAWKLIP
        EI+KRAWKLIP
Subjt:  EILKRAWKLIP

XP_022938309.1 uncharacterized protein LOC111444445 [Cucurbita moschata]

8.2e-87

87.44

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Query:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE
        SVGQLEELGTLGSQLLSGVQQGL       ELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ                  +RSLTNELE
Subjt:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE

Query:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK
        RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK
Subjt:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK

Query:  RAWKLIP
        RAWKLIP
Subjt:  RAWKLIP

XP_022965408.1 uncharacterized protein LOC111465322 [Cucurbita maxima]

5.2e-81

82.61

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Query:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE
        SVGQLEELGTLGSQLLSGVQQGL       ELLRRPA+NRTSKLIENVVETNNTESLRSYFEAGCITTH+GLQ                  +RSLTNELE
Subjt:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE

Query:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK
        RLLDDVNIALEMEN   ASTVSDEDE VELN EEATIPDKKPDANEYALLMGIIKVM+KKDHIMQEKI+SGLSLKSSSGELETYRLMWSLRPYIDDEI+K
Subjt:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK

Query:  RAWKLIP
        RAWKLIP
Subjt:  RAWKLIP

XP_023537979.1 uncharacterized protein LOC111798860 [Cucurbita pepo subsp. pepo]

7.2e-83

84.21

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Query:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE
        SVGQLEELGTLGSQLLSGVQQGL       ELLRRPAINRTSKLIENV+ETNN+ESLRSYFEAGCITTHDGLQ                  +RSLTNELE
Subjt:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE

Query:  RLLDDVNIALEMENRLCASTVS--DEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEI
        RLLDDVNIALEMEN  CASTVS  DEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEI
Subjt:  RLLDDVNIALEMENRLCASTVS--DEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEI

Query:  LKRAWKLIP
        +KRAWKLIP
Subjt:  LKRAWKLIP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2B6 Uncharacterized protein

6.6e-74

68.12

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Query:  MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ----
        MEEV+ +HE +EKIF+IFKEFMASV +L+ELGTLGSQLLSG++QGL       ELLRRP+IN TSKLIENV+E +NTE+LRSY EAGCI THDG Q    
Subjt:  MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ----

Query:  --------------MRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSS
                       RSL +ELERL +DVNI LE EN LC ST+S  DED+EL++EEAT+P KKPDAN+YA+LMGI+KVM+KK+HIMQEKIISGLSLKSS
Subjt:  --------------MRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSS

Query:  SGELETYRLMWSLRPYIDDEILKRAWKLI
        SGELETY LMWSL+PYIDDEI++ AWKL+
Subjt:  SGELETYRLMWSLRPYIDDEILKRAWKLI

A0A1S4E157 uncharacterized protein LOC103495347 isoform X2

3.0e-74

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Query:  MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ----
        MEEVK +HE +EKIF+IFKEFMASV +L+ELGT GSQLLSG++QGLVI    AELLRRP+IN TSKLIENV+ET+NTE+LR+Y EAGCI THDG Q    
Subjt:  MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ----

Query:  --------------MRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSS
                       RSL +ELERL +DVNI LE EN LC ST+S  DED+EL++EEAT+P KK DAN+YALLMGI+KVM+KK+HIMQEKIISGLSLKSS
Subjt:  --------------MRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSS

Query:  SGELETYRLMWSLRPYIDDEILKRAWKLI
        SGELETY LMWSL+PYIDD I+  AWKL+
Subjt:  SGELETYRLMWSLRPYIDDEILKRAWKLI

A0A6J1D9B8 uncharacterized protein LOC111018794

8.6e-74

69.43

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Query:  MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ----
        MEEV  +H  +EKIFKIF+EFMASV +LEELGTLGS+ LSG QQGL       ELLRRPAINR+SKLIE+V+ETNNTE+L+SYFEAGCI THDG+Q    
Subjt:  MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ----

Query:  --------------MRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSS
                       RSL +ELE LL++ NIALE EN   ASTVS  DEDVEL++EEAT+PD+K DANEYAL MGIIK MVKKD+IMQEKIISGLSLKSS
Subjt:  --------------MRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSS

Query:  SGELETYRLMWSLRPYIDDEILKRAWKLI
        SGELETY +MWSLRPYIDDEI++RAWKL+
Subjt:  SGELETYRLMWSLRPYIDDEILKRAWKLI

A0A6J1FDP7 uncharacterized protein LOC111444445

4.0e-87

87.44

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Query:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE
        SVGQLEELGTLGSQLLSGVQQGL       ELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ                  +RSLTNELE
Subjt:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE

Query:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK
        RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK
Subjt:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK

Query:  RAWKLIP
        RAWKLIP
Subjt:  RAWKLIP

A0A6J1HNU3 uncharacterized protein LOC111465322

2.5e-81

82.61

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Query:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE
        SVGQLEELGTLGSQLLSGVQQGL       ELLRRPA+NRTSKLIENVVETNNTESLRSYFEAGCITTH+GLQ                  +RSLTNELE
Subjt:  SVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------------MRSLTNELE

Query:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK
        RLLDDVNIALEMEN   ASTVSDEDE VELN EEATIPDKKPDANEYALLMGIIKVM+KKDHIMQEKI+SGLSLKSSSGELETYRLMWSLRPYIDDEI+K
Subjt:  RLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILK

Query:  RAWKLIP
        RAWKLIP
Subjt:  RAWKLIP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G49645.1 unknown protein

4.7e-40

43.69

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Query:  EPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------
        E ++KI +IFK+FM  + QLEELG   +  L   QQGL         L+RP I  +SKLIEN+++ N T  L+SY EAGCI  HD  Q            
Subjt:  EPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQ------------

Query:  ------MRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIP-DKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETY
               ++L  ELERL D+  +A+E   +L   + SD  + V  ++E  T+   + P+  EYA L+ +I  M+K++++MQ+KI+  LSLKSSSGELETY
Subjt:  ------MRSLTNELERLLDDVNIALEMENRLCASTVSDEDEDVELNDEEATIP-DKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETY

Query:  RLMWSLRPYIDDEILKRAWKLI
         LMWSLRP+++DEI+ RAWK I
Subjt:  RLMWSLRPYIDDEILKRAWKLI

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGAAGTTAAAGTTGAACACGAGCCAAGAGAAAAGATTTTCAAGATTTTTAAAGAGTTCATGGCTAGCGTTGGACAGCTCGAGGAATTGGGGACTCTTGGAAGCCA
GTTGCTTTCTGGCGTTCAGCAAGGACTTGTTATTGTTTTCGCCTTTGCAGAGCTTCTTCGACGACCTGCGATAAACAGAACATCAAAGTTGATCGAGAATGTTGTTGAAA
CTAACAATACGGAGAGTCTTAGATCATACTTTGAAGCTGGATGCATCACTACTCATGACGGGTTGCAAATGAGGAGCTTAACCAATGAACTCGAGCGCCTACTCGATGAT
GTAAATATTGCATTGGAAATGGAAAATCGCCTGTGCGCTTCAACGGTCTCAGATGAAGATGAGGATGTAGAATTGAATGATGAAGAAGCAACCATTCCTGATAAGAAACC
TGATGCTAACGAATATGCTTTGTTAATGGGGATCATCAAAGTTATGGTCAAGAAAGATCACATAATGCAGGAGAAGATTATTTCTGGTCTAAGCCTCAAATCATCCTCTG
GGGAACTCGAAACATACCGCCTAATGTGGTCGTTACGACCATATATAGATGACGAAATTTTGAAACGAGCTTGGAAACTCATTCCATGA

mRNA sequence

Show/hide mRNA sequence

TTTAAAATTACCTTTAAACAAAGTCTCTTCACCGCCCGGTTCTCCACGAGGGAAGTCTCTCTTTCACTTCTCTTCCTCTCTGTTTATTACGCCGCCTCCGCCGCCGTCCG
GCCGGAATCTTCACGCTCTCTCTTCGCCATTGGTTGCTTTGAGTTCCATTACTTTGTTTCTCTTCGCCATCTCTTCTTGTTCCCTCGTAGATTAATCGGCGAACAAAACT
CTCTCTCTCTGTCTCTCTCTCGCATTCTCCCCGTTTCAAGTGAAAAACAGCGGGCGACGGAATCCGTCTTGGACCGAACAAGCTGATTCGAGTTGGAGTAATTGGAAATT
TCAAAGAAGAATTTGAATGGAAGAAGTTAAAGTTGAACACGAGCCAAGAGAAAAGATTTTCAAGATTTTTAAAGAGTTCATGGCTAGCGTTGGACAGCTCGAGGAATTGG
GGACTCTTGGAAGCCAGTTGCTTTCTGGCGTTCAGCAAGGACTTGTTATTGTTTTCGCCTTTGCAGAGCTTCTTCGACGACCTGCGATAAACAGAACATCAAAGTTGATC
GAGAATGTTGTTGAAACTAACAATACGGAGAGTCTTAGATCATACTTTGAAGCTGGATGCATCACTACTCATGACGGGTTGCAAATGAGGAGCTTAACCAATGAACTCGA
GCGCCTACTCGATGATGTAAATATTGCATTGGAAATGGAAAATCGCCTGTGCGCTTCAACGGTCTCAGATGAAGATGAGGATGTAGAATTGAATGATGAAGAAGCAACCA
TTCCTGATAAGAAACCTGATGCTAACGAATATGCTTTGTTAATGGGGATCATCAAAGTTATGGTCAAGAAAGATCACATAATGCAGGAGAAGATTATTTCTGGTCTAAGC
CTCAAATCATCCTCTGGGGAACTCGAAACATACCGCCTAATGTGGTCGTTACGACCATATATAGATGACGAAATTTTGAAACGAGCTTGGAAACTCATTCCATGAATTGT
GTTCGTTCATATTTTGCAATGAGAATAAACTGTGGGCCCCACTCGAACATCTCGTGTAATTTCATTCCCTTCAAAAGGTACTCGATCTCATTTCTGTTGATTATTAGTGA
GTTTGATACCATCTTATTGATGTTACCTAAATATTGACCTCGGTCTCGATTCACATCTCTTAGCCTAGAGTACAACAAAAGTCATCCCAGACGTACTCGATGGACTCGTT
AAGCTTGTTATGCCCTAAGATATGTTGCATGACTAGTATTAGAAGTGTTAGTTGGGTCTGATAAGCTGGTTATCACATAGTTAAGCAACA

Protein sequence

Show/hide protein sequence

MEEVKVEHEPREKIFKIFKEFMASVGQLEELGTLGSQLLSGVQQGLVIVFAFAELLRRPAINRTSKLIENVVETNNTESLRSYFEAGCITTHDGLQMRSLTNELERLLDD
VNIALEMENRLCASTVSDEDEDVELNDEEATIPDKKPDANEYALLMGIIKVMVKKDHIMQEKIISGLSLKSSSGELETYRLMWSLRPYIDDEILKRAWKLIP

CmoCh12G010660 (gene) of Cucurbita moschata (Rifu) v1 genome