CuGenDBv2

Gene ID	CmoCh12G011310
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Neurogenic locus notch-like protein
Genome location	Cmo_Chr12:10323066..10324557
RNA-Seq Expression	CmoCh12G011310
Synteny	CmoCh12G011310
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586301.1 hypothetical protein SDJN03_19034, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-81

83.52

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Query:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS
        F+DKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPN                        CSLDYGCQSAPPPVPDKPVPRNSS
Subjt:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS

Query:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
        FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS  TIGSDCAKLGIKVANVNSS+NGS GSGTGQ
Subjt:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ

XP_022937685.1 uncharacterized protein LOC111444015 [Cucurbita moschata]

1.0e-82

84.66

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Query:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS
        F+DKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPN                        CSLDYGCQSAPPPVPDKPVPRNSS
Subjt:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS

Query:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
        FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS  TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
Subjt:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ

XP_022965938.1 uncharacterized protein LOC111465666 [Cucurbita maxima]

1.0e-82

84.66

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Query:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS
        F+DKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPN                        CSLDYGCQSAPPPVPDKPVPRNSS
Subjt:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS

Query:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
        FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS  TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
Subjt:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ

XP_023521139.1 uncharacterized protein LOC111784759 [Cucurbita pepo subsp. pepo]

5.2e-82

84.09

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Query:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS
        F+DKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPN                        CSLDYGCQSAPPPVPDKPVPRNSS
Subjt:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS

Query:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
        FFNPCYWAYCGEGTCEKNNTYAHTCEC SGFYNLLNISAFPCYS  TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
Subjt:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ

XP_023537938.1 uncharacterized protein LOC111798832 [Cucurbita pepo subsp. pepo]

5.2e-82

84.09

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Query:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS
        F+DKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPN                        CSLDYGCQSAPPPVPDKPVPRNSS
Subjt:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS

Query:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
        FFNPCYWAYCGEGTCEKNNTYAHTCEC SGFYNLLNISAFPCYS  TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
Subjt:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLE2 Uncharacterized protein

3.4e-63

68.18

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Query:  DKICDEVNCGKGNCTTD-DVYPF-FKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS
        DK+C+EVNCGKGNCT   +  PF F CECD GWKRTRD+DDDL FLPCVIPN                        C+LDYGCQ APPPVP+KPVP+NSS
Subjt:  DKICDEVNCGKGNCTTD-DVYPF-FKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS

Query:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSG-GSGTG
        FFNPCYWAYCG+G C +N TY HTCEC+SG+YNLLNIS FPCYS  TIGSDCAKLGIKVANVN +DNGSG G+GTG
Subjt:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSG-GSGTG

A0A5A7VDL6 MtN26

1.7e-62

66.48

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Query:  IDKICDEVNCGKGNCTTD-DVYPF-FKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNS
        +DK+C+EVNCGKGNCT   +  PF F CECD GWKRTRD+DDDL FLPCVIPN                        C+L+YGCQ APPPVP+KPVP+NS
Subjt:  IDKICDEVNCGKGNCTTD-DVYPF-FKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNS

Query:  SFFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTG
        SFFNPCYWAYCGEG C +N TY HTCECR GFYNLLNIS FPCY+  TIGSDCAKLGIKVANVN +DN   GSG G
Subjt:  SFFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTG

A0A6J1CPY4 uncharacterized protein LOC111013088

4.0e-64

68.93

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Query:  FIDKICDEVNCGKGNCTTDDVYPF-FKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNS
        F +K+C+EVNCGKGNCT D  YPF F C CDSGWKRTRD+DDDLTFLPCVIPN                        CSL+YGCQ APPPVPDK VPRNS
Subjt:  FIDKICDEVNCGKGNCTTDDVYPF-FKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNS

Query:  SFFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
        SFF+PCYWAYCGEG C KN TY HTC C  G+YNLLN SAFPCYS  TIGSDCAKLGIKVANVNS+ NG+ G GTGQ
Subjt:  SFFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ

A0A6J1FHH1 uncharacterized protein LOC111444015

5.1e-83

84.66

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Query:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS
        F+DKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPN                        CSLDYGCQSAPPPVPDKPVPRNSS
Subjt:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS

Query:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
        FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS  TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
Subjt:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ

A0A6J1HQE9 uncharacterized protein LOC111465666

5.1e-83

84.66

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Query:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS
        F+DKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPN                        CSLDYGCQSAPPPVPDKPVPRNSS
Subjt:  FIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSS

Query:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
        FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS  TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ
Subjt:  FFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSSDNGSGGSGTGQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G14746.1 CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

4.2e-29

37.21

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Query:  MFIIFIDKICDEVNCGKGNCTTDDVYPF-FKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPV
        +F    D IC EV CGKG C       F ++CEC+ GWK+    D  L FLPC+ PN                        C+ D  C  A  P   KP 
Subjt:  MFIIFIDKICDEVNCGKGNCTTDDVYPF-FKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPV

Query:  PRN--SSFFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSS
        P++  +SFF+PC W  CG G C  +  + ++C CR G+ NL+NI+ FPC     +G DC  LGI ++N +SS
Subjt:  PRN--SSFFNPCYWAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYS--TIGSDCAKLGIKVANVNSS

Sequences

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CDS sequence

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ATGTTTATTATATTTATAGATAAAATATGCGATGAAGTGAACTGCGGAAAGGGGAATTGCACAACGGACGACGTATATCCGTTCTTCAAATGCGAGTGCGATTCCGGCTG
GAAGCGTACTCGCGACTCCGACGACGATCTCACTTTTCTTCCTTGCGTCATCCCTAACTGTAAGCTTCTCTCTCTCTCCGATTTCTCTGTTCGTCGAAAATGGCGATCGA
AATCGAATCATCCAACTCTCTGTTCTCTCGACTATGGCTGCCAGTCGGCGCCGCCGCCGGTACCAGATAAGCCAGTTCCGAGAAACTCCTCCTTCTTCAATCCTTGCTAT
TGGGCCTATTGTGGAGAAGGCACGTGTGAGAAGAACAATACGTATGCACACACGTGTGAATGCAGATCTGGCTTCTACAATCTCCTCAACATTTCTGCCTTCCCTTGCTA
TAGTACGATCGGGTCGGATTGTGCAAAACTTGGGATTAAAGTTGCTAATGTAAATTCAAGCGATAATGGAAGTGGGGGTTCTGGTACCGGACAAGATAGGTAG

mRNA sequence

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Protein sequence

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MFIIFIDKICDEVNCGKGNCTTDDVYPFFKCECDSGWKRTRDSDDDLTFLPCVIPNCKLLSLSDFSVRRKWRSKSNHPTLCSLDYGCQSAPPPVPDKPVPRNSSFFNPCY
WAYCGEGTCEKNNTYAHTCECRSGFYNLLNISAFPCYSTIGSDCAKLGIKVANVNSSDNGSGGSGTGQDR

CmoCh12G011310 (gene) of Cucurbita moschata (Rifu) v1 genome