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CmoCh12G011680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G011680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionc-Myc-binding protein homolog
Genome locationCmo_Chr12:10570903..10573671
RNA-Seq ExpressionCmoCh12G011680
SyntenyCmoCh12G011680
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR026060 - Associate of Myc 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586333.1 c-Myc-binding protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5398.26Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKS HNVT M
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

KAG7021180.1 C-Myc-binding protein [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5398.26Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKS HNVT M
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

XP_022938294.1 c-Myc-binding protein homolog [Cucurbita moschata]7.7e-55100Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

XP_022965975.1 c-Myc-binding protein homolog [Cucurbita maxima]2.6e-5093.91Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEYE+LQSEMADLQVKYDELLATHKETCKEL GL+S HNVTA 
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        S KDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

XP_023537914.1 c-Myc-binding protein homolog [Cucurbita pepo subsp. pepo]1.2e-5297.39Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKS HNVTA 
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

TrEMBL top hitse value%identityAlignment
A0A1S3C377 c-Myc-binding protein homolog2.6e-4888.7Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGH +EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQ+DKPSSALEFIQQRLGGPS AEYEKLQSEMADLQVKYDELLATHKETCKELE LKS HN+T  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        STKDTTDDE+ENDK+
Subjt:  STKDTTDDEEENDKV

A0A5A7V8R5 c-Myc-binding protein-like protein1.1e-4690.09Show/hide
Query:  QEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKD
        QEKEAKKEAFRKYLESNG+VDALTKVLVAL+EQ+DKPSSALEFIQQRLGGPS AEYEKLQSEMADLQVKYDELLATHKETCKELE LKS HN+T  STKD
Subjt:  QEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKD

Query:  TTDDEEENDKV
        TTDDE+ENDK+
Subjt:  TTDDEEENDKV

A0A6J1CPJ0 c-Myc-binding protein homolog2.0e-4583.48Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGH +EKEAKKEAFRKYLESNGVVDA TKVLVAL+EQ+DKPSSALEFIQQRLGGPS+AEYEKLQSE+ADL+VKYDELL+THKETCKELE LKS HNV   
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        ST+DTTD E++NDK+
Subjt:  STKDTTDDEEENDKV

A0A6J1FDN0 c-Myc-binding protein homolog3.7e-55100Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        STKDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

A0A6J1HQ97 c-Myc-binding protein homolog1.2e-5093.91Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEYE+LQSEMADLQVKYDELLATHKETCKEL GL+S HNVTA 
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDEEENDKV
        S KDTTDDEEENDKV
Subjt:  STKDTTDDEEENDKV

SwissProt top hitse value%identityAlignment
Q2TBP7 c-Myc-binding protein3.1e-1444.71Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE
        M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE

Q54I57 c-Myc-binding protein homolog7.6e-1346.43Show/hide
Query:  EKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELE
        +  A+KE F+ YLE +GV+DALTKVLV L+E+ DKPS ALEFI++ LG     + + L+ E ADL+ +   L     +  K+LE
Subjt:  EKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELE

Q5R7A8 c-Myc-binding protein3.1e-1444.71Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE
        M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE

Q99417 c-Myc-binding protein3.1e-1444.71Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE
        M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE

Q9EQS3 c-Myc-binding protein6.8e-1444.71Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE
        M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+  +  +K+
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGG--PSIAEYEKLQSEMADLQVKYDELLATHKE

Arabidopsis top hitse value%identityAlignment
AT2G14045.1 unknown protein1.5e-3567.89Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQ+DKPSSALEFIQQ+LGGPS+++YEKLQ+E +DLQ+KY+ELLA H+ET +EL G+KSLH  +  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDE
        S+KD  D E
Subjt:  STKDTTDDE

AT2G14045.2 unknown protein1.5e-3567.89Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM
        M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQ+DKPSSALEFIQQ+LGGPS+++YEKLQ+E +DLQ+KY+ELLA H+ET +EL G+KSLH  +  
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAM

Query:  STKDTTDDE
        S+KD  D E
Subjt:  STKDTTDDE

AT2G14045.3 unknown protein4.7e-2673.97Show/hide
Query:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVK
        M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQ+DKPSSALEFIQQ+LGGPS+++YEKLQ+E +DLQ+K
Subjt:  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCA
ACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGT
ATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGAAGGACTTAAAAGTTTGCATAACGTCACGGCAATGTCTACCAAGGATACCACTGATGACGAGGAG
GAAAACGATAAGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAACTCACGATCATGGGCCACGGTAATCGAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGG
ACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCGTTTCTTCCCCATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCA
TTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAACACGATAAGCCTTCCTCTGCTCTCGAATTTATTCAACA
AAGACTAGGCGGTCCATCTATAGCTGAATACGAGAAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAG
AGTTGGAAGGACTTAAAAGTTTGCATAACGTCACGGCAATGTCTACCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGGCTAATTGAGTTGCACAT
AGGAGGTTGATGGATTTTCTATATGACTGCCAAGAAAAAGAAAGTGATATCTATTTCCTTTAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTAT
GAAGACCATTCATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCACTTTAGTTCTAGTTTTGGTGTGATGTTTTTAGTGTACATTCGAAAATGAA
ACGGAAAACGTGCATGTGCCATGGAAAGAACATAACTATAATCTCCTTTGCTGAAACCCTCATGGACCAGCTCAAGCCCACCGCTAGCAAATATTATCCTCGTT
Protein sequenceShow/hide protein sequence
MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEE
ENDKV