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CmoCh12G011810 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G011810
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:10682302..10682632
RNA-Seq ExpressionCmoCh12G011810
SyntenyCmoCh12G011810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8126159.1 hypothetical protein FH972_020903 [Carpinus fangiana]8.7e-0441.76Show/hide
Query:  MAVLLLFLIIS-EAEGIRLLDKRMS----KEDKRNGGDLL-------------GTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
        +++LLL L++S EA+GIRL    MS    K+ + +G  L+             GTMK R  ++   K   HWLP I EDY+GPRSH+ RHH
Subjt:  MAVLLLFLIIS-EAEGIRLLDKRMS----KEDKRNGGDLL-------------GTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
KAG6586348.1 Ubiquitin-like domain-containing protein CIP73, partial [Cucurbita argyrosperma subsp. sororia]1.5e-27100Show/hide
Query:  MAVLLLFLIISEAEGIRLLDKRMSKEDKRNGGDLLGTMKWRAPNKAWRKPYSHWLPGIQEDYH
        MAVLLLFLIISEAEGIRLLDKRMSKEDKRNGGDLLGTMKWRAPNKAWRKPYSHWLPGIQEDYH
Subjt:  MAVLLLFLIISEAEGIRLLDKRMSKEDKRNGGDLLGTMKWRAPNKAWRKPYSHWLPGIQEDYH
KAG6769267.1 hypothetical protein POTOM_024887 [Populus tomentosa]1.3e-0437.63Show/hide
Query:  MAVLLLFLIISEAEGIRL-------------LDKRMSKEDKRNGGDL-------LGTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
        +++LLL  ++ +A+GIRL              +K  SKE   +GG L        GTM+ R      +K   HWLP I EDY+GPR+HK +HH
Subjt:  MAVLLLFLIISEAEGIRL-------------LDKRMSKEDKRNGGDL-------LGTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
TrEMBL top hitse value%identityAlignment
A0A0A0LJ48 Uncharacterized protein4.2e-2071.95Show/hide
Query:  MAVLLLFLIIS-EAEGIRLLDKRMSKEDK--------RNGGDLLGTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
        MAVLLLFL+I  +A+GIRLL+K MSKE K        +NGGD L TMK RAP +A RKPYSHWLPGIQEDYHGPRSHKSRHH
Subjt:  MAVLLLFLIIS-EAEGIRLLDKRMSKEDK--------RNGGDLLGTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
A0A5N6RX03 Uncharacterized protein4.2e-0441.76Show/hide
Query:  MAVLLLFLIIS-EAEGIRLLDKRMS----KEDKRNGGDLL-------------GTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
        +++LLL L++S EA+GIRL    MS    K+ + +G  L+             GTMK R  ++   K   HWLP I EDY+GPRSH+ RHH
Subjt:  MAVLLLFLIIS-EAEGIRLLDKRMS----KEDKRNGGDLL-------------GTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
A0A6M2ES64 Uncharacterized protein2.5e-0435.79Show/hide
Query:  AVLLLFLIISEAEGIRL-------------LDKRMSKEDKRNG----------GDLLGTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
        ++LLL  ++ +A+GIRL              +K  SKE    G          G   GTM+ R      +K   HWLP I EDY+GPR+HK  HH
Subjt:  AVLLLFLIISEAEGIRL-------------LDKRMSKEDKRNG----------GDLLGTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCTTCTTCTTTTCCTCATCATTTCCGAAGCTGAAGGGATTAGGTTGCTTGATAAGAGGATGAGCAAAGAGGATAAGAGAAATGGGGGAGATTTGTTGGGGAC
GATGAAATGGAGAGCTCCAAATAAGGCATGGAGAAAACCCTATTCTCATTGGCTACCTGGCATTCAAGAGGATTATCATGGTCCAAGAAGCCATAAATCTAGGCACCATT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTCTTCTTCTTTTCCTCATCATTTCCGAAGCTGAAGGGATTAGGTTGCTTGATAAGAGGATGAGCAAAGAGGATAAGAGAAATGGGGGAGATTTGTTGGGGAC
GATGAAATGGAGAGCTCCAAATAAGGCATGGAGAAAACCCTATTCTCATTGGCTACCTGGCATTCAAGAGGATTATCATGGTCCAAGAAGCCATAAATCTAGGCACCATT
AG
Protein sequenceShow/hide protein sequence
MAVLLLFLIISEAEGIRLLDKRMSKEDKRNGGDLLGTMKWRAPNKAWRKPYSHWLPGIQEDYHGPRSHKSRHH