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CmoCh12G012100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G012100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionInner membrane transport protein yjjL
Genome locationCmo_Chr12:10821561..10830839
RNA-Seq ExpressionCmoCh12G012100
SyntenyCmoCh12G012100
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586372.1 putative chloride channel-like protein CLC-g, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4698.94Show/hide
Query:  SSLCFTSNQSHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKIIGC
        SSLCFTSNQS+QEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKIIGC
Subjt:  SSLCFTSNQSHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKIIGC
XP_022946154.1 probable anion transporter 6, chloroplastic isoform X1 [Cucurbita moschata]1.3e-2368.29Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKENVK N+E+ PVL  L+VDES + GSI+K +N  S GNG+DEVGFDSNWPPWKN PDRYK+IGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
XP_022946155.1 probable anion transporter 6, chloroplastic isoform X2 [Cucurbita moschata]1.3e-2368.29Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKENVK N+E+ PVL  L+VDES + GSI+K +N  S GNG+DEVGFDSNWPPWKN PDRYK+IGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
XP_022999300.1 probable anion transporter 6, chloroplastic isoform X2 [Cucurbita maxima]1.3e-2368.29Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKEN+K NEE+ PVL  L+VDES + GSI+K +N  S GNG+DEVGFDSNWPPWKN PDRYK+IGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
XP_038891039.1 probable anion transporter 6, chloroplastic [Benincasa hispida]9.1e-2573.17Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKENVK NEEI PVL  LRVD S R  SI+KS+ND S GNG+DEVGFDSNWPPW+N PDRYKLIGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
TrEMBL top hitse value%identityAlignment
A0A0A0LG23 MFS domain-containing protein3.2e-2368.29Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKENVK NE+ISPVL  LRVD S R GS++KS+ND S G+G+DEVG + NWPPW+N PDRYKLIGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
A0A6J1G301 probable anion transporter 6, chloroplastic isoform X16.4e-2468.29Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKENVK N+E+ PVL  L+VDES + GSI+K +N  S GNG+DEVGFDSNWPPWKN PDRYK+IGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
A0A6J1G305 probable anion transporter 6, chloroplastic isoform X26.4e-2468.29Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKENVK N+E+ PVL  L+VDES + GSI+K +N  S GNG+DEVGFDSNWPPWKN PDRYK+IGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
A0A6J1KF11 probable anion transporter 6, chloroplastic isoform X26.4e-2468.29Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKEN+K NEE+ PVL  L+VDES + GSI+K +N  S GNG+DEVGFDSNWPPWKN PDRYK+IGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
A0A6J1KGN1 probable anion transporter 6, chloroplastic isoform X16.4e-2468.29Show/hide
Query:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        S +EKEN+K NEE+ PVL  L+VDES + GSI+K +N  S GNG+DEVGFDSNWPPWKN PDRYK+IGT ALAF+I NM K+
Subjt:  SHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
SwissProt top hitse value%identityAlignment
Q3E9A0 Probable anion transporter 6, chloroplastic4.3e-0966.67Show/hide
Query:  EVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        E GF+ NWPPWKN P RYKLIG  +LAF+I NM K+
Subjt:  EVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
Arabidopsis top hitse value%identityAlignment
AT5G20380.1 phosphate transporter 4;53.0e-1066.67Show/hide
Query:  EVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI
        E GF+ NWPPWKN P RYKLIG  +LAF+I NM K+
Subjt:  EVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGTCTTCTCTATGCTTCACTTCTAATCAAAGCCATCAGGAGAAAGAAAATGTCAAGGTCAACGAAGAGATTTCCCCTGTTCTTTTCCGTCTCCGTGTCGATGA
ATCGGGGCGAATTGGGTCCATTACGAAATCTAAAAACGACTCGAGCTATGGAAATGGATTGGATGAAGTGGGGTTTGATTCGAATTGGCCGCCGTGGAAGAATGCTCCTG
ATAGATATAAATTGATCGGAACCCCAGCGCTTGCCTTCATTATTTCCAACATGTATAAGATCATTGGTTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGGTCTTCTCTATGCTTCACTTCTAATCAAAGCCATCAGGAGAAAGAAAATGTCAAGGTCAACGAAGAGATTTCCCCTGTTCTTTTCCGTCTCCGTGTCGATGA
ATCGGGGCGAATTGGGTCCATTACGAAATCTAAAAACGACTCGAGCTATGGAAATGGATTGGATGAAGTGGGGTTTGATTCGAATTGGCCGCCGTGGAAGAATGCTCCTG
ATAGATATAAATTGATCGGAACCCCAGCGCTTGCCTTCATTATTTCCAACATGTATAAGATCATTGGTTGCTAGATTTCCAATGTCGCGCCTGCTTGGGGGAATTCTTTG
CTTTGTCCCAGTTGCCTGGTCGGTGGCTTGCCTAGATATTTGGAGGGAGGTTGCAGTATCGAGAGCCTTCAATAAAGGTAGACATGTATATCTCGATAGTAGCTAACTGA
GTATGAACAATTACACGAAAAATGTCAATATCGATTCTTATTTATCTTTCTGTCCTCGATAAAAAGAATTGTTTTCTTCAATAAAAGAAGAAGGATGTTGCTATAGGGAA
GCAAAAATCTTTTGGCTTAACTCAGGATCAGGCATGGG
Protein sequenceShow/hide protein sequence
MGRSSLCFTSNQSHQEKENVKVNEEISPVLFRLRVDESGRIGSITKSKNDSSYGNGLDEVGFDSNWPPWKNAPDRYKLIGTPALAFIISNMYKIIGC