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CmoCh12G012300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G012300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionmethyl-CpG-binding domain-containing protein 11-like isoform X1
Genome locationCmo_Chr12:10968524..10970710
RNA-Seq ExpressionCmoCh12G012300
SyntenyCmoCh12G012300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021238.1 hypothetical protein SDJN02_17926, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-0690.32Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKKQNS
        MAESVEKDTSNEEVLSFELPAPPGWKKK  +
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKKQNS
XP_022937827.1 methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita moschata]7.9e-06100Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDTSNEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
XP_022965862.1 methyl-CpG-binding domain-containing protein 11-like isoform X1 [Cucurbita maxima]1.8e-0596.43Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDT+NEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
XP_023537783.1 methyl-CpG-binding domain-containing protein 10-like isoform X1 [Cucurbita pepo subsp. pepo]7.9e-06100Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDTSNEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
XP_038889539.1 methyl-CpG-binding domain-containing protein 11-like [Benincasa hispida]7.4e-0485.71Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MA SV+KDT NEEV+SFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
TrEMBL top hitse value%identityAlignment
A0A6J1CQ83 methyl-CpG-binding domain-containing protein 11-like6.1e-0482.14Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MA SV+KD++NEEV+SFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
A0A6J1FCB1 methyl-CpG-binding domain-containing protein 11-like isoform X13.8e-06100Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDTSNEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
A0A6J1HLG2 methyl-CpG-binding domain-containing protein 11-like isoform X18.5e-0696.43Show/hide
Query:  MAESVEKDTSNEEVLSFELPAPPGWKKK
        MAESVEKDT+NEEVLSFELPAPPGWKKK
Subjt:  MAESVEKDTSNEEVLSFELPAPPGWKKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCAGTGGAGAAAGACACTTCGAATGAGGAGGTTCTGTCCTTCGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGCAAAACTCGATACTTATGGAAAGAAG
AGGAAGACATAAGCAAGGTGACCGGAGTGAAGTTCAACAGTTGGATGTGGGAGCCCGTCATAGTTGGTCAATGGGATAA
mRNA sequenceShow/hide mRNA sequence
CCGTCATTACTAAATTTGTCGCTGTAAATCCATTTCTCTCCTCTGTTTTAGTTGTGTGCAGCTAAGGAAGAAACCCAGAAACGCCAAATCGCGAATCCAAGTCATAAATG
GCGGAATCAGTGGAGAAAGACACTTCGAATGAGGAGGTTCTGTCCTTCGAACTCCCTGCCCCTCCTGGCTGGAAGAAAAAGCAAAACTCGATACTTATGGAAAGAAGAGG
AAGACATAAGCAAGGTGACCGGAGTGAAGTTCAACAGTTGGATGTGGGAGCCCGTCATAGTTGGTCAATGGGATAA
Protein sequenceShow/hide protein sequence
MAESVEKDTSNEEVLSFELPAPPGWKKKQNSILMERRGRHKQGDRSEVQQLDVGARHSWSMG