CuGenDBv2

Gene ID	CmoCh12G012360
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Heat shock protein DnaJ, cysteine-rich domain containing protein
Genome location	Cmo_Chr12:11001650..11010660
RNA-Seq Expression	CmoCh12G012360
Synteny	CmoCh12G012360
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586393.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-50

64.37

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA SNKPTTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

XP_004139310.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus]

9.5e-39

54.6

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFRINEAFQ+TN  +LLS EVKASDGA S K TTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAVQC+QC+GTGVNS DHFNG+FKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

XP_022938233.1 uncharacterized protein LOC111444376 [Cucurbita moschata]

2.2e-51

64.94

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

XP_022965999.1 uncharacterized protein LOC111465718 [Cucurbita maxima]

2.7e-49

63.79

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MAYSICSSTPI SFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA SNKPTTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

XP_023537582.1 uncharacterized protein LOC111798573 [Cucurbita pepo subsp. pepo]

1.7e-48

62.64

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKAS+ A S KPTTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFZ2 Uncharacterized protein

4.6e-39

54.6

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFRINEAFQ+TN  +LLS EVKASDGA S K TTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAVQC+QC+GTGVNS DHFNG+FKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

A0A5A7V544 Chaperone protein DnaJ-like

4.3e-37

52.87

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MA+SICSSTPICSFN S+ P PGV VGNSVPQKAFR+NEA QRTNP + LS E KASDGA S K TTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAV C+QC+GTGVNS DHFNG+FKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

A0A6J1CMI1 uncharacterized protein LOC111012989

1.0e-38

52.3

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MAYSICSSTPICSFNAS KP PGVFV N V +KAF+ NEAFQRTNP ++LS EVKAS G+ SN+PTTKYKSI+C DC+GN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAV C+QC+GTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

A0A6J1FIB2 uncharacterized protein LOC111444376

1.1e-51

64.94

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

A0A6J1HSG2 uncharacterized protein LOC111465718

1.3e-49

63.79

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Query:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC
        MAYSICSSTPI SFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGA SNKPTTKYKSIVCTDCDGN                    
Subjt:  MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSC

Query:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                 GAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
Subjt:  GLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

SwissProt top hits

e value

%identity

Alignment

Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

2.4e-08

29.78

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Query:  MAYSIC--SSTPICSFNASTK-PNPGVFVG-NSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLK
        MA S+C  SS P   F + +K P P  F   N       +  E  Q +  +   S EVKA   A +N   TK  S+VC +C+G                 
Subjt:  MAYSIC--SSTPICSFNASTK-PNPGVFVG-NSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLK

Query:  SGSCGLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                     G V C+QC+G GVN  DHFNG+FKAG LCWLCR
Subjt:  SGSCGLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic

2.4e-08

29.92

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Query:  KLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSCGLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCA
        K L ++ KA++   S K   K KSI+C DC+GN                                                             GA+ C 
Subjt:  KLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSCGLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCA

Query:  QCQGTGVNSEDHFNGRFKAGGLCWLCR
        +C+G GVNS D+F GRFKAG LCWLCR
Subjt:  QCQGTGVNSEDHFNGRFKAGGLCWLCR

Arabidopsis top hits

e value

%identity

Alignment

AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

1.7e-09

29.78

Show/hide

Query:  MAYSIC--SSTPICSFNASTK-PNPGVFVG-NSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLK
        MA S+C  SS P   F + +K P P  F   N       +  E  Q +  +   S EVKA   A +N   TK  S+VC +C+G                 
Subjt:  MAYSIC--SSTPICSFNASTK-PNPGVFVG-NSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLK

Query:  SGSCGLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR
                                                     G V C+QC+G GVN  DHFNG+FKAG LCWLCR
Subjt:  SGSCGLPRAPAQRITSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCR

Sequences

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CDS sequence

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ATGGCATATTCTATATGTTCTTCCACACCCATTTGCTCCTTTAATGCCTCAACCAAGCCCAACCCTGGGGTTTTTGTTGGCAACTCAGTGCCCCAGAAGGCTTTTCGGAT
CAATGAAGCGTTTCAAAGAACAAACCCCAGGAAGCTTTTGTCCGTTGAGGTCAAGGCTTCAGATGGTGCAGGTAGTAATAAACCAACCACAAAATACAAGAGCATAGTTT
GCACAGACTGCGATGGAAATGGAATTCCCCACGATGAGAAGGACGGCCTCGGTCCAATGCCACTCAAAAGTGGAAGCTGTGGGCTTCCGAGAGCCCCAGCACAGAGGATC
ACCTCTCCCTTTTCACGCACCATTGTTTACACTGTTTTCGTCTACACGTTCGTTTCTTGGGGCCGTGTCTCCAATGTTCTTGGATCAGCTCGAGGTGCTGTCCAATGTGC
TCAGTGTCAAGGAACAGGAGTGAATTCAGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAATTAACAATACTGAGGGTACCGTGATGA
ACATTGCAGAGGCAAAAGGGACATCCTGTGTGGTGGCTGTAATGGAGCAGGTACACCTTGTTGGTAAAGTTTACCACTTCAGAGCCAAGCGTCGATCGGCTGAAAATGCT
AGGCAAGTTGCCAGATCATCAATGTTGGTGGTGGCAGCCTTCGTAGGAGCACCGACTTCATCGACACCATTTGAACCAGAAGAAGGCTGCTCATTCAAAGGGAAGAGGAG
ATCCAACATCAGCTCACACTGCTTTACGAGCGTGTATAGCAAGTCGGTCGCAACTGAAGCATATTCTACGCACAAGGAATTGATTCAGCGGCATGTGGCCACAATTTCAA
GATCCCAAACTAATGAAATTCGCGGCAGCAGAACAAAACAAAGATCTCAGCTCTCTCCAAGACAATGA

mRNA sequence

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AAACAGAACGCAAAGCTCATCACAAAACTTTCTGAATTTCACTCCTCAACAACAAATCCCAAGAATTTCAAAACCCCATTTGAATGGCATATTCTATATGTTCTTCCACA
CCCATTTGCTCCTTTAATGCCTCAACCAAGCCCAACCCTGGGGTTTTTGTTGGCAACTCAGTGCCCCAGAAGGCTTTTCGGATCAATGAAGCGTTTCAAAGAACAAACCC
CAGGAAGCTTTTGTCCGTTGAGGTCAAGGCTTCAGATGGTGCAGGTAGTAATAAACCAACCACAAAATACAAGAGCATAGTTTGCACAGACTGCGATGGAAATGGAATTC
CCCACGATGAGAAGGACGGCCTCGGTCCAATGCCACTCAAAAGTGGAAGCTGTGGGCTTCCGAGAGCCCCAGCACAGAGGATCACCTCTCCCTTTTCACGCACCATTGTT
TACACTGTTTTCGTCTACACGTTCGTTTCTTGGGGCCGTGTCTCCAATGTTCTTGGATCAGCTCGAGGTGCTGTCCAATGTGCTCAGTGTCAAGGAACAGGAGTGAATTC
AGAGGATCACTTCAATGGACGGTTTAAAGCTGGTGGCTTATGCTGGTTGTGCAGAATTAACAATACTGAGGGTACCGTGATGAACATTGCAGAGGCAAAAGGGACATCCT
GTGTGGTGGCTGTAATGGAGCAGGTACACCTTGTTGGTAAAGTTTACCACTTCAGAGCCAAGCGTCGATCGGCTGAAAATGCTAGGCAAGTTGCCAGATCATCAATGTTG
GTGGTGGCAGCCTTCGTAGGAGCACCGACTTCATCGACACCATTTGAACCAGAAGAAGGCTGCTCATTCAAAGGGAAGAGGAGATCCAACATCAGCTCACACTGCTTTAC
GAGCGTGTATAGCAAGTCGGTCGCAACTGAAGCATATTCTACGCACAAGGAATTGATTCAGCGGCATGTGGCCACAATTTCAAGATCCCAAACTAATGAAATTCGCGGCA
GCAGAACAAAACAAAGATCTCAGCTCTCTCCAAGACAATGA

Protein sequence

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MAYSICSSTPICSFNASTKPNPGVFVGNSVPQKAFRINEAFQRTNPRKLLSVEVKASDGAGSNKPTTKYKSIVCTDCDGNGIPHDEKDGLGPMPLKSGSCGLPRAPAQRI
TSPFSRTIVYTVFVYTFVSWGRVSNVLGSARGAVQCAQCQGTGVNSEDHFNGRFKAGGLCWLCRINNTEGTVMNIAEAKGTSCVVAVMEQVHLVGKVYHFRAKRRSAENA
RQVARSSMLVVAAFVGAPTSSTPFEPEEGCSFKGKRRSNISSHCFTSVYSKSVATEAYSTHKELIQRHVATISRSQTNEIRGSRTKQRSQLSPRQ

CmoCh12G012360 (gene) of Cucurbita moschata (Rifu) v1 genome