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CmoCh12G012450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G012450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRegulator of rDNA transcription protein 15
Genome locationCmo_Chr12:11053171..11053475
RNA-Seq ExpressionCmoCh12G012450
SyntenyCmoCh12G012450
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PHT24662.1 hypothetical protein CQW23_35651 [Capsicum baccatum]2.7e-1286.05Show/hide
Query:  GPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        GP PCPALRANPFPK+TD FCRLPLP LFHRP+V+HLGDLMRL
Subjt:  GPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
PHT25147.1 Regulator of rDNA transcription protein 15 [Capsicum baccatum]1.6e-1279.59Show/hide
Query:  PPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        P  S  GP PCPALRANPFPK+TD FCRLPLP LFHRP+V+HLGDLMRL
Subjt:  PPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
PHT26048.1 hypothetical protein CQW23_34333 [Capsicum baccatum]1.1e-1366.67Show/hide
Query:  HFATSLG-DLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        H AT+L   + R     P  S+ GP PCPALRANPFPK+TD FCRLPLP LFHRP+V+HLGDLMRL
Subjt:  HFATSLG-DLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
PHT26831.1 hypothetical protein CQW23_33561 [Capsicum baccatum]1.9e-1370Show/hide
Query:  LGDLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        LGDL R     P  S  GP PCPALRANPFP++TD FCRLPLP LFHRP+ +HLGDLMRL
Subjt:  LGDLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
PHT27033.1 Regulator of rDNA transcription protein 15 [Capsicum baccatum]9.4e-1381.63Show/hide
Query:  PPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        P  S  GP PCPALRANPFPK TDLFCRLPLP LFHRP+V+HLGDLMRL
Subjt:  PPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
TrEMBL top hitse value%identityAlignment
A0A2G2UVB0 Uncharacterized protein1.3e-1286.05Show/hide
Query:  GPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        GP PCPALRANPFPK+TD FCRLPLP LFHRP+V+HLGDLMRL
Subjt:  GPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
A0A2G2UWU1 Regulator of rDNA transcription protein 157.8e-1379.59Show/hide
Query:  PPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        P  S  GP PCPALRANPFPK+TD FCRLPLP LFHRP+V+HLGDLMRL
Subjt:  PPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
A0A2G2UZI4 Uncharacterized protein5.4e-1466.67Show/hide
Query:  HFATSLG-DLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        H AT+L   + R     P  S+ GP PCPALRANPFPK+TD FCRLPLP LFHRP+V+HLGDLMRL
Subjt:  HFATSLG-DLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
A0A2G2V1E0 Uncharacterized protein9.2e-1470Show/hide
Query:  LGDLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        LGDL R     P  S  GP PCPALRANPFP++TD FCRLPLP LFHRP+ +HLGDLMRL
Subjt:  LGDLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
A0A2G2V230 Regulator of rDNA transcription protein 154.6e-1381.63Show/hide
Query:  PPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
        P  S  GP PCPALRANPFPK TDLFCRLPLP LFHRP+V+HLGDLMRL
Subjt:  PPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCATTTTGCGACTTCGCTTGGAGACTTGATGCGCCGTTGGACCCTACCTCCGCCTGAGTCGCTTCAAGGACCGCTCCCGTGCCCAGCTCTTAGAGCCAATCCTTT
TCCCAAGATTACGGATCTATTTTGTCGACTTCCCTTGCCTAGATTGTTCCATCGACCAAAGGTCATTCACCTTGGAGATCTGATGCGATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCATTTTGCGACTTCGCTTGGAGACTTGATGCGCCGTTGGACCCTACCTCCGCCTGAGTCGCTTCAAGGACCGCTCCCGTGCCCAGCTCTTAGAGCCAATCCTTT
TCCCAAGATTACGGATCTATTTTGTCGACTTCCCTTGCCTAGATTGTTCCATCGACCAAAGGTCATTCACCTTGGAGATCTGATGCGATTATGA
Protein sequenceShow/hide protein sequence
MIHFATSLGDLMRRWTLPPPESLQGPLPCPALRANPFPKITDLFCRLPLPRLFHRPKVIHLGDLMRL