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CmoCh12G012550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G012550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionFBD domain-containing protein
Genome locationCmo_Chr12:11125293..11127574
RNA-Seq ExpressionCmoCh12G012550
SyntenyCmoCh12G012550
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586409.1 hypothetical protein SDJN03_19142, partial [Cucurbita argyrosperma subsp. sororia]2.2e-5099.09Show/hide
Query:  MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
        MIL FVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
Subjt:  MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA

Query:  FAHGFYLVTD
        FAHGFYLVTD
Subjt:  FAHGFYLVTD

KAG7021264.1 hypothetical protein SDJN02_17952, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-4798.15Show/hide
Query:  MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
        MIL FVSIYQDLVAPSLWAEVDFPIAAAARLSPPAA RRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
Subjt:  MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA

Query:  FAHGFYLV
        FAHGFYLV
Subjt:  FAHGFYLV

XP_022938302.1 uncharacterized protein LOC111444436 [Cucurbita moschata]4.4e-51100Show/hide
Query:  MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
        MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
Subjt:  MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA

Query:  FAHGFYLVTD
        FAHGFYLVTD
Subjt:  FAHGFYLVTD

XP_022966034.1 uncharacterized protein LOC111465738 [Cucurbita maxima]4.0e-28100Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
        MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD

XP_038891091.1 uncharacterized protein LOC120080491 isoform X2 [Benincasa hispida]4.2e-2589.71Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
        MA+P+DP+SREA P+K+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD

TrEMBL top hitse value%identityAlignment
A0A0A0LF45 Uncharacterized protein2.2e-2490.77Show/hide
Query:  PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
        P DP+SREAFP+K+SAP+KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
Subjt:  PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD

A0A1S3C7Y6 uncharacterized protein LOC1034975031.0e-2491.3Show/hide
Query:  MAS-PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
        MAS P DP+SREAFP+K+SAPFKFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
Subjt:  MAS-PYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD

A0A6J1CPL9 uncharacterized protein LOC1110131381.4e-2386.76Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
        MA+PYDP +REA  KK+ AP KFLVPL+YAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD

A0A6J1FDN8 uncharacterized protein LOC1114444362.1e-51100Show/hide
Query:  MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
        MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA
Subjt:  MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGA

Query:  FAHGFYLVTD
        FAHGFYLVTD
Subjt:  FAHGFYLVTD

A0A6J1HSI9 uncharacterized protein LOC1114657381.9e-28100Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
        MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68680.1 unknown protein3.6e-1970.59Show/hide
Query:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD
        MAS  DP+      KKK AP KFLVPLIYAP LPLIR++LR  PV+RDRLF  VL GAFAHGFYLVTD
Subjt:  MASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCTAGCTTTTGTTTCAATATACCAAGATCTTGTGGCTCCATCCCTGTGGGCTGAAGTTGATTTTCCAATAGCCGCCGCCGCTCGCCTCTCGCCGCCCGCC
GCTTGCCGCCGCACCTCCGCCATGGCCTCCCCCTACGATCCCACTTCTCGGGAGGCGTTTCCTAAGAAGAAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCATC
TATGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAGAATCCTGTTGTGAGGGATCGGCTTTTCACGGCGGTTTTAGCTGGTGCTTTTGCCCATGGCTTT
TACCTGGTTACTGATTCTGGCTTCATGCAAGCTAGTTGCAACCTACAATCCGAACTAGGGATAGAACTGATATCTACGACGCCGAGAGCAAGTGATACTTGGATA
CCCATAATTCTTAGTATCATAGCTTACTCTAATGGTAATAAATACGGTACATTATCGATGGATGCCCTTTGTTTACTCAGTCTCTGA
mRNA sequenceShow/hide mRNA sequence
AAGCGGATTTGATCAGCTGATGATCCTAGCTTTTGTTTCAATATACCAAGATCTTGTGGCTCCATCCCTGTGGGCTGAAGTTGATTTTCCAATAGCCGCCGCCGC
TCGCCTCTCGCCGCCCGCCGCTTGCCGCCGCACCTCCGCCATGGCCTCCCCCTACGATCCCACTTCTCGGGAGGCGTTTCCTAAGAAGAAATCAGCCCCATTCAA
GTTCTTGGTTCCTCTCATCTATGCCCCTGTTCTTCCTCTCATTAGAATTGCGCTGCGGAAGAATCCTGTTGTGAGGGATCGGCTTTTCACGGCGGTTTTAGCTGG
TGCTTTTGCCCATGGCTTTTACCTGGTTACTGATTCTGGCTTCATGCAAGCTAGTTGCAACCTACAATCCGAACTAGGGATAGAACTGATATCTACGACGCCGAG
AGCAAGTGATACTTGGATACCCATAATTCTTAGTATCATAGCTTACTCTAATGGTAATAAATACGGTACATTATCGATGGATGCCCTTTGTTTACTCAGTCTCTG
AGCACTCTGCCTTTGAAAATTTTGTGTATTACTTGCTACACTTCATTATTGTTCAAATCAATTAATGCTTTCCTTTTTCTTCA
Protein sequenceShow/hide protein sequence
MILAFVSIYQDLVAPSLWAEVDFPIAAAARLSPPAACRRTSAMASPYDPTSREAFPKKKSAPFKFLVPLIYAPVLPLIRIALRKNPVVRDRLFTAVLAGAFAHGF
YLVTDSGFMQASCNLQSELGIELISTTPRASDTWIPIILSIIAYSNGNKYGTLSMDALCLLSL