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CmoCh12G012770 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G012770
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPeroxiredoxins prx-1 prx-2 prx-3
Genome locationCmo_Chr12:11305177..11305612
RNA-Seq ExpressionCmoCh12G012770
SyntenyCmoCh12G012770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061558.1 hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa]2.5e-3190.24Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSL V VS SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN PVASLSPK +LGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

KAG6586427.1 hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia]2.6e-36100Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

KAG7021282.1 hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-36100Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

KAG7030425.1 hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3190.24Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA+ PVASLS KE+LGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

TYK10714.1 hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa]1.9e-3190.24Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSL V VS+SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN PVASLSPK +LGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

TrEMBL top hitse value%identityAlignment
A0A061GNT6 Uncharacterized protein4.9e-1767.11Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPK
        MAS+G  ++ VS SPK  N +A    +S   GQCLCSPT HQGSFRCR HRS+SSAWMKRSKSMPAN  +ASLSPK
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPK

A0A0A0LKU3 Uncharacterized protein1.0e-3087.8Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSLSV VS SPKH NRDAET+RS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMP N PVASLSPKE+L SS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

A0A5A7V1X5 Uncharacterized protein1.2e-3190.24Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSL V VS SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN PVASLSPK +LGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

A0A5D3CHP3 Uncharacterized protein9.2e-3290.24Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSL V VS+SPKH NRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN PVASLSPK +LGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

A0A6J1G498 uncharacterized protein LOC1114506526.0e-3189.02Show/hide
Query:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS
        MAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPA+ PVASLS KE+LGSS
Subjt:  MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein2.8e-0447.62Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN
        ++S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+  N
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN

AT1G67910.1 unknown protein1.5e-0556.1Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA
        ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA

AT1G67910.2 unknown protein1.5e-0556.1Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA
        ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA

AT3G13227.1 serine-rich protein-related1.3e-0652.38Show/hide
Query:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN
        +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N
Subjt:  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAN

AT3G56500.1 serine-rich protein-related1.2e-0445.24Show/hide
Query:  KGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVAS
        K  C+C+PT H+GSFRCRLHRS++++    +  +   KP+ S
Subjt:  KGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCAATGGCAGCCTTAGCGTTGTGGTTTCCGCATCTCCTAAACACGACAATAGAGATGCTGAGACCATGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTC
GCCCACGATGCACCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCGTCGGCGTGGATGAAACGATCAAAATCAATGCCTGCCAACAAGCCTGTGGCGTCTCTTT
CTCCTAAGGAAACTCTTGGATCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATAGTTTTGATCTTCTGATTTGTATTTAAATTGTGGAAGATACTGATATATCCTAGAATGGCAACATCA
TCATGTTTATAATGTGATTAACAAATCTTTTGCTCTTTTAAATACTTGAATTTCCATACTTCTTGCAGTCTGCAGATATGGCCTCCAATGGCAGCCTTAGCGTTGTGGTT
TCCGCATCTCCTAAACACGACAATAGAGATGCTGAGACCATGAGGTCCAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGATGCACCAAGGCTCCTTTAGGTGTCG
GCTTCATCGTTCGACATCGTCGGCGTGGATGAAACGATCAAAATCAATGCCTGCCAACAAGCCTGTGGCGTCTCTTTCTCCTAAGGAAACTCTTGGATCTTCCTAA
Protein sequenceShow/hide protein sequence
MASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS