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CmoCh12G012780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G012780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:11311260..11311570
RNA-Seq ExpressionCmoCh12G012780
SyntenyCmoCh12G012780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]6.6e-1555.26Show/hide
Query:  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN
        MA++KL TV  +++M+     S+ KGD+  + C+RPC D +DD+SCY+DC+R N GAGFCYPKLP  S +KDCCCN
Subjt:  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]2.4e-1262.26Show/hide
Query:  AKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN
        AKGD+  M C++PC D +DD+SCY+DC++ N GAGFCYPKLP  S +KDCCC+
Subjt:  AKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3698.67Show/hide
Query:  MASRKLFTVFAIVMMMFYFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN
        MASRKLFTVFAIVMMMFYFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSV+NEKDCCCNN
Subjt:  MASRKLFTVFAIVMMMFYFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]5.4e-0946.05Show/hide
Query:  MASRKLFTVFAIVMMMF-YFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN
        M ++KLF V  +V + F  FASS +GD    C+ PC +   D  C   C+  ++GAGFC PKLP +S+ K CCCNN
Subjt:  MASRKLFTVFAIVMMMF-YFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]7.8e-1656.58Show/hide
Query:  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN
        MA++KL T+  +V+M+F   AS+ KGD+  + C+RPC D +DD+SCY+DC++ N GAGFCYPKLP  S +KDCCCN
Subjt:  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein2.6e-0946.05Show/hide
Query:  MASRKLFTVFAIVMMMF-YFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN
        M ++KLF V  +V + F  FASS +GD    C+ PC +   D  C   C+  ++GAGFC PKLP +S+ K CCCNN
Subjt:  MASRKLFTVFAIVMMMF-YFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN

A0A0A0LHG9 Uncharacterized protein3.8e-1656.58Show/hide
Query:  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN
        MA++KL T+  +V+M+F   AS+ KGD+  + C+RPC D +DD+SCY+DC++ N GAGFCYPKLP  S +KDCCCN
Subjt:  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN

A0A0A0LJG5 Uncharacterized protein6.5e-1654.55Show/hide
Query:  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN
        MA++KL T+  +V+++F    S+ KGD+  + C+RPC D +DD+SCY+DC+R N GAGFCYPKLP  S +KDCCCN+
Subjt:  MASRKLFTVFAIVMMMF-YFASSAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN

A0A0A0LKF5 Uncharacterized protein1.0e-1364.81Show/hide
Query:  SAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN
        +AKGD+  + C+RPC D +DD+SCY+DC+R N GAGFCYPKLP  S +KDCCCN
Subjt:  SAKGDMF-MECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCCGAAAGCTTTTCACCGTTTTCGCTATTGTCATGATGATGTTCTATTTTGCTTCATCGGCAAAAGGCGACATGTTCATGGAATGTATTCGTCCGTGTGTTGA
TGCTTTCGACGATGATTCGTGTTATGATGATTGTGTTCGTGCAAATAAAGGTGCTGGGTTTTGTTATCCTAAACTACCTTCTGTTTCGAATGAAAAGGATTGTTGTTGTA
ATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCCGAAAGCTTTTCACCGTTTTCGCTATTGTCATGATGATGTTCTATTTTGCTTCATCGGCAAAAGGCGACATGTTCATGGAATGTATTCGTCCGTGTGTTGA
TGCTTTCGACGATGATTCGTGTTATGATGATTGTGTTCGTGCAAATAAAGGTGCTGGGTTTTGTTATCCTAAACTACCTTCTGTTTCGAATGAAAAGGATTGTTGTTGTA
ATAATTGA
Protein sequenceShow/hide protein sequence
MASRKLFTVFAIVMMMFYFASSAKGDMFMECIRPCVDAFDDDSCYDDCVRANKGAGFCYPKLPSVSNEKDCCCNN