; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh12G012910 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G012910
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein SPEAR1-like
Genome locationCmo_Chr12:11383485..11385118
RNA-Seq ExpressionCmoCh12G012910
SyntenyCmoCh12G012910
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR040356 - SPEAR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586439.1 Protein SPEAR3, partial [Cucurbita argyrosperma subsp. sororia]2.1e-7796.77Show/hide
Query:  MGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQH
        MGNIDKRRS SPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYP LSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQH
Subjt:  MGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQH

Query:  FGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        FGEPNMTGHLSNPRVLDSM+KNMNTKYGSDSIGSSSQNS+SSE+HELDLELRLSI
Subjt:  FGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

KAG7021293.1 Protein SPEAR3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-8396.36Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN
        MGSGYFGEMNMGNIDKRRS SPAAA AGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYP LSAGMGEYERGSFRYGDSQPTTTSIRWN
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN

Query:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        MSNTTLETQHFGEPNMTGHLSNPRVLDSM+KNMNTKYGSDSIGSSSQNS+SSE+HELDLELRLSI
Subjt:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

XP_022938004.1 protein SPEAR1-like [Cucurbita moschata]1.7e-87100Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN
        MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN

Query:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
Subjt:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

XP_022965985.1 protein SPEAR1-like [Cucurbita maxima]3.0e-8496.97Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN
        MGSGYFGEMNMGNIDKRRS SPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYP LSAGMGEYERGSFRYGDSQPTTTSIRWN
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN

Query:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        MSNT++ETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNS+SSETHELDLELRLSI
Subjt:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

XP_023537409.1 protein SPEAR1-like [Cucurbita pepo subsp. pepo]6.0e-8598.18Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN
        MGSGYFGEMNMGNIDKRRS SPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYP LSAGMGEYERGSFRYGDSQPTTTSIRWN
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN

Query:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNS+SSETHELDLELRLSI
Subjt:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

TrEMBL top hitse value%identityAlignment
A0A0A0LFV0 SPOROCYTELESS-like EAR-containing protein 11.3e-6169.12Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSA-------------------------
        MGSGYFGEMN  NI+KRRS SP +AA GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCA Y HFYP LSA                         
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSA-------------------------

Query:  ------------GMGEYERGSFRYGDSQPTTT-SIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSM-HKNMNTKYGSDSIGSSSQNSKSSETHELDLEL
                    GMGEYERGSFRYGDSQ TTT S+RW+ SNT LETQHFG+PNM+GHL NP V DSM HKN+NTKYGSDS+GSSSQNS+SSET ELDLEL
Subjt:  ------------GMGEYERGSFRYGDSQPTTT-SIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSM-HKNMNTKYGSDSIGSSSQNSKSSETHELDLEL

Query:  RLSI
        RLSI
Subjt:  RLSI

A0A1S3C7M3 protein SPEAR11.5e-6068.97Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSA-------------------------
        MGSGYFGEMN  NI+KRRS SP AAA GRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCA Y HFYP LSA                         
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSA-------------------------

Query:  -----------GMGEYERGSFRYGDSQPTTT-SIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDS-MHKNMNTKYGSDSIGSSSQNSKSSETHELDLELR
                   GMGEYERGSFRYGDSQ TTT S+RW+ SNT LETQHFG+PNM+GHL N  V DS +H NMNTKYGSDS+GSSSQNS+SSET ELDLELR
Subjt:  -----------GMGEYERGSFRYGDSQPTTT-SIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDS-MHKNMNTKYGSDSIGSSSQNSKSSETHELDLELR

Query:  LSI
        LSI
Subjt:  LSI

A0A6J1FCT6 protein SPEAR1-like8.2e-88100Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN
        MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN

Query:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
Subjt:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

A0A6J1HQB1 protein SPEAR1-like1.4e-8496.97Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN
        MGSGYFGEMNMGNIDKRRS SPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYP LSAGMGEYERGSFRYGDSQPTTTSIRWN
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWN

Query:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        MSNT++ETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNS+SSETHELDLELRLSI
Subjt:  MSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

A0A6J1KB48 protein SPEAR3-like isoform X12.5e-5267.37Show/hide
Query:  MGSGYFGEMNMG--NIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSA-----------------------
        MGSGYFGEMNMG  NIDKRRS S   AA  RRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCA YGH YP LSA                       
Subjt:  MGSGYFGEMNMG--NIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSA-----------------------

Query:  GMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        GMGE+ERGS R GDSQP TTS+RW+ S+T LET HFG+PNMTGHL N  V DS+  N+N KYGSDS+  S QNS+SS   ELDLELRLSI
Subjt:  GMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

SwissProt top hitse value%identityAlignment
Q6IDB0 Protein SPEAR32.2e-2138.46Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGC-------------------------------------
        MGS +FG   MG        S +++ A +RG+   G +KPKQPQRGLGVAQLEKIRLHGE  C                                     
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGC-------------------------------------

Query:  ------AGYGHFYPT--LSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETH
              A YG F+P   ++A   +YER + RYGDSQP      WN S   LE+QHF EPN T H         +H++      + S+GS  QN ++SE +
Subjt:  ------AGYGHFYPT--LSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETH

Query:  ELDLELRL
        ELDLELRL
Subjt:  ELDLELRL

Q84X40 Protein SPEAR11.8e-2041.4Show/hide
Query:  MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTL-------------------SAGMGE
        MGS +FG  N+       S   S +++ A RRG+K  G EKPKQPQRGLGVAQLEKIRLHGEM C  +  + P+L                   SA  G 
Subjt:  MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTL-------------------SAGMGE

Query:  YERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        Y          Q    ++ WN S   LE+QH  EPN+T H  N           +T   S S+GS  Q+S SSE  E+DLELRLS+
Subjt:  YERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

Arabidopsis top hitse value%identityAlignment
AT2G20080.1 unknown protein1.3e-2141.4Show/hide
Query:  MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTL-------------------SAGMGE
        MGS +FG  N+       S   S +++ A RRG+K  G EKPKQPQRGLGVAQLEKIRLHGEM C  +  + P+L                   SA  G 
Subjt:  MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTL-------------------SAGMGE

Query:  YERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        Y          Q    ++ WN S   LE+QH  EPN+T H  N           +T   S S+GS  Q+S SSE  E+DLELRLS+
Subjt:  YERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

AT2G20080.2 unknown protein2.4e-2344.91Show/hide
Query:  MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIR
        MGS +FG  N+       S   S +++ A RRG+K  G EKPKQPQRGLGVAQLEKIRLHGEM C  +  + P+L   MG +          Q    ++ 
Subjt:  MGSGYFGEMNMGNIDKRRS--WSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIR

Query:  WNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI
        WN S   LE+QH  EPN+T H  N           +T   S S+GS  Q+S SSE  E+DLELRLS+
Subjt:  WNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI

AT4G28840.1 unknown protein1.5e-2238.46Show/hide
Query:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGC-------------------------------------
        MGS +FG   MG        S +++ A +RG+   G +KPKQPQRGLGVAQLEKIRLHGE  C                                     
Subjt:  MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGC-------------------------------------

Query:  ------AGYGHFYPT--LSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETH
              A YG F+P   ++A   +YER + RYGDSQP      WN S   LE+QHF EPN T H         +H++      + S+GS  QN ++SE +
Subjt:  ------AGYGHFYPT--LSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQHFGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETH

Query:  ELDLELRL
        ELDLELRL
Subjt:  ELDLELRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGTGGTTATTTTGGGGAGATGAATATGGGGAACATTGATAAGAGGAGGAGTTGGTCGCCGGCGGCTGCGGCGGCGGGGAGGAGAGGGAGGAAAGGAGGCGGCGG
AGAGAAACCGAAGCAACCGCAAAGAGGGTTGGGAGTAGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGTTGCGCTGGTTATGGCCACTTCTATCCAACTCTCT
CCGCCGGAATGGGAGAATATGAAAGAGGAAGCTTTAGGTATGGGGATTCACAGCCAACAACAACTTCTATAAGATGGAACATGAGTAATACAACCCTGGAGACCCAACAT
TTTGGGGAACCAAATATGACTGGACACCTTTCCAATCCTCGAGTACTGGATTCAATGCACAAGAACATGAATACAAAATACGGGAGTGATTCAATTGGTTCAAGCAGTCA
GAATTCTAAATCAAGTGAGACTCATGAGCTTGATTTGGAGCTAAGATTGTCGATCTAA
mRNA sequenceShow/hide mRNA sequence
GCTTAAAAAGAGGGCTTTAGAGATCTCAACCCTCCCACTTTCTCTCTCTAGTTTTTGATTTCTTTCTCTCTCTTCGTTTTATTGGAAGATAAATATGGGGAGTGGTTATT
TTGGGGAGATGAATATGGGGAACATTGATAAGAGGAGGAGTTGGTCGCCGGCGGCTGCGGCGGCGGGGAGGAGAGGGAGGAAAGGAGGCGGCGGAGAGAAACCGAAGCAA
CCGCAAAGAGGGTTGGGAGTAGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGTTGCGCTGGTTATGGCCACTTCTATCCAACTCTCTCCGCCGGAATGGGAGA
ATATGAAAGAGGAAGCTTTAGGTATGGGGATTCACAGCCAACAACAACTTCTATAAGATGGAACATGAGTAATACAACCCTGGAGACCCAACATTTTGGGGAACCAAATA
TGACTGGACACCTTTCCAATCCTCGAGTACTGGATTCAATGCACAAGAACATGAATACAAAATACGGGAGTGATTCAATTGGTTCAAGCAGTCAGAATTCTAAATCAAGT
GAGACTCATGAGCTTGATTTGGAGCTAAGATTGTCGATCTAAATGGGTTTCTATCCCTGTAATTTTACCTATTTTATGAACCATGCCCTTCATCTTTCAATAATTGCTTC
AAACACCCTCTTTTAGTTGTACATTTGCAAATCATAAAAGGGTATGGTTTGTTTGAGATTTATGAGACTATATGTTGTGAAAAGAATTCAAGGGCATGATTTGTAAATTG
GGCAAACCATAGGGTGCAATTTGTAATTATCGTTCCTATATATATAAATATTGCATGCATGCAC
Protein sequenceShow/hide protein sequence
MGSGYFGEMNMGNIDKRRSWSPAAAAAGRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAGYGHFYPTLSAGMGEYERGSFRYGDSQPTTTSIRWNMSNTTLETQH
FGEPNMTGHLSNPRVLDSMHKNMNTKYGSDSIGSSSQNSKSSETHELDLELRLSI