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CmoCh12G013010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G013010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein phosphatase 1 regulatory subunit pprA
Genome locationCmo_Chr12:11437977..11439568
RNA-Seq ExpressionCmoCh12G013010
SyntenyCmoCh12G013010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061534.1 protein phosphatase 1 regulatory subunit pprA [Cucumis melo var. makuwa]4.0e-0642.7Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAK-----DSQIEPLESIAEDVAGSREEPTTIYLKNMLVSGFLHAP
        LEE Y+S N ++++E +     LRIL++ S +    + +  L   +     D+QIE LE+IAEDVAGSRE+ TTIYL+N     FL  P
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAK-----DSQIEPLESIAEDVAGSREEPTTIYLKNMLVSGFLHAP

KAG6586447.1 hypothetical protein SDJN03_19180, partial [Cucurbita argyrosperma subsp. sororia]2.6e-10100Show/hide
Query:  MSGLEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQ
        MSGLEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQ
Subjt:  MSGLEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQ

KAG7021301.1 Protein phosphatase 1 regulatory subunit 7, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-0891.67Show/hide
Query:  SGLEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQ
        + L+EFYVSMNEVAEMEELGHFQQLRILELGSTRPQ
Subjt:  SGLEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQ

XP_022946403.1 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita moschata]5.2e-0648.1Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGS---TRPQGDNLVTSLD--VAKDSQIEPLESIAEDVAGSREEPTTIYLKN
        LEE Y+S N ++++E +     LRIL++ S   T   G   +T L+     D+QIE LESI+EDVAGSRE+ TTIYL+N
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGS---TRPQGDNLVTSLD--VAKDSQIEPLESIAEDVAGSREEPTTIYLKN

XP_023547162.1 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog [Cucurbita pepo subsp. pepo]5.2e-0648.1Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGS---TRPQGDNLVTSLD--VAKDSQIEPLESIAEDVAGSREEPTTIYLKN
        LEE Y+S N ++++E +     LRIL++ S   T   G   +T L+     D+QIE LESI+EDVAGSRE+ TTIYL+N
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGS---TRPQGDNLVTSLD--VAKDSQIEPLESIAEDVAGSREEPTTIYLKN

TrEMBL top hitse value%identityAlignment
A0A1R3IJH0 Leucine-rich repeat, typical subtype3.3e-0646.84Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAK-----DSQIEPLESIAEDVAGSREEPTTIYLKN
        LEE Y+S N +A+ME L     LR+L++ S +    N + +L   +     D+QIE LE+IAE VAGSRE+ TTIYL+N
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAK-----DSQIEPLESIAEDVAGSREEPTTIYLKN

A0A5A7V2Q2 Protein phosphatase 1 regulatory subunit pprA1.9e-0642.7Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAK-----DSQIEPLESIAEDVAGSREEPTTIYLKNMLVSGFLHAP
        LEE Y+S N ++++E +     LRIL++ S +    + +  L   +     D+QIE LE+IAEDVAGSRE+ TTIYL+N     FL  P
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAK-----DSQIEPLESIAEDVAGSREEPTTIYLKNMLVSGFLHAP

A0A6A2XMW6 Cell division cycle protein 27-like protein B-like2.5e-0645.57Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAK-----DSQIEPLESIAEDVAGSREEPTTIYLKN
        LEE Y+S N +A+ME+L     LR+L++ S +    N + +L   +     D+QIE LE+IAE V+GSRE+ TTIYL+N
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAK-----DSQIEPLESIAEDVAGSREEPTTIYLKN

A0A6J1G3P9 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog2.5e-0648.1Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGS---TRPQGDNLVTSLD--VAKDSQIEPLESIAEDVAGSREEPTTIYLKN
        LEE Y+S N ++++E +     LRIL++ S   T   G   +T L+     D+QIE LESI+EDVAGSRE+ TTIYL+N
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGS---TRPQGDNLVTSLD--VAKDSQIEPLESIAEDVAGSREEPTTIYLKN

A0A6J1KFL4 protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog2.5e-0648.1Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGS---TRPQGDNLVTSLD--VAKDSQIEPLESIAEDVAGSREEPTTIYLKN
        LEE Y+S N ++++E +     LRIL++ S   T   G   +T L+     D+QIE LESI+EDVAGSRE+ TTIYL+N
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGS---TRPQGDNLVTSLD--VAKDSQIEPLESIAEDVAGSREEPTTIYLKN

SwissProt top hitse value%identityAlignment
Q84WJ9 Protein phosphatase 1 regulatory inhibitor subunit PPP1R7 homolog1.8e-0641.77Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQG----DNLVTSLDV-AKDSQIEPLESIAEDVAGSREEPTTIYLKN
        LEE Y+S N +++ME L     LR+L++ + +        NL    D+   D+QIE LE+I E V GS+E+ TTIYL+N
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQG----DNLVTSLDV-AKDSQIEPLESIAEDVAGSREEPTTIYLKN

Arabidopsis top hitse value%identityAlignment
AT5G19680.1 Leucine-rich repeat (LRR) family protein1.3e-0741.77Show/hide
Query:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQG----DNLVTSLDV-AKDSQIEPLESIAEDVAGSREEPTTIYLKN
        LEE Y+S N +++ME L     LR+L++ + +        NL    D+   D+QIE LE+I E V GS+E+ TTIYL+N
Subjt:  LEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQG----DNLVTSLDV-AKDSQIEPLESIAEDVAGSREEPTTIYLKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGTCTCGAGGAATTTTATGTATCTATGAATGAAGTTGCTGAAATGGAAGAGCTAGGTCATTTTCAACAGTTGCGGATTCTTGAGCTTGGTTCCACTAGACCGCA
GGGTGATAATCTGGTTACTTCGTTGGATGTTGCTAAAGACAGCCAAATAGAACCACTTGAAAGCATTGCTGAGGATGTTGCTGGTTCAAGAGAGGAACCGACAACCATCT
ACCTCAAGAACATGCTAGTGTCTGGATTTCTGCATGCTCCATATCAGCTATAA
mRNA sequenceShow/hide mRNA sequence
GAAGAAGGTCTCTCTTCGTCAGAACCTCATCAATGATGCTACCGGCTGAATCGCTTTCTCGCTGGAACGCACATGTCAGGTCTCGAGGAATTTTATGTATCTATGAATGA
AGTTGCTGAAATGGAAGAGCTAGGTCATTTTCAACAGTTGCGGATTCTTGAGCTTGGTTCCACTAGACCGCAGGGTGATAATCTGGTTACTTCGTTGGATGTTGCTAAAG
ACAGCCAAATAGAACCACTTGAAAGCATTGCTGAGGATGTTGCTGGTTCAAGAGAGGAACCGACAACCATCTACCTCAAGAACATGCTAGTGTCTGGATTTCTGCATGCT
CCATATCAGCTATAAATTCTACGGGGAAAGGTATAGGTCTCATTTTATAACTTTTTAACTTCATTCAC
Protein sequenceShow/hide protein sequence
MSGLEEFYVSMNEVAEMEELGHFQQLRILELGSTRPQGDNLVTSLDVAKDSQIEPLESIAEDVAGSREEPTTIYLKNMLVSGFLHAPYQL