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CmoCh12G013380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh12G013380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr12:11619924..11620412
RNA-Seq ExpressionCmoCh12G013380
SyntenyCmoCh12G013380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586479.1 hypothetical protein SDJN03_19212, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7998.77Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF
        SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEE SSISEGSSWDEDDLARFIGDEE IF
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF

XP_022938092.1 uncharacterized protein LOC111444281 [Cucurbita moschata]8.8e-81100Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF
        SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF

XP_022965986.1 uncharacterized protein LOC111465706 [Cucurbita maxima]1.1e-7897.53Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF
        SDSSVMASVDMNGARIKLMEIDSATVEKWKLWK+EEASS+SEG SWDEDDLARFIGDEE IF
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF

XP_023538157.1 uncharacterized protein LOC111799012 [Cucurbita pepo subsp. pepo]9.7e-8098.77Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF
        SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASS+SEGSSWDEDDLARFIGDEE IF
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF

XP_038890889.1 uncharacterized protein LOC120080324 [Benincasa hispida]4.8e-6379.29Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAA-AVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFS
        M+E+RKRH+FVP E ST+KRPR A    EDV +DILAWISVEEETVGELMMLLDD EKSRPM EKVKFIDDPYSSA+IFQSSSS+VTINGNEESCGSSFS
Subjt:  MEETRKRHDFVPAENSTQKRPRAAA-AVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFS

Query:  ESDSSVMASVDMNGARIKLMEIDSATVEKWKLW------KSEEASSISEGSSWDEDDLARFIGDEEHIF
        ESDSS+MASVDMNGARIKLMEIDS TVEKWKLW      + EE S++ +G  WDEDDLARFIGDEE IF
Subjt:  ESDSSVMASVDMNGARIKLMEIDSATVEKWKLW------KSEEASSISEGSSWDEDDLARFIGDEEHIF

TrEMBL top hitse value%identityAlignment
A0A1S3CB71 uncharacterized protein LOC1034985121.6e-5673.1Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEE+R  H+FV  E ST+KR R AA  ED+ +DILAWIS+EEETVGELMMLLDD EKSRP+ EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLW---------KSEEASSISEG-SSWDEDDLARFIGDEEHI
        SDSS+MASVDMNGARIK+MEIDS TVEKWK+W         + EE S + +G  SWDEDDLARF+GDEE I
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLW---------KSEEASSISEG-SSWDEDDLARFIGDEEHI

A0A5A7UZZ9 Uncharacterized protein1.6e-5673.1Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEE+R  H+FV  E ST+KR R AA  ED+ +DILAWIS+EEETVGELMMLLDD EKSRP+ EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLW---------KSEEASSISEG-SSWDEDDLARFIGDEEHI
        SDSS+MASVDMNGARIK+MEIDS TVEKWK+W         + EE S + +G  SWDEDDLARF+GDEE I
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLW---------KSEEASSISEG-SSWDEDDLARFIGDEEHI

A0A5D3CG58 Uncharacterized protein1.6e-5673.1Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEE+R  H+FV  E ST+KR R AA  ED+ +DILAWIS+EEETVGELMMLLDD EKSRP+ EKVKFI+DPYSSA+IFQSSSS+VTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLW---------KSEEASSISEG-SSWDEDDLARFIGDEEHI
        SDSS+MASVDMNGARIK+MEIDS TVEKWK+W         + EE S + +G  SWDEDDLARF+GDEE I
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLW---------KSEEASSISEG-SSWDEDDLARFIGDEEHI

A0A6J1FD19 uncharacterized protein LOC1114442814.3e-81100Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF
        SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF

A0A6J1HN50 uncharacterized protein LOC1114657065.2e-7997.53Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
        MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSE

Query:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF
        SDSSVMASVDMNGARIKLMEIDSATVEKWKLWK+EEASS+SEG SWDEDDLARFIGDEE IF
Subjt:  SDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G56880.1 unknown protein8.9e-1535.88Show/hide
Query:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAE------------KVKFIDDPYSSAMIFQSSSSFVTIN
        MEE R + D    +N+T K       +   G         +E T  E+M L++ +  +    E            +V+FIDDPY+  ++ QSSS ++TIN
Subjt:  MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAE------------KVKFIDDPYSSAMIFQSSSSFVTIN

Query:  GNEESCGSSFSESDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDE
         NEESCG SFS+SDSSVMASVD +G      E  +   EK   W + E    +    W++D LARF+G++
Subjt:  GNEESCGSSFSESDSSVMASVDMNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAACGCGGAAGAGGCATGATTTTGTTCCGGCGGAGAACTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGCGGTGGAGGATGTCGGTAACGACATTCTGGCATG
GATTTCGGTGGAAGAGGAGACAGTCGGCGAACTCATGATGCTTCTGGACGACGCTGAGAAAAGCCGGCCGATGGCGGAGAAAGTGAAGTTCATTGACGATCCGTACTCAT
CGGCGATGATTTTTCAATCATCGTCGTCGTTCGTTACGATCAATGGAAACGAAGAGAGTTGCGGTTCGTCTTTCTCGGAATCGGACTCGTCGGTGATGGCAAGCGTGGAC
ATGAACGGAGCGAGGATCAAACTGATGGAAATCGATTCTGCGACTGTGGAGAAATGGAAGTTATGGAAGTCGGAGGAGGCGTCGTCCATATCGGAGGGATCCAGTTGGGA
TGAGGATGATTTAGCGAGGTTCATCGGCGATGAGGAACATATTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAACGCGGAAGAGGCATGATTTTGTTCCGGCGGAGAACTCGACGCAGAAGAGGCCGCGAGCGGCGGCGGCGGTGGAGGATGTCGGTAACGACATTCTGGCATG
GATTTCGGTGGAAGAGGAGACAGTCGGCGAACTCATGATGCTTCTGGACGACGCTGAGAAAAGCCGGCCGATGGCGGAGAAAGTGAAGTTCATTGACGATCCGTACTCAT
CGGCGATGATTTTTCAATCATCGTCGTCGTTCGTTACGATCAATGGAAACGAAGAGAGTTGCGGTTCGTCTTTCTCGGAATCGGACTCGTCGGTGATGGCAAGCGTGGAC
ATGAACGGAGCGAGGATCAAACTGATGGAAATCGATTCTGCGACTGTGGAGAAATGGAAGTTATGGAAGTCGGAGGAGGCGTCGTCCATATCGGAGGGATCCAGTTGGGA
TGAGGATGATTTAGCGAGGTTCATCGGCGATGAGGAACATATTTTCTGA
Protein sequenceShow/hide protein sequence
MEETRKRHDFVPAENSTQKRPRAAAAVEDVGNDILAWISVEEETVGELMMLLDDAEKSRPMAEKVKFIDDPYSSAMIFQSSSSFVTINGNEESCGSSFSESDSSVMASVD
MNGARIKLMEIDSATVEKWKLWKSEEASSISEGSSWDEDDLARFIGDEEHIF